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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5219191..5222481+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006277-T1 ID=KJC3_006277-T1|Name=KJC3_006277-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3291bp|location=Sequence derived from alignment at ch4:5219191..5222481+ (Aspergillus niger KJC3)
CTATTTCTTGACGGTGACAACTGCGGAGGACTCCTACCGGCACTAAACCG
GAAACGGTTATAGCTAGCTTGCTCCGCGCAACGCGAGATTCGAAAGAGCA
ACACGCGCCATCTTCCAGGCAATCAATTAAAGGTCTTGCGCTCTCTCACT
CAGCCATCCCTAACCCAAGTCTCCGCTCTAGTAGCTGGCTCATCATCCGG
CAAGTGGCACAATGAATGAAGGCGACTGTAATCCACCCCCTTTCTCACTC
CATTGTCCTTGTGTTCTATGTTGCAAGTCGGCTGACTGAAATGGCCTCAA
TTAGGGACTTGCGACGCCAACGACGCCGTCCATCTGACGATCGTTCAACC
CGGCGAGACGAAAGCCAAGACGATTTCCAGTTTCCACCCTCAGTTCACAT
ATCCCATTTTCGGCGACGAGGAGCAAATATTCGGCTATAAGGGGTTGATC
ATCCGCTTGCGGTTTGCAGCCCATGACCTCCGCCCGAATATCAATATCTC
TTACGATGAGAAGTTCAAGCCCGTCGGCGATATTGCCGCCGTCGACCTGC
TGAAAACACTGAAGCCATGGGTTCCTGAAGGTTAGCCGCTATTATTTCCA
GTTGAGAGTAATCTGGGTTCCATCATGGCTAACCCAGGCGCATAATTGCA
GAGGCCTTCGGCTTACTTCCCGACTATGAAAAAGCCGTCCAGGAGGACGA
AGATGCAAAGGACTTTGTACCACCTGGCAAGCTTGTTCATAGCTATGTCA
CTCGAGACAGAAATTACGAAATCTGGGCCGGCTCCCTTGCTGATCCTCAA
GTCCGACGACTACTGGACCGCGCGCAAATTTTTGTATCGCTGTTCATCGA
AGCCGGTACACCCTTGGTCACGGATGATCCTGAATGGACACTTGAGAGAT
GGACAGTCTACTTTGTGTATGTTATGGCCTTGTCTTATGTTTCACTGTGG
CTAACGAAGTTGAAGCTATGAGAAAGTGAAACCGCCCACGCCAACGGCCT
CACAATATTCCATCGTCGGGTATGCGACCACTTATCGCTGGTGGTTCTAC
CAGAGAGACACTACACAGAGTCGCTCCGTCGTAAACGACCCATTCCCGGC
ACCCGAAATCAGACCTGCTCAGCTGCCGGCTCGGCTACGAATCGCTCAAT
TTTTGATTCTCCCTCCTCATCAAGGCTCGGGACATGGGACTCATCTCTAC
ACCACCATTCACGCCGCATGCTTCAAGGACCCGACAATTACCGAACTGAC
TGTCGAAGATCCGAATGAGGCTTTCGATGCCCTCCGCGACACAGCCGACT
ACCATATCTTGTTGCCGGAGTTCCTCAAGCACAAGGTAGACATCAACCCC
AACCCTTATGGAGAGCTCCCCAAGAAGCAGCGCCCTCGGCGTGTCCCTAC
GTCGGCACTGATCCCTACGAAGCTGTTGCACGACATCCGCTCGTCATTCA
AGATTGCCTCCACTCAGTTCGCTCACATCATGGAGATGTATCTTCTGGGT
CAAATACCTGCCAAGAATCGCCTAGCTGGTGGAACGAATATGTCCCGACT
ACTGATCAAGAAGCATAATGCCGAAGATCCTAACGACCGCCGATACTACT
