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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5175702..5177771+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006263-T1 ID=KJC3_006263-T1|Name=KJC3_006263-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2070bp|location=Sequence derived from alignment at ch4:5175702..5177771+ (Aspergillus niger KJC3)
GGTTATTATACTCGGCTTGCTTCTCTTGCGTCGATCTCTGATCTGTCCCC
TCCTCTTCTTCCTCTCCGCTTCTTCTTCTTTGATCTAAGTTCCCGGTGTT
CGTTCTTTCATTTATCCTCCTCCACACCTCCATTTCCCAGATCTACTCTT
CTATTTACTCAATTGAAACCCCCCGCTCACCCTTGGTTTTGTTGATGTCC
CGGTGACAATTGACTTATATCGCCCGATCTATTAGCTGCAGTCTATCTTT
CACACCAACACTTATCTTTCTTGCACGGTCGCTTGGCTTAAGCCTTACAT
AAAGGTCTACTGTGCGCTTGTTACTCGTCAATCATGCTACTTCCGCGGCT
TTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCG
CCTACGATGGTGATGACAATGTCAAGAGCATTCCGGTGTGTATGCTGCTG
TCATAGGCTATAGGATGGTCTGCTAACTGGTCTCGGGATAGCTTCGCACG
CACAGTCTTTCACCGGTGGGTCGCTTATAGCTGCAGCCATGCTTGCGCAT
CATGTTAATGTCATTTCGCAGCCATACTTGGATTCCGACTTCCAAAGCCG
CTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAGTATGTTC
GCCTGTCTCGTGGTTAGATGGGAGTGAGCTTATGCTGAACAACATCTTAG
ATACATCCGTCTTACGTCTGATCGCCCGTCGCAGCAGGGATGGATCTTTT
CTCGTGTGCCTCTGACCGCGACAAACTGGGAGGTTAGTTGATACACTTTC
TATGGGTTCGGGGCAATTCTGATATGTGCAGATCGAGGTTGAATTCAAGA
TCGAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACC
AAGCAGCGCGCCACCCAGGGCCCTGTCTTCGGTTCGACGGATAACTTTGA
GGGTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTT
CGTTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGAC
CAGGCTCACGATGGAAAGGCCAATGAACTGGCGGGCTGTTCTGTAAGTAT
AGTGTGTAGAGGTGCTATGAATGTTGATCTGACTATTGCTATAGGCTCGT
GGTCTCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCA
GGACAAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGA
TTCCCTGCTTCGAGCTGACTGCCCCCGAGTACAACATCGCTATTCCCTCC
GTTGCCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCA
TGACATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCA
GCAGTGGCAGCTCTTCCCGCTCGGGCAAGGGCCGTGACACTGGCCGTGTC
AAGCGCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGT
TCTGTTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACC
GCACCAAGCACCGCTACTCGCGGTTCTAGATGTGGCAGAATGTGGAGACA
GAGAGAAACAGAAACAGAAACAGAACAGGAAATGTGTCATTTATCCTTGC
ATAGCCGTGTCGCGTTATATCAGTTGTATCTATCTATGAGCTTGCTTCCT
TGCAACGCGAAAAGTTGACGACCAACCAGTAAACTAAATGCATAGTAGGG
GTATCATAAACAACAGACAGAACATCAAGAGCGTATCTACTTCCCCCTCT
TCCTCTCCTCATTCCACATCTGATCTACAATCTGAAATACCTCCGTCACA
CTCTTCAACACCCGTTCATCAATCCCCAACTTCCCATACCGATGCTGGAT
CTTGTCCGGATGCCACCGCACCCTCTCCGTCTTCAAAAGCCCCAGCAACC
CATCTCCACCTCCATCCTTATCCTCATCATCAACAACCCTCGCGCACTCC
CTCATAAACTCCTCCACTCCCTCCCTCCCCACATCCCTCCTCTCCCCACT
CTCAACCGGCCAAAACACCA back to topCoding sequence (CDS) from alignment at ch4:5175702..5177771+ >KJC3_006263-T1 ID=KJC3_006263-T1|Name=KJC3_006263-T1|organism=Aspergillus niger KJC3|type=CDS|length=5850bp|location=Sequence derived from alignment at ch4:5175702..5177771+ (Aspergillus niger KJC3)
ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAG
CGTGCCTCTGGCCAGCGCCTACGATGGTGATGACAATGTCAAGAGCATTC
CGCTTCGCACGCACAGTCTTTCACCGCCATACTTGGATTCCGACTTCCAA
AGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAATA
CATCCGTCTTACGTCTGATCGCCCGTCGCAGCAGGGATGGATCTTTTCTC
GTGTGCCTCTGACCGCGACAAACTGGGAGATCGAGGTTGAATTCAAGATC
GAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAA
GCAGCGCGCCACCCAGGGCCCTGTCTTCGGTTCGACGGATAACTTTGAGG
GTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCG
TTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCA
GGCTCACGATGGAAAGGCCAATGAACTGGCGGGCTGTTCTGCTCGTGGTC
TCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGAC
AAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGATTCC
CTGCTTCGAGCTGACTGCCCCCGAGTACAACATCGCTATTCCCTCCGTTG
CCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGAC
ATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCAGCAG
TGGCAGCTCTTCCCGCTCGGGCAAGGGCCGTGACACTGGCCGTGTCAAGC
GCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTG
TTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACCGCAC
CAAGCACCGCTACTCGCGGTTCTAGATGCTACTTCCGCGGCTTTCGTCCC
TTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT
GGTGATGACAATGTCAAGAGCATTCCGCTTCGCACGCACAGTCTTTCACC
GCCATACTTGGATTCCGACTTCCAAAGCCGCTGGTTCGATTTTGGTGGTG
ACACGATAATTCGCGCCGACAAATACATCCGTCTTACGTCTGATCGCCCG
TCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTG
GGAGATCGAGGTTGAATTCAAGATCGAAGGGTCCGGCAACTTGCACGGCG
ATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTC
TTCGGTTCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTA
CAAGAACAACCGTCCCGGCACTTCGTTCCCCTACGTCATGGCCATGATGG
GCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAA
CTGGCGGGCTGTTCTGCTCGTGGTCTCCGTGGTGCCTCCATCCCTACCAA
GGCCCGCTTGACTTACTTCCAGGACAAGTCCTTGACCCTGGACCTGCAGT
ACAAGTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAG
TACAACATCGCTATTCCCTCCGTTGCCTACCTGGGCTTCTCTGCCGAGAC
TGGTGAGCTCAGCGATAACCATGACATCATCTCCGTCAAGGCCCAGAACC
TGTACAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAG
GGCCGTGACACTGGCCGTGTCAAGCGCCGTAAGCAGAAGGGCAGCTGGGG
ATGGTTCTTGTTCAAGACTGTTCTGTTCTTTGCTGTGGTTGTGGGAGGTT
ATGTCGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG
ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAG
CGTGCCTCTGGCCAGCGCCTACGATGGTGATGACAATGTCAAGAGCATTC
CGCTTCGCACGCACAGTCTTTCACCGCCATACTTGGATTCCGACTTCCAA
AGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAATA
CATCCGTCTTACGTCTGATCGCCCGTCGCAGCAGGGATGGATCTTTTCTC
GTGTGCCTCTGACCGCGACAAACTGGGAGATCGAGGTTGAATTCAAGATC
GAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAA
GCAGCGCGCCACCCAGGGCCCTGTCTTCGGTTCGACGGATAACTTTGAGG
GTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCG
TTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCA
GGCTCACGATGGAAAGGCCAATGAACTGGCGGGCTGTTCTGCTCGTGGTC
TCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGAC
AAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGATTCC
CTGCTTCGAGCTGACTGCCCCCGAGTACAACATCGCTATTCCCTCCGTTG
CCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGAC
ATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCAGCAG
TGGCAGCTCTTCCCGCTCGGGCAAGGGCCGTGACACTGGCCGTGTCAAGC
GCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTG
TTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACCGCAC
CAAGCACCGCTACTCGCGGTTCTAGATGCTACTTCCGCGGCTTTCGTCCC
TTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT
GGTGATGACAATGTCAAGAGCATTCCGCTTCGCACGCACAGTCTTTCACC
GCCATACTTGGATTCCGACTTCCAAAGCCGCTGGTTCGATTTTGGTGGTG
ACACGATAATTCGCGCCGACAAATACATCCGTCTTACGTCTGATCGCCCG
TCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTG
GGAGATCGAGGTTGAATTCAAGATCGAAGGGTCCGGCAACTTGCACGGCG
ATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTC
TTCGGTTCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTA
CAAGAACAACCGTCCCGGCACTTCGTTCCCCTACGTCATGGCCATGATGG
GCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAA
CTGGCGGGCTGTTCTGCTCGTGGTCTCCGTGGTGCCTCCATCCCTACCAA
GGCCCGCTTGACTTACTTCCAGGACAAGTCCTTGACCCTGGACCTGCAGT
ACAAGTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAG
TACAACATCGCTATTCCCTCCGTTGCCTACCTGGGCTTCTCTGCCGAGAC
TGGTGAGCTCAGCGATAACCATGACATCATCTCCGTCAAGGCCCAGAACC
TGTACAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAG
GGCCGTGACACTGGCCGTGTCAAGCGCCGTAAGCAGAAGGGCAGCTGGGG
ATGGTTCTTGTTCAAGACTGTTCTGTTCTTTGCTGTGGTTGTGGGAGGTT
ATGTCGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG
ATGCTACTTCCGCGGCTTTCGTCCCTTTTGTGCTGGGCTGGCTTGGCCAG
CGTGCCTCTGGCCAGCGCCTACGATGGTGATGACAATGTCAAGAGCATTC
CGCTTCGCACGCACAGTCTTTCACCGCCATACTTGGATTCCGACTTCCAA
AGCCGCTGGTTCGATTTTGGTGGTGACACGATAATTCGCGCCGACAAATA
CATCCGTCTTACGTCTGATCGCCCGTCGCAGCAGGGATGGATCTTTTCTC
GTGTGCCTCTGACCGCGACAAACTGGGAGATCGAGGTTGAATTCAAGATC
GAAGGGTCCGGCAACTTGCACGGCGATGGCTTCGCCATGTGGCTCACCAA
GCAGCGCGCCACCCAGGGCCCTGTCTTCGGTTCGACGGATAACTTTGAGG
GTCTGGGTATCTTCTTTGACACGTACAAGAACAACCGTCCCGGCACTTCG
TTCCCCTACGTCATGGCCATGATGGGCGATGGCCAGACTACCTACGACCA
GGCTCACGATGGAAAGGCCAATGAACTGGCGGGCTGTTCTGCTCGTGGTC
TCCGTGGTGCCTCCATCCCTACCAAGGCCCGCTTGACTTACTTCCAGGAC
AAGTCCTTGACCCTGGACCTGCAGTACAAGTCCGAGGACAGCTGGATTCC
CTGCTTCGAGCTGACTGCCCCCGAGTACAACATCGCTATTCCCTCCGTTG
CCTACCTGGGCTTCTCTGCCGAGACTGGTGAGCTCAGCGATAACCATGAC
ATCATCTCCGTCAAGGCCCAGAACCTGTACAGCGTTGGTGGCGGCAGCAG
TGGCAGCTCTTCCCGCTCGGGCAAGGGCCGTGACACTGGCCGTGTCAAGC
GCCGTAAGCAGAAGGGCAGCTGGGGATGGTTCTTGTTCAAGACTGTTCTG
TTCTTTGCTGTGGTTGTGGGAGGTTATGTCGGGTACACTGCGTACCGCAC
CAAGCACCGCTACTCGCGGTTCTAGATGCTACTTCCGCGGCTTTCGTCCC
TTTTGTGCTGGGCTGGCTTGGCCAGCGTGCCTCTGGCCAGCGCCTACGAT
GGTGATGACAATGTCAAGAGCATTCCGCTTCGCACGCACAGTCTTTCACC
GCCATACTTGGATTCCGACTTCCAAAGCCGCTGGTTCGATTTTGGTGGTG
ACACGATAATTCGCGCCGACAAATACATCCGTCTTACGTCTGATCGCCCG
TCGCAGCAGGGATGGATCTTTTCTCGTGTGCCTCTGACCGCGACAAACTG
GGAGATCGAGGTTGAATTCAAGATCGAAGGGTCCGGCAACTTGCACGGCG
ATGGCTTCGCCATGTGGCTCACCAAGCAGCGCGCCACCCAGGGCCCTGTC
TTCGGTTCGACGGATAACTTTGAGGGTCTGGGTATCTTCTTTGACACGTA
CAAGAACAACCGTCCCGGCACTTCGTTCCCCTACGTCATGGCCATGATGG
GCGATGGCCAGACTACCTACGACCAGGCTCACGATGGAAAGGCCAATGAA
CTGGCGGGCTGTTCTGCTCGTGGTCTCCGTGGTGCCTCCATCCCTACCAA
GGCCCGCTTGACTTACTTCCAGGACAAGTCCTTGACCCTGGACCTGCAGT
ACAAGTCCGAGGACAGCTGGATTCCCTGCTTCGAGCTGACTGCCCCCGAG
TACAACATCGCTATTCCCTCCGTTGCCTACCTGGGCTTCTCTGCCGAGAC
TGGTGAGCTCAGCGATAACCATGACATCATCTCCGTCAAGGCCCAGAACC
TGTACAGCGTTGGTGGCGGCAGCAGTGGCAGCTCTTCCCGCTCGGGCAAG
GGCCGTGACACTGGCCGTGTCAAGCGCCGTAAGCAGAAGGGCAGCTGGGG
ATGGTTCTTGTTCAAGACTGTTCTGTTCTTTGCTGTGGTTGTGGGAGGTT
ATGTCGGGTACACTGCGTACCGCACCAAGCACCGCTACTCGCGGTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006263-T1.utr5p1 | KJC3_006263-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006263-T1.utr3p1 | KJC3_006263-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| Note | BUSCO:EOG092628SP |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR005052 |
| DBxref | PFAM:PF03388 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5175702..5177771 + |
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