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KJC3_006168-T1, KJC3_006168-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006168-T1
Unique NameKJC3_006168-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4895168..4896621+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006168-T1 ID=KJC3_006168-T1|Name=KJC3_006168-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1454bp|location=Sequence derived from alignment at ch4:4895168..4896621+ (Aspergillus niger KJC3)
CCCCTCTTCTTCACCTTCCCCTCTTCGGTCTCTCTGCATTCGGATCTCTC
TCGGGCATTCACCTTTACTAGATCTCTTTGCACTGTTACTCTCAATCCTT
CACTGAGCTCGCCCCGTTCAAGAACTCATCCGTCGTCTTGTCGATCGCCC
CGCCCTAAGTTGTAGACGTCATACATCTGTGCGCCTCTACGATCTGACAA
TTCCTCTCCCGACGAGGCTGGCCGACTATCACCCACCAGATCTTCCCTGA
ACAGTCTCCGATCAACGAAGCTGTCACTTTCGCCTCGAAGAGGCGCTCTG
CCCACCATGTTCGCCGGCAAGCGCCTGAGCAAGGTAAGCCATCATGCCAC
TCACCACCCCGCTCACCATCTCGACCAATGCAACTAACCCAGATTTACAT
ACAGGAGCTCTTAAAGGTACCCATTCCTCCCTGTTACCTGCAACATTCAC
CCTACCAGATCGATCACAACCACGATCTACACTTCAATGCGCCACACCTA
CACAGACCCCTAACACACAACTAACACAATCCCCCTCCACAGATGAAAGA
CCACCTTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAAT
GGCAAATGGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAG
ACCTACCGGCTCAAATTCACCTTTAGCAACAAATACCCTATCGGTAATTT
ACCCCTCACAACCACCAGCCACATTCATTTTAACTTGTTGTACAAAGAAG
AAAATGAACTAACAAGATTCATCTTATTCGTTTCAATAGAACCCCCCGAA
GTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCCC
CATCCACCCACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTCA
GCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAGT
ATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTGA
TAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTCC
ATTACGACGATGATAATGTATAGTTTTACTCGTGGAGGGGGGTGCTTCCT
AATTTTATTGGAAATTGGTAGTGGTGATGGTTGCATTAATATTGGCGCGT
GAACCTTTTGCTTATTTTCCTTTTCTCATCTTACATATTACTCAAAGTTC
CTCTTTTGTCTCACTTTCTACTTGCTTGCTTACTTGCTTGCTTGATTCTT
ATCAAGGTTACGGAGTTCACTGGAATCCGGACGGAGCGTTGGTATCATGC
ATTTCATGCGTTTACGCATGGGTTTTTTTTTCTTGTGAACTCTTTCTCAC
TTTTATGTCTACGCAATTACTACTAAATCTCCTGTCTTACATACATATTT
ACGCATATATACACATATATCGCATTGGTACTCTGATACATATCTTTTTA
ACTA
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Coding sequence (CDS) from alignment at ch4:4895168..4896621+

>KJC3_006168-T1 ID=KJC3_006168-T1|Name=KJC3_006168-T1|organism=Aspergillus niger KJC3|type=CDS|length=1896bp|location=Sequence derived from alignment at ch4:4895168..4896621+ (Aspergillus niger KJC3)
ATGTTCGCCGGCAAGCGCCTGAGCAAGGAGCTCTTAAAGATGAAAGACCA
CCTTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGC
AAATGGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACC
TACCGGCTCAAATTCACCTTTAGCAACAAATACCCTATCGAACCCCCCGA
AGTCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCC
CCATCCACCCACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTC
AGCTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAG
TATTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTG
ATAGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTC
CATTACGACGATGATAATGTATAGATGTTCGCCGGCAAGCGCCTGAGCAA
GGAGCTCTTAAAGATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCA
AGTCCGAAAACCTCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCC
AATCCGCTTTACCAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAA
CAAATACCCTATCGAACCCCCCGAAGTCCAATTCATCGAATGCCCACCCA
CCTCCGACCACCCCCGTCCGATCCCCATCCACCCACACATCTACAGCAAC
GGCATAATATGTCTCGATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCA
GACGGTCGAGAGCGTCTGCATGAGTATTCAGAGCATGTTGACGGCCAATT
CGCGCAATGAGCGGCCTCCCGGTGATAGTGAATTTGTGTCGTATAATCGG
AGGAGACCGAGGGATATTAATTTCCATTACGACGATGATAATGTATAGAT
GTTCGCCGGCAAGCGCCTGAGCAAGGAGCTCTTAAAGATGAAAGACCACC
TTCCGCCCGGGATCACAATCGTCAAGTCCGAAAACCTCGAGGAATGGCAA
ATGGACATTAAAGTCCTCGATTCCAATCCGCTTTACCAGAACGAGACCTA
CCGGCTCAAATTCACCTTTAGCAACAAATACCCTATCGAACCCCCCGAAG
TCCAATTCATCGAATGCCCACCCACCTCCGACCACCCCCGTCCGATCCCC
ATCCACCCACACATCTACAGCAACGGCATAATATGTCTCGATCTCCTCAG
CTCGGCAGGCTGGTCGCCCGTGCAGACGGTCGAGAGCGTCTGCATGAGTA
TTCAGAGCATGTTGACGGCCAATTCGCGCAATGAGCGGCCTCCCGGTGAT
AGTGAATTTGTGTCGTATAATCGGAGGAGACCGAGGGATATTAATTTCCA
TTACGACGATGATAATGTATAGATGTTCGCCGGCAAGCGCCTGAGCAAGG
AGCTCTTAAAGATGAAAGACCACCTTCCGCCCGGGATCACAATCGTCAAG
TCCGAAAACCTCGAGGAATGGCAAATGGACATTAAAGTCCTCGATTCCAA
TCCGCTTTACCAGAACGAGACCTACCGGCTCAAATTCACCTTTAGCAACA
AATACCCTATCGAACCCCCCGAAGTCCAATTCATCGAATGCCCACCCACC
TCCGACCACCCCCGTCCGATCCCCATCCACCCACACATCTACAGCAACGG
CATAATATGTCTCGATCTCCTCAGCTCGGCAGGCTGGTCGCCCGTGCAGA
CGGTCGAGAGCGTCTGCATGAGTATTCAGAGCATGTTGACGGCCAATTCG
CGCAATGAGCGGCCTCCCGGTGATAGTGAATTTGTGTCGTATAATCGGAG
GAGACCGAGGGATATTAATTTCCATTACGACGATGATAATGTATAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006168KJC3_006168Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006168-T1KJC3_006168-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006168-T1.utr5p1KJC3_006168-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006168-T1.exon1KJC3_006168-T1.exon1Aspergillus niger KJC3exon
KJC3_006168-T1.exon2KJC3_006168-T1.exon2Aspergillus niger KJC3exon
KJC3_006168-T1.exon3KJC3_006168-T1.exon3Aspergillus niger KJC3exon
KJC3_006168-T1.exon4KJC3_006168-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006168-T1.cdsKJC3_006168-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006168-T1.utr3p1KJC3_006168-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
DBxrefPFAM:PF14461
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4895168..4896621 +
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