GGTGGCGTATGCTCACCAAGCAGCGTCTTTACAAGCGCCACCGGGATCTA
CTCATTCAACTTGACTCGAGCGAACGCATCGAGAAGCTGGAGGAGACCGT
GACGAACGTCGAGGAGGGCTACGATGCTCTTCTCAAGGCCTTCAACGCCC
GCGAGGCAGCGCTGAAGGCCAAGGAAGAGGAGGCCGGTGTGCTTGCAACC
CCAGAATCGACCGCTGTTCTGGGTGAGGCAAGCAGCAGAGATCAGCGGGT
AAAGCGGAAGCTCACAGTCGAGGATGAGGAAGATGAAGAAGAGAACGAAG
AGGCAGCTAAGCGGACAAAGGTGTGAGCGACGGCGTTTTAACGTTTCTTT
ATGCTTGCCGTTCACCCACCATTTCATTGTAATATTAAACATTATGAAAT
ACCAAAACCATCCTTTTGCCATGAGCCATAATTATATCCTGAACTCCCAT
ACATACCTCCACAAATAGTATTACACTTGAAGCCATTGTCCCTCACGAAT
GATAGCTGGGCGGCGGCGACCCCATACTATCCAGGGTATCTATTGTCCCC
GACAGGGACTTACAATCCACACTCTTCAAGCTACTCGTCTCCGTCGACAA
GGTAACCGTCGCCAACCCGACCGTCGACGACGCCTCCGTATCCGATCCCT
CCCCACTTCCACCCTTTACATCCACATCCACATTATAACCACCTACTTCC
TGATCCACTACCACCTTAGCCCGCGACGGGGCACTCTCCCTCACCAACTC
CCCCACATACTCCAACGCCTGTCTGAAGCCCTGAATCTCTGCATGCATAG
TAGCAGAAGCAGTAGCATTCGCAATCCCACCCGATCCACCAAACACCCTC
AACTCTGCACCACCCTCCTCCTCATCATCAGACAGCCTCCCCATCTCCAC
ATCCCTCTCTGGCACACCAATAGACGCCATTACAACCGCCCCATCATCAA
CACCAACAACCTCCTGATCCTGACAATAGTAAGCAGAATACGAAGTCTTC
CCCTCCCACCACTGCCTCCATCGGTGTCTCCTCGCAGCGGCCTTATACGC
CCGCCGAGCTTTCCTCTCCTCGCGCTGAGCGGCCCGGTCTACTCGGCATC
GCTGGCAGCGCATCGTGTTGCTGCCGATTCGGTATGCCAGGGCGAAGAGG
CCAATAATGCAGATGAGGACGCTTAGGTTGATAAAGTAGTCGCGGAGGGT
GAGGGTCGAGAGCTTTCTCAGGAGGGAGGCGAGCCACTGGAATTTGAGGA
GGGAGTGGATGTGGTCATTGTTATTGGGGTTGTCGTTGTTGGTGTTCTTC
ATGATGTGGGTGTCTATAAGGGTCGATTAGAATGTGGAAAATGTATATAG
TGCGTGGAGGACTGACTGGCTGCTGTTGCTGTTGAGATAGTAGTAGATGA
TGATGGTAGAGGAATGGGTGCTCCGGCTGCCAGACGGGTGAAGTTGGTGG
TGGTGGTGAGACATATTAGTGTTAACTTTGCTAGCCATTGCATGGTGGTG
GTTGTGTGGGAGGTACTACATGGACGTGGGTTGGAAGACATGAAATGGTG
GAGGGAGTAGTATATGAGTTGGTGTAGTTGGGGGTTAGTTGTGGATAGTT
AATGTAGTAATAGATTGGCAAGTAGGTATACACGGTGTTGTATTCATGAA
CAAACTACTTGGGACAGAGAGTGAGAGTCATACGGGCATTA back to topCoding sequence (CDS) from alignment at ch4:5219191..5222481+ >KJC3_006277-T1 ID=KJC3_006277-T1|Name=KJC3_006277-T1|organism=Aspergillus niger KJC3|type=CDS|length=6072bp|location=Sequence derived from alignment at ch4:5219191..5222481+ (Aspergillus niger KJC3)
