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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5206503..5207690- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006272-T1 ID=KJC3_006272-T1|Name=KJC3_006272-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1188bp|location=Sequence derived from alignment at ch4:5206503..5207690- (Aspergillus niger KJC3)
ATGGCGACACAAAAGCCCAAGTACCCTTTGGGCAAGATTGAGCCCAACTC
GGCCAAGTATTTTGCGAGTTGCACCCTTGGAGGAATAATTGGTGAGTAGT
CTACCTGCTAGCCCTATTTACAATAGCTTCCAGGATCCCAAGACTAACCT
CCTCGAACAGCCTGCGGTACGTATAATCATACAATCTCCGACTACGTCCA
CAACCACATCCCCGATCCTAATTCTAATCCCTACCACAGGCCCAACCCAC
ACAGCCGTCACCCCCCTTGATCTAGTAAAATGTCGCCGCCAAGTCGATCC
CAAAATTTACACCTCCAACCTCTCCGCCTGGCGCTCCATCATATCTAAAG
AAGGCCTCCGCGGCATCTTCTTTGGCTGGACCCCCACCTTTGTTGGCTAC
TCCCTCCAAGGCGCCGGCAAATACGGCTTCTACGAGTACTTCAAATACCT
CTACGGGGACCACCTATTCCCCAATGCGAACCGCACCGTCGTCTTCCTGG
GCGCCAGTGCCTCGGCTGAATTCTTCGCTGATATGGCCCTCTGTCCAATG
GAGGCTATCAAGGTGCGCATGCAGACAACGCTGCCGCCGTTTGCGCATAC
ATTGCGCGAGGGATGGAGCAAAATCGTGGCGCAAGAGGGCATGTCCGGAT
TGTACAAGGGCTTGTATCCGCTGTGGGCGAGACAGATCCCCTATACGATG
ACTAAGTTTGCGACGTTTGAGGAGACGGTGAAGTTTATCTATAAGACGCT
GGGCAAGCCCAAGGAGCAGTATAATGGGTTGCAGCAGACTGGGGTGAGCT
TTTTGGGAGGTTATATTGCGGGCATCTTCTGTGCTATTGTTAGTCATCCT
GCGGATGTTATGGTGAGTAAGTTGAATGCGGATCGGAAAGGTGAGTTATC
CTCTCTTATTGTTGTATACTGGTTTGGGGTTGATGGCTGATGGTGTGTTA
GCTGGCGAGGGAGCTATGACTGCTGTGTCGCGGATCTATAGCAACATTGG
ATTCTCGGGCTTGTGGAATGGATTGCCCGTGAGAATTGTCATGCTGGGTA
CATTGACTGGGTTCCAATGGTTGATGTAAGTGACGATGATAATGTTGTGA
TAAGGCTGAGGGCTGGATGCTGACGCAGATATATAGTTACGACTCGTTCA
AGGTGTTCCTGGGATTGCCTACTACTGGTGGACATTAG back to topCoding sequence (CDS) from alignment at ch4:5206503..5207690- >KJC3_006272-T1 ID=KJC3_006272-T1|Name=KJC3_006272-T1|organism=Aspergillus niger KJC3|type=CDS|length=4620bp|location=Sequence derived from alignment at ch4:5206503..5207690- (Aspergillus niger KJC3)
TTACGACTCGTTCAAGGTGTTCCTGGGATTGCCTACTACTGGTGGACATT
AGCTGGCGAGGGAGCTATGACTGCTGTGTCGCGGATCTATAGCAACATTG
GATTCTCGGGCTTGTGGAATGGATTGCCCGTGAGAATTGTCATGCTGGGT
ACATTGACTGGGTTCCAATGGTTGATGCCCAACCCACACAGCCGTCACCC
CCCTTGATCTAGTAAAATGTCGCCGCCAAGTCGATCCCAAAATTTACACC
TCCAACCTCTCCGCCTGGCGCTCCATCATATCTAAAGAAGGCCTCCGCGG
CATCTTCTTTGGCTGGACCCCCACCTTTGTTGGCTACTCCCTCCAAGGCG
CCGGCAAATACGGCTTCTACGAGTACTTCAAATACCTCTACGGGGACCAC
