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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4965540..4967003+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006184-T1 ID=KJC3_006184-T1|Name=KJC3_006184-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1464bp|location=Sequence derived from alignment at ch4:4965540..4967003+ (Aspergillus niger KJC3)
ATGTCGGAATACAAGGTGGAGTATGATTCTGAGCTGGTAAGTTCCCATCA
ATGATGTCATTAATGCTCCTTTTATTCTTATGGGATGGGATAGAAAGAAT
GCTAATGAGAATCTTGCTATGAAAAGGATTCCTTCCAGCTCTACCACCGA
TACGAAGAACCCCAACCGAACCTAGACTGGAAGCGCGCCGCTCTCAGCGG
GCCTGCGCTTCCGGCGCTGGGTAATGCCGTCGCGGGTGCAGTCGGCTCCG
CACTCTCGAACGTCGCTACGTATCCGTTGAGTTTGATCGTTACGCGATTG
CAGACGCAGAAGGTCAGAAAGGGTACAGAGTCGGAGTCGGGGTCGGACGC
CGAATATACCAGCGTCATTGACGCAGCTCGCAAGATCTACGCCGAGGAAG
GCATCGCCAGTTTTTACACCGGTCTAGCGCAAGATACGATAAAATCCGTT
GCGGATTCGTTTCTCTTCTTCCTTGCGTACGAGTTCTTTCGCCAGCGGAG
GATACGTGCTCGGTTTGGGAATACGCGCCGGAGCAAACATACGGTTTTAC
CGGTGCTGGATGAGTTAGCGGTGGGGGTCCTGGCAGGGGCGTTTGCGAAG
TTGTTTACGACGCCGTTGGCGAATATTGTGGCAAGGAAGCAGGCGGCGAA
GGCTTCTGTTGATGGCGGTACCAGGGAGATTGCTGCGCGGATTAGGGCTG
AGAAGGGACTACGGGGGTTTTGGTCTGGATATTCGGCGTCGTTGATACTG
ACGCTTAATCCGTCGATTACGTTTTTCTTGAACGCTGTGTTGAAGTATGC
CTTGTTGCCGAGGAATCAGCGGCAGAAGAGACCGTCTGCTGTGGCGACGT
TCTTCTTGGCGGCGGTCAGCAAGTCGATTGCCTCGTCGGTGACTTATCCG
TTTTCGATGGCGAAGACGCGGGCGCAAGTTGCGGGGAGTCAGACTACGGT
GACTGCTGATGGGGAGAAGAAGAAGGAGGATGAAGGGGTGTCGTTGATGC
CGGCGATTGTCAGTAATGTGGTTGCGATTGCGCGCACTGAAGGTGTTGCT
GCGCTTTATGCCGGGCTACCCGGGGAGGTGCTCAAGGGCTTCTTCTCGCA
TGGGTTTACGATGCTCGCGAAGGATGCGGTGTATTCGGCTATTGTGAAGA
GTTATTATCTTTTGTTGATTGCGCTTCGGAGGTATCCTACGCCGGAGGAG
CTGCTTCAGCGGGCTCGCGAACAGGCGGAGGAGTTTGCTGATGCTGCCCG
TGAGGGTGCTCGTGATTTGGCAGAGCGAACGCGGAGTGGCACGGAGGAAG
TCCTGAGTCACCAGGCTGGGGGTGTGACGGTCGATATGACTTCGAGTGAT
TTGGCAGATTCGAATGAGACGGCGGAGATGGTGGGGGATTATGTCGAGGA
TGATGGTAGTGCGAAGAGTTTGTATCATTGGTTTTGGGAGAAGGAGGGAT
ATGGCAAGGACTGA back to topCoding sequence (CDS) from alignment at ch4:4965540..4967003+ >KJC3_006184-T1 ID=KJC3_006184-T1|Name=KJC3_006184-T1|organism=Aspergillus niger KJC3|type=CDS|length=2748bp|location=Sequence derived from alignment at ch4:4965540..4967003+ (Aspergillus niger KJC3)
ATGTCGGAATACAAGGTGGAGTATGATTCTGAGCTGGATTCCTTCCAGCT
CTACCACCGATACGAAGAACCCCAACCGAACCTAGACTGGAAGCGCGCCG
CTCTCAGCGGGCCTGCGCTTCCGGCGCTGGGTAATGCCGTCGCGGGTGCA
GTCGGCTCCGCACTCTCGAACGTCGCTACGTATCCGTTGAGTTTGATCGT
TACGCGATTGCAGACGCAGAAGGTCAGAAAGGGTACAGAGTCGGAGTCGG
GGTCGGACGCCGAATATACCAGCGTCATTGACGCAGCTCGCAAGATCTAC
GCCGAGGAAGGCATCGCCAGTTTTTACACCGGTCTAGCGCAAGATACGAT
AAAATCCGTTGCGGATTCGTTTCTCTTCTTCCTTGCGTACGAGTTCTTTC
GCCAGCGGAGGATACGTGCTCGGTTTGGGAATACGCGCCGGAGCAAACAT