ATGAATGAAGGCGACTGGACTTGCGACGCCAACGACGCCGTCCATCTGAC
GATCGTTCAACCCGGCGAGACGAAAGCCAAGACGATTTCCAGTTTCCACC
CTCAGTTCACATATCCCATTTTCGGCGACGAGGAGCAAATATTCGGCTAT
AAGGGGTTGATCATCCGCTTGCGGTTTGCAGCCCATGACCTCCGCCCGAA
TATCAATATCTCTTACGATGAGAAGTTCAAGCCCGTCGGCGATATTGCCG
CCGTCGACCTGCTGAAAACACTGAAGCCATGGGTTCCTGAAGAGGCCTTC
GGCTTACTTCCCGACTATGAAAAAGCCGTCCAGGAGGACGAAGATGCAAA
GGACTTTGTACCACCTGGCAAGCTTGTTCATAGCTATGTCACTCGAGACA
GAAATTACGAAATCTGGGCCGGCTCCCTTGCTGATCCTCAAGTCCGACGA
CTACTGGACCGCGCGCAAATTTTTGTATCGCTGTTCATCGAAGCCGGTAC
ACCCTTGGTCACGGATGATCCTGAATGGACACTTGAGAGATGGACAGTCT
ACTTTGTCTATGAGAAAGTGAAACCGCCCACGCCAACGGCCTCACAATAT
TCCATCGTCGGGTATGCGACCACTTATCGCTGGTGGTTCTACCAGAGAGA
CACTACACAGAGTCGCTCCGTCGTAAACGACCCATTCCCGGCACCCGAAA
TCAGACCTGCTCAGCTGCCGGCTCGGCTACGAATCGCTCAATTTTTGATT
CTCCCTCCTCATCAAGGCTCGGGACATGGGACTCATCTCTACACCACCAT
TCACGCCGCATGCTTCAAGGACCCGACAATTACCGAACTGACTGTCGAAG
ATCCGAATGAGGCTTTCGATGCCCTCCGCGACACAGCCGACTACCATATC
TTGTTGCCGGAGTTCCTCAAGCACAAGGTAGACATCAACCCCAACCCTTA
TGGAGAGCTCCCCAAGAAGCAGCGCCCTCGGCGTGTCCCTACGTCGGCAC
TGATCCCTACGAAGCTGTTGCACGACATCCGCTCGTCATTCAAGATTGCC
TCCACTCAGTTCGCTCACATCATGGAGATGTATCTTCTGGGTCAAATACC
TGCCAAGAATCGCCTAGCTGGTGGAACGAATATGTCCCGACTACTGATCA
AGAAGCATAATGCCGAAGATCCTAACGACCGCCGATACTACTGGTGGCGT
ATGCTCACCAAGCAGCGTCTTTACAAGCGCCACCGGGATCTACTCATTCA
ACTTGACTCGAGCGAACGCATCGAGAAGCTGGAGGAGACCGTGACGAACG
TCGAGGAGGGCTACGATGCTCTTCTCAAGGCCTTCAACGCCCGCGAGGCA
GCGCTGAAGGCCAAGGAAGAGGAGGCCGGTGTGCTTGCAACCCCAGAATC
GACCGCTGTTCTGGGTGAGGCAAGCAGCAGAGATCAGCGGGTAAAGCGGA
AGCTCACAGTCGAGGATGAGGAAGATGAAGAAGAGAACGAAGAGGCAGCT
AAGCGGACAAAGGTGTGAATGAATGAAGGCGACTGGACTTGCGACGCCAA
CGACGCCGTCCATCTGACGATCGTTCAACCCGGCGAGACGAAAGCCAAGA
CGATTTCCAGTTTCCACCCTCAGTTCACATATCCCATTTTCGGCGACGAG
GAGCAAATATTCGGCTATAAGGGGTTGATCATCCGCTTGCGGTTTGCAGC
CCATGACCTCCGCCCGAATATCAATATCTCTTACGATGAGAAGTTCAAGC
CCGTCGGCGATATTGCCGCCGTCGACCTGCTGAAAACACTGAAGCCATGG
GTTCCTGAAGAGGCCTTCGGCTTACTTCCCGACTATGAAAAAGCCGTCCA
GGAGGACGAAGATGCAAAGGACTTTGTACCACCTGGCAAGCTTGTTCATA
GCTATGTCACTCGAGACAGAAATTACGAAATCTGGGCCGGCTCCCTTGCT