CTATTCCCCAATGCGAACCGCACCGTCGTCTTCCTGGGCGCCAGTGCCTC
GGCTGAATTCTTCGCTGATATGGCCCTCTGTCCAATGGAGGCTATCAAGG
TGCGCATGCAGACAACGCTGCCGCCGTTTGCGCATACATTGCGCGAGGGA
TGGAGCAAAATCGTGGCGCAAGAGGGCATGTCCGGATTGTACAAGGGCTT
GTATCCGCTGTGGGCGAGACAGATCCCCTATACGATGACTAAGTTTGCGA
CGTTTGAGGAGACGGTGAAGTTTATCTATAAGACGCTGGGCAAGCCCAAG
GAGCAGTATAATGGGTTGCAGCAGACTGGGGTGAGCTTTTTGGGAGGTTA
TATTGCGGGCATCTTCTGTGCTATTGTTAGTCATCCTGCGGATGTTATGG
TGAGTAAGTTGAATGCGGATCGGAAAGCCTGCGATGGCGACACAAAAGCC
CAAGTACCCTTTGGGCAAGATTGAGCCCAACTCGGCCAAGTATTTTGCGA
GTTGCACCCTTGGAGGAATAATTGTTACGACTCGTTCAAGGTGTTCCTGG
GATTGCCTACTACTGGTGGACATTAGCTGGCGAGGGAGCTATGACTGCTG
TGTCGCGGATCTATAGCAACATTGGATTCTCGGGCTTGTGGAATGGATTG
CCCGTGAGAATTGTCATGCTGGGTACATTGACTGGGTTCCAATGGTTGAT
GCCCAACCCACACAGCCGTCACCCCCCTTGATCTAGTAAAATGTCGCCGC
CAAGTCGATCCCAAAATTTACACCTCCAACCTCTCCGCCTGGCGCTCCAT
CATATCTAAAGAAGGCCTCCGCGGCATCTTCTTTGGCTGGACCCCCACCT
TTGTTGGCTACTCCCTCCAAGGCGCCGGCAAATACGGCTTCTACGAGTAC
TTCAAATACCTCTACGGGGACCACCTATTCCCCAATGCGAACCGCACCGT
CGTCTTCCTGGGCGCCAGTGCCTCGGCTGAATTCTTCGCTGATATGGCCC
TCTGTCCAATGGAGGCTATCAAGGTGCGCATGCAGACAACGCTGCCGCCG
TTTGCGCATACATTGCGCGAGGGATGGAGCAAAATCGTGGCGCAAGAGGG
CATGTCCGGATTGTACAAGGGCTTGTATCCGCTGTGGGCGAGACAGATCC
CCTATACGATGACTAAGTTTGCGACGTTTGAGGAGACGGTGAAGTTTATC
TATAAGACGCTGGGCAAGCCCAAGGAGCAGTATAATGGGTTGCAGCAGAC
TGGGGTGAGCTTTTTGGGAGGTTATATTGCGGGCATCTTCTGTGCTATTG
TTAGTCATCCTGCGGATGTTATGGTGAGTAAGTTGAATGCGGATCGGAAA
GCCTGCGATGGCGACACAAAAGCCCAAGTACCCTTTGGGCAAGATTGAGC
CCAACTCGGCCAAGTATTTTGCGAGTTGCACCCTTGGAGGAATAATTGTT
ACGACTCGTTCAAGGTGTTCCTGGGATTGCCTACTACTGGTGGACATTAG
CTGGCGAGGGAGCTATGACTGCTGTGTCGCGGATCTATAGCAACATTGGA
TTCTCGGGCTTGTGGAATGGATTGCCCGTGAGAATTGTCATGCTGGGTAC
ATTGACTGGGTTCCAATGGTTGATGCCCAACCCACACAGCCGTCACCCCC
CTTGATCTAGTAAAATGTCGCCGCCAAGTCGATCCCAAAATTTACACCTC
CAACCTCTCCGCCTGGCGCTCCATCATATCTAAAGAAGGCCTCCGCGGCA
TCTTCTTTGGCTGGACCCCCACCTTTGTTGGCTACTCCCTCCAAGGCGCC
GGCAAATACGGCTTCTACGAGTACTTCAAATACCTCTACGGGGACCACCT
ATTCCCCAATGCGAACCGCACCGTCGTCTTCCTGGGCGCCAGTGCCTCGG
CTGAATTCTTCGCTGATATGGCCCTCTGTCCAATGGAGGCTATCAAGGTG
CGCATGCAGACAACGCTGCCGCCGTTTGCGCATACATTGCGCGAGGGATG
GAGCAAAATCGTGGCGCAAGAGGGCATGTCCGGATTGTACAAGGGCTTGT
ATCCGCTGTGGGCGAGACAGATCCCCTATACGATGACTAAGTTTGCGACG
TTTGAGGAGACGGTGAAGTTTATCTATAAGACGCTGGGCAAGCCCAAGGA
GCAGTATAATGGGTTGCAGCAGACTGGGGTGAGCTTTTTGGGAGGTTATA
TTGCGGGCATCTTCTGTGCTATTGTTAGTCATCCTGCGGATGTTATGGTG
AGTAAGTTGAATGCGGATCGGAAAGCCTGCGATGGCGACACAAAAGCCCA
AGTACCCTTTGGGCAAGATTGAGCCCAACTCGGCCAAGTATTTTGCGAGT
TGCACCCTTGGAGGAATAATTGTTACGACTCGTTCAAGGTGTTCCTGGGA
TTGCCTACTACTGGTGGACATTAGCTGGCGAGGGAGCTATGACTGCTGTG
TCGCGGATCTATAGCAACATTGGATTCTCGGGCTTGTGGAATGGATTGCC
CGTGAGAATTGTCATGCTGGGTACATTGACTGGGTTCCAATGGTTGATGC
CCAACCCACACAGCCGTCACCCCCCTTGATCTAGTAAAATGTCGCCGCCA
AGTCGATCCCAAAATTTACACCTCCAACCTCTCCGCCTGGCGCTCCATCA
TATCTAAAGAAGGCCTCCGCGGCATCTTCTTTGGCTGGACCCCCACCTTT
GTTGGCTACTCCCTCCAAGGCGCCGGCAAATACGGCTTCTACGAGTACTT
CAAATACCTCTACGGGGACCACCTATTCCCCAATGCGAACCGCACCGTCG
TCTTCCTGGGCGCCAGTGCCTCGGCTGAATTCTTCGCTGATATGGCCCTC
TGTCCAATGGAGGCTATCAAGGTGCGCATGCAGACAACGCTGCCGCCGTT
TGCGCATACATTGCGCGAGGGATGGAGCAAAATCGTGGCGCAAGAGGGCA
TGTCCGGATTGTACAAGGGCTTGTATCCGCTGTGGGCGAGACAGATCCCC
TATACGATGACTAAGTTTGCGACGTTTGAGGAGACGGTGAAGTTTATCTA
TAAGACGCTGGGCAAGCCCAAGGAGCAGTATAATGGGTTGCAGCAGACTG
GGGTGAGCTTTTTGGGAGGTTATATTGCGGGCATCTTCTGTGCTATTGTT
AGTCATCCTGCGGATGTTATGGTGAGTAAGTTGAATGCGGATCGGAAAGC
CTGCGATGGCGACACAAAAGCCCAAGTACCCTTTGGGCAAGATTGAGCCC
AACTCGGCCAAGTATTTTGCGAGTTGCACCCTTGGAGGAATAATTGTTAC
GACTCGTTCAAGGTGTTCCTGGGATTGCCTACTACTGGTGGACATTAGCT
GGCGAGGGAGCTATGACTGCTGTGTCGCGGATCTATAGCAACATTGGATT
CTCGGGCTTGTGGAATGGATTGCCCGTGAGAATTGTCATGCTGGGTACAT
TGACTGGGTTCCAATGGTTGATGCCCAACCCACACAGCCGTCACCCCCCT
TGATCTAGTAAAATGTCGCCGCCAAGTCGATCCCAAAATTTACACCTCCA
ACCTCTCCGCCTGGCGCTCCATCATATCTAAAGAAGGCCTCCGCGGCATC
TTCTTTGGCTGGACCCCCACCTTTGTTGGCTACTCCCTCCAAGGCGCCGG
CAAATACGGCTTCTACGAGTACTTCAAATACCTCTACGGGGACCACCTAT
TCCCCAATGCGAACCGCACCGTCGTCTTCCTGGGCGCCAGTGCCTCGGCT
GAATTCTTCGCTGATATGGCCCTCTGTCCAATGGAGGCTATCAAGGTGCG
CATGCAGACAACGCTGCCGCCGTTTGCGCATACATTGCGCGAGGGATGGA
GCAAAATCGTGGCGCAAGAGGGCATGTCCGGATTGTACAAGGGCTTGTAT
CCGCTGTGGGCGAGACAGATCCCCTATACGATGACTAAGTTTGCGACGTT
TGAGGAGACGGTGAAGTTTATCTATAAGACGCTGGGCAAGCCCAAGGAGC
AGTATAATGGGTTGCAGCAGACTGGGGTGAGCTTTTTGGGAGGTTATATT
GCGGGCATCTTCTGTGCTATTGTTAGTCATCCTGCGGATGTTATGGTGAG
TAAGTTGAATGCGGATCGGAAAGCCTGCGATGGCGACACAAAAGCCCAAG
TACCCTTTGGGCAAGATTGAGCCCAACTCGGCCAAGTATTTTGCGAGTTG
CACCCTTGGAGGAATAATTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023395 |
| DBxref | InterPro:IPR018108 |
| DBxref | PFAM:PF00153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5206503..5207690 - |
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