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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5053724..5055732+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006216-T1 ID=KJC3_006216-T1|Name=KJC3_006216-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2009bp|location=Sequence derived from alignment at ch4:5053724..5055732+ (Aspergillus niger KJC3)
CACACATCTGGTTTTCAACCCTTTACATTCAGTCATGGCTGCTTCGAATG
CTGACGCGCAAGCGTCCGGCTTGGCTGATGGCCTGAACCCAGCGCATACC
TACATTCCCAACCAGGGCTATGTCAACCCAGACGGCTCCCTCCCCGCTAT
GGCGGGGCAAGACTCTGCGGCGCAACAAAATGAAGACGAAGAGGATGACT
ACTATGATGATATCTTCGAAGAAGAACTCGATGAAGAAAACTTCACCTCG
TCGAATCCCGCCGACCTAACGAAATCCTACAATCGCCAGCGCAAAACGAA
CGAGCTCTCTGCGGACCCGAATACTCCCAAGTGGACTTTACCGAAGACGA
ACACCCAGAAACCGTCCGTCAACACTCGCGCCTCTGTGGACGATCAAGTG
AAGTCATTGACGAAGCATGCCGGCAAGATCAAGTTGGACGATATGCAATC
AGGCATGGCGACCCGCGGTGATCGGGGTGGTGACAGGGCGGACCGCGCTA
CCTCCGAACAGGTGCTGGATCCCCGCACCCGTATGATTCTGCTACAGATG
ATCAACCGTGAGATTGTCTCCGAGATTCACGGCTGTCTGTCGACCGGTAA
AGAAGCCAACGTTTACTACTCTATCTCATACCCCGATAACGAGGAGACGC
CCCTCCACCGCGCCATCAAGGTCTACAAGACAAGCATTCTCGTCTTCAAG
GACAGAGACAAGTATGTCACTGGTGAATTCCGTTTCAGACAAGGATACAG
CAAGAGCAACAACCGGGCAATGGTCAAGCTGTGGGCGGAGAAGGAAATGC
GTAACCTGCGCCGTATCTACGCCGCCGGCATCCCCTGCCCCGAACCCATC
CACCTGCGCCTCCACGTCCTGGTCATGGGCTTCGTCGGAAACTCCAAGGG
TATCGCCGCTCCCAGACTCAAGGACGTTGAGTTCAACATCCCCGACCCCG
ATGCCAAATGGCGCGAGATCTACATGGAGTTGCTTGGCTACATGCGCGTG
ATGTACCAGACCTGCCACCTGGTCCACGCCGATCTGAGTGAATACAACAT
GCTCTACCACAAGAACAAGCTCCACATCATCGATGTCAGTCAGAGTGTTG
AGCACGACCACCCCCGCAGTTTGGAATTCCTGCGTATGGATATCAAGAAC
ATCAGCGACTTCTTCCGCCGCAAGAACGTTGACGTCCTCACCGAACGGGC
CGTCTTCGAATTCGTTATCTCAAGCGATGGCCCTACCACTGCCACGCCCG
CAGAGCCAATGCTTGAGGCCATCGAGCACCTGTTTGCCACCCGCAACAAC
AACACCGAAGGCGAGACAGAAGTCGACACTGCCGTCTTCCGCCAACAATA
CATCCCTCAAACCCTGGAACAGGTGTATGACTTCGAGCGCGACGCCGAGC
AAGTCCGCGCCGGTAAGGGTGACGACCTCGTTTACCGGGACCTTCTCGCA
GGCGAGAAGAAGAAGAAGGCAGAAGACCACGAGGAGGAGGGCGATGAGGA
AGAAGGTTCCGAAGCCGGCTCTGACGGCGGCGTATCCGTCGACGAGGGAT
CCGACTCGGAAGATGGAGAAAAAGACCCGTTCGCGAAGAAAGCGCCCCGC
GGTAAGCGGTTCGAAGATAAGGACGAGAAGCGCGACCACAAGCAAAAGGT
CAAGGAGGAGAAGCGCGAGAAGCGCGCAAATAAGATGCCGAAGCATATGA
AGAAACGTCTTGTTTCTTCGTCTTCGAGAAAGAAGAAATGAGGGAGTGAA
GTTGAGTTAAACACTTGTTTCTCTTTTCTGATATGCATGCAGGCATTTTT
GGGTGATAATTGGGCTACTATGGGAAAAACACAAAAGTCGTTCTTTGGAT
TATTTTGTTTGGAATGCACATGATCTCATGATGTTTTATGACCTTTCATT
GGGTGGGTTATGGTTCGTTGGATGCATATATATATTAAGTTCCAGTTTAT
ACTATGAGCATATAGATCTGCATATGGAGGTGTGGGAAATGCGAATTCGA