GATCCTCAAGTCCGACGACTACTGGACCGCGCGCAAATTTTTGTATCGCT
GTTCATCGAAGCCGGTACACCCTTGGTCACGGATGATCCTGAATGGACAC
TTGAGAGATGGACAGTCTACTTTGTCTATGAGAAAGTGAAACCGCCCACG
CCAACGGCCTCACAATATTCCATCGTCGGGTATGCGACCACTTATCGCTG
GTGGTTCTACCAGAGAGACACTACACAGAGTCGCTCCGTCGTAAACGACC
CATTCCCGGCACCCGAAATCAGACCTGCTCAGCTGCCGGCTCGGCTACGA
ATCGCTCAATTTTTGATTCTCCCTCCTCATCAAGGCTCGGGACATGGGAC
TCATCTCTACACCACCATTCACGCCGCATGCTTCAAGGACCCGACAATTA
CCGAACTGACTGTCGAAGATCCGAATGAGGCTTTCGATGCCCTCCGCGAC
ACAGCCGACTACCATATCTTGTTGCCGGAGTTCCTCAAGCACAAGGTAGA
CATCAACCCCAACCCTTATGGAGAGCTCCCCAAGAAGCAGCGCCCTCGGC
GTGTCCCTACGTCGGCACTGATCCCTACGAAGCTGTTGCACGACATCCGC
TCGTCATTCAAGATTGCCTCCACTCAGTTCGCTCACATCATGGAGATGTA
TCTTCTGGGTCAAATACCTGCCAAGAATCGCCTAGCTGGTGGAACGAATA
TGTCCCGACTACTGATCAAGAAGCATAATGCCGAAGATCCTAACGACCGC
CGATACTACTGGTGGCGTATGCTCACCAAGCAGCGTCTTTACAAGCGCCA
CCGGGATCTACTCATTCAACTTGACTCGAGCGAACGCATCGAGAAGCTGG
AGGAGACCGTGACGAACGTCGAGGAGGGCTACGATGCTCTTCTCAAGGCC
TTCAACGCCCGCGAGGCAGCGCTGAAGGCCAAGGAAGAGGAGGCCGGTGT
GCTTGCAACCCCAGAATCGACCGCTGTTCTGGGTGAGGCAAGCAGCAGAG
ATCAGCGGGTAAAGCGGAAGCTCACAGTCGAGGATGAGGAAGATGAAGAA
GAGAACGAAGAGGCAGCTAAGCGGACAAAGGTGTGAATGAATGAAGGCGA
CTGGACTTGCGACGCCAACGACGCCGTCCATCTGACGATCGTTCAACCCG
GCGAGACGAAAGCCAAGACGATTTCCAGTTTCCACCCTCAGTTCACATAT
CCCATTTTCGGCGACGAGGAGCAAATATTCGGCTATAAGGGGTTGATCAT
CCGCTTGCGGTTTGCAGCCCATGACCTCCGCCCGAATATCAATATCTCTT
ACGATGAGAAGTTCAAGCCCGTCGGCGATATTGCCGCCGTCGACCTGCTG
AAAACACTGAAGCCATGGGTTCCTGAAGAGGCCTTCGGCTTACTTCCCGA
CTATGAAAAAGCCGTCCAGGAGGACGAAGATGCAAAGGACTTTGTACCAC
CTGGCAAGCTTGTTCATAGCTATGTCACTCGAGACAGAAATTACGAAATC
TGGGCCGGCTCCCTTGCTGATCCTCAAGTCCGACGACTACTGGACCGCGC
GCAAATTTTTGTATCGCTGTTCATCGAAGCCGGTACACCCTTGGTCACGG
ATGATCCTGAATGGACACTTGAGAGATGGACAGTCTACTTTGTCTATGAG
AAAGTGAAACCGCCCACGCCAACGGCCTCACAATATTCCATCGTCGGGTA
TGCGACCACTTATCGCTGGTGGTTCTACCAGAGAGACACTACACAGAGTC
GCTCCGTCGTAAACGACCCATTCCCGGCACCCGAAATCAGACCTGCTCAG
CTGCCGGCTCGGCTACGAATCGCTCAATTTTTGATTCTCCCTCCTCATCA
AGGCTCGGGACATGGGACTCATCTCTACACCACCATTCACGCCGCATGCT
TCAAGGACCCGACAATTACCGAACTGACTGTCGAAGATCCGAATGAGGCT