ACGGTTTTACCGGTGCTGGATGAGTTAGCGGTGGGGGTCCTGGCAGGGGC
GTTTGCGAAGTTGTTTACGACGCCGTTGGCGAATATTGTGGCAAGGAAGC
AGGCGGCGAAGGCTTCTGTTGATGGCGGTACCAGGGAGATTGCTGCGCGG
ATTAGGGCTGAGAAGGGACTACGGGGGTTTTGGTCTGGATATTCGGCGTC
GTTGATACTGACGCTTAATCCGTCGATTACGTTTTTCTTGAACGCTGTGT
TGAAGTATGCCTTGTTGCCGAGGAATCAGCGGCAGAAGAGACCGTCTGCT
GTGGCGACGTTCTTCTTGGCGGCGGTCAGCAAGTCGATTGCCTCGTCGGT
GACTTATCCGTTTTCGATGGCGAAGACGCGGGCGCAAGTTGCGGGGAGTC
AGACTACGGTGACTGCTGATGGGGAGAAGAAGAAGGAGGATGAAGGGGTG
TCGTTGATGCCGGCGATTGTCAGTAATGTGGTTGCGATTGCGCGCACTGA
AGGTGTTGCTGCGCTTTATGCCGGGCTACCCGGGGAGGTGCTCAAGGGCT
TCTTCTCGCATGGGTTTACGATGCTCGCGAAGGATGCGGTGTATTCGGCT
ATTGTGAAGAGTTATTATCTTTTGTTGATTGCGCTTCGGAGGTATCCTAC
GCCGGAGGAGCTGCTTCAGCGGGCTCGCGAACAGGCGGAGGAGTTTGCTG
ATGCTGCCCGTGAGGGTGCTCGTGATTTGGCAGAGCGAACGCGGAGTGGC
ACGGAGGAAGTCCTGAGTCACCAGGCTGGGGGTGTGACGGTCGATATGAC
TTCGAGTGATTTGGCAGATTCGAATGAGACGGCGGAGATGGTGGGGGATT
ATGTCGAGGATGATGGTAGTGCGAAGAGTTTGTATCATTGGTTTTGGGAG
AAGGAGGGATATGGCAAGGACTGAATGTCGGAATACAAGGTGGAGTATGA
TTCTGAGCTGGATTCCTTCCAGCTCTACCACCGATACGAAGAACCCCAAC
CGAACCTAGACTGGAAGCGCGCCGCTCTCAGCGGGCCTGCGCTTCCGGCG
CTGGGTAATGCCGTCGCGGGTGCAGTCGGCTCCGCACTCTCGAACGTCGC
TACGTATCCGTTGAGTTTGATCGTTACGCGATTGCAGACGCAGAAGGTCA
GAAAGGGTACAGAGTCGGAGTCGGGGTCGGACGCCGAATATACCAGCGTC
ATTGACGCAGCTCGCAAGATCTACGCCGAGGAAGGCATCGCCAGTTTTTA
CACCGGTCTAGCGCAAGATACGATAAAATCCGTTGCGGATTCGTTTCTCT
TCTTCCTTGCGTACGAGTTCTTTCGCCAGCGGAGGATACGTGCTCGGTTT
GGGAATACGCGCCGGAGCAAACATACGGTTTTACCGGTGCTGGATGAGTT
AGCGGTGGGGGTCCTGGCAGGGGCGTTTGCGAAGTTGTTTACGACGCCGT
TGGCGAATATTGTGGCAAGGAAGCAGGCGGCGAAGGCTTCTGTTGATGGC
GGTACCAGGGAGATTGCTGCGCGGATTAGGGCTGAGAAGGGACTACGGGG
GTTTTGGTCTGGATATTCGGCGTCGTTGATACTGACGCTTAATCCGTCGA
TTACGTTTTTCTTGAACGCTGTGTTGAAGTATGCCTTGTTGCCGAGGAAT
CAGCGGCAGAAGAGACCGTCTGCTGTGGCGACGTTCTTCTTGGCGGCGGT
CAGCAAGTCGATTGCCTCGTCGGTGACTTATCCGTTTTCGATGGCGAAGA
CGCGGGCGCAAGTTGCGGGGAGTCAGACTACGGTGACTGCTGATGGGGAG
AAGAAGAAGGAGGATGAAGGGGTGTCGTTGATGCCGGCGATTGTCAGTAA
TGTGGTTGCGATTGCGCGCACTGAAGGTGTTGCTGCGCTTTATGCCGGGC
TACCCGGGGAGGTGCTCAAGGGCTTCTTCTCGCATGGGTTTACGATGCTC
GCGAAGGATGCGGTGTATTCGGCTATTGTGAAGAGTTATTATCTTTTGTT
GATTGCGCTTCGGAGGTATCCTACGCCGGAGGAGCTGCTTCAGCGGGCTC
GCGAACAGGCGGAGGAGTTTGCTGATGCTGCCCGTGAGGGTGCTCGTGAT
TTGGCAGAGCGAACGCGGAGTGGCACGGAGGAAGTCCTGAGTCACCAGGC
TGGGGGTGTGACGGTCGATATGACTTCGAGTGATTTGGCAGATTCGAATG
AGACGGCGGAGATGGTGGGGGATTATGTCGAGGATGATGGTAGTGCGAAG
AGTTTGTATCATTGGTTTTGGGAGAAGGAGGGATATGGCAAGGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR023395 |
| DBxref | PFAM:PF00153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4965540..4967003 + |
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