TACGTCGGG back to topCoding sequence (CDS) from alignment at ch4:5053724..5055732+ >KJC3_006216-T1 ID=KJC3_006216-T1|Name=KJC3_006216-T1|organism=Aspergillus niger KJC3|type=CDS|length=1707bp|location=Sequence derived from alignment at ch4:5053724..5055732+ (Aspergillus niger KJC3)
ATGGCTGCTTCGAATGCTGACGCGCAAGCGTCCGGCTTGGCTGATGGCCT
GAACCCAGCGCATACCTACATTCCCAACCAGGGCTATGTCAACCCAGACG
GCTCCCTCCCCGCTATGGCGGGGCAAGACTCTGCGGCGCAACAAAATGAA
GACGAAGAGGATGACTACTATGATGATATCTTCGAAGAAGAACTCGATGA
AGAAAACTTCACCTCGTCGAATCCCGCCGACCTAACGAAATCCTACAATC
GCCAGCGCAAAACGAACGAGCTCTCTGCGGACCCGAATACTCCCAAGTGG
ACTTTACCGAAGACGAACACCCAGAAACCGTCCGTCAACACTCGCGCCTC
TGTGGACGATCAAGTGAAGTCATTGACGAAGCATGCCGGCAAGATCAAGT
TGGACGATATGCAATCAGGCATGGCGACCCGCGGTGATCGGGGTGGTGAC
AGGGCGGACCGCGCTACCTCCGAACAGGTGCTGGATCCCCGCACCCGTAT
GATTCTGCTACAGATGATCAACCGTGAGATTGTCTCCGAGATTCACGGCT
GTCTGTCGACCGGTAAAGAAGCCAACGTTTACTACTCTATCTCATACCCC
GATAACGAGGAGACGCCCCTCCACCGCGCCATCAAGGTCTACAAGACAAG
CATTCTCGTCTTCAAGGACAGAGACAAGTATGTCACTGGTGAATTCCGTT
TCAGACAAGGATACAGCAAGAGCAACAACCGGGCAATGGTCAAGCTGTGG
GCGGAGAAGGAAATGCGTAACCTGCGCCGTATCTACGCCGCCGGCATCCC
CTGCCCCGAACCCATCCACCTGCGCCTCCACGTCCTGGTCATGGGCTTCG
TCGGAAACTCCAAGGGTATCGCCGCTCCCAGACTCAAGGACGTTGAGTTC
AACATCCCCGACCCCGATGCCAAATGGCGCGAGATCTACATGGAGTTGCT
TGGCTACATGCGCGTGATGTACCAGACCTGCCACCTGGTCCACGCCGATC
TGAGTGAATACAACATGCTCTACCACAAGAACAAGCTCCACATCATCGAT
GTCAGTCAGAGTGTTGAGCACGACCACCCCCGCAGTTTGGAATTCCTGCG
TATGGATATCAAGAACATCAGCGACTTCTTCCGCCGCAAGAACGTTGACG
TCCTCACCGAACGGGCCGTCTTCGAATTCGTTATCTCAAGCGATGGCCCT
ACCACTGCCACGCCCGCAGAGCCAATGCTTGAGGCCATCGAGCACCTGTT
TGCCACCCGCAACAACAACACCGAAGGCGAGACAGAAGTCGACACTGCCG
TCTTCCGCCAACAATACATCCCTCAAACCCTGGAACAGGTGTATGACTTC
GAGCGCGACGCCGAGCAAGTCCGCGCCGGTAAGGGTGACGACCTCGTTTA
CCGGGACCTTCTCGCAGGCGAGAAGAAGAAGAAGGCAGAAGACCACGAGG
AGGAGGGCGATGAGGAAGAAGGTTCCGAAGCCGGCTCTGACGGCGGCGTA
TCCGTCGACGAGGGATCCGACTCGGAAGATGGAGAAAAAGACCCGTTCGC
GAAGAAAGCGCCCCGCGGTAAGCGGTTCGAAGATAAGGACGAGAAGCGCG
ACCACAAGCAAAAGGTCAAGGAGGAGAAGCGCGAGAAGCGCGCAAATAAG
ATGCCGAAGCATATGAAGAAACGTCTTGTTTCTTCGTCTTCGAGAAAGAA
GAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006216-T1.utr5p1 | KJC3_006216-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006216-T1.utr3p1 | KJC3_006216-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR018935 |
| DBxref | InterPro:IPR017407 |
| DBxref | InterPro:IPR000687 |
| DBxref | PFAM:PF01163 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5053724..5055732 + |
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