TTCGATGCCCTCCGCGACACAGCCGACTACCATATCTTGTTGCCGGAGTT
CCTCAAGCACAAGGTAGACATCAACCCCAACCCTTATGGAGAGCTCCCCA
AGAAGCAGCGCCCTCGGCGTGTCCCTACGTCGGCACTGATCCCTACGAAG
CTGTTGCACGACATCCGCTCGTCATTCAAGATTGCCTCCACTCAGTTCGC
TCACATCATGGAGATGTATCTTCTGGGTCAAATACCTGCCAAGAATCGCC
TAGCTGGTGGAACGAATATGTCCCGACTACTGATCAAGAAGCATAATGCC
GAAGATCCTAACGACCGCCGATACTACTGGTGGCGTATGCTCACCAAGCA
GCGTCTTTACAAGCGCCACCGGGATCTACTCATTCAACTTGACTCGAGCG
AACGCATCGAGAAGCTGGAGGAGACCGTGACGAACGTCGAGGAGGGCTAC
GATGCTCTTCTCAAGGCCTTCAACGCCCGCGAGGCAGCGCTGAAGGCCAA
GGAAGAGGAGGCCGGTGTGCTTGCAACCCCAGAATCGACCGCTGTTCTGG
GTGAGGCAAGCAGCAGAGATCAGCGGGTAAAGCGGAAGCTCACAGTCGAG
GATGAGGAAGATGAAGAAGAGAACGAAGAGGCAGCTAAGCGGACAAAGGT
GTGAATGAATGAAGGCGACTGGACTTGCGACGCCAACGACGCCGTCCATC
TGACGATCGTTCAACCCGGCGAGACGAAAGCCAAGACGATTTCCAGTTTC
CACCCTCAGTTCACATATCCCATTTTCGGCGACGAGGAGCAAATATTCGG
CTATAAGGGGTTGATCATCCGCTTGCGGTTTGCAGCCCATGACCTCCGCC
CGAATATCAATATCTCTTACGATGAGAAGTTCAAGCCCGTCGGCGATATT
GCCGCCGTCGACCTGCTGAAAACACTGAAGCCATGGGTTCCTGAAGAGGC
CTTCGGCTTACTTCCCGACTATGAAAAAGCCGTCCAGGAGGACGAAGATG
CAAAGGACTTTGTACCACCTGGCAAGCTTGTTCATAGCTATGTCACTCGA
GACAGAAATTACGAAATCTGGGCCGGCTCCCTTGCTGATCCTCAAGTCCG
ACGACTACTGGACCGCGCGCAAATTTTTGTATCGCTGTTCATCGAAGCCG
GTACACCCTTGGTCACGGATGATCCTGAATGGACACTTGAGAGATGGACA
GTCTACTTTGTCTATGAGAAAGTGAAACCGCCCACGCCAACGGCCTCACA
ATATTCCATCGTCGGGTATGCGACCACTTATCGCTGGTGGTTCTACCAGA
GAGACACTACACAGAGTCGCTCCGTCGTAAACGACCCATTCCCGGCACCC
GAAATCAGACCTGCTCAGCTGCCGGCTCGGCTACGAATCGCTCAATTTTT
GATTCTCCCTCCTCATCAAGGCTCGGGACATGGGACTCATCTCTACACCA
CCATTCACGCCGCATGCTTCAAGGACCCGACAATTACCGAACTGACTGTC
GAAGATCCGAATGAGGCTTTCGATGCCCTCCGCGACACAGCCGACTACCA
TATCTTGTTGCCGGAGTTCCTCAAGCACAAGGTAGACATCAACCCCAACC
CTTATGGAGAGCTCCCCAAGAAGCAGCGCCCTCGGCGTGTCCCTACGTCG
GCACTGATCCCTACGAAGCTGTTGCACGACATCCGCTCGTCATTCAAGAT
TGCCTCCACTCAGTTCGCTCACATCATGGAGATGTATCTTCTGGGTCAAA
TACCTGCCAAGAATCGCCTAGCTGGTGGAACGAATATGTCCCGACTACTG
ATCAAGAAGCATAATGCCGAAGATCCTAACGACCGCCGATACTACTGGTG
GCGTATGCTCACCAAGCAGCGTCTTTACAAGCGCCACCGGGATCTACTCA
TTCAACTTGACTCGAGCGAACGCATCGAGAAGCTGGAGGAGACCGTGACG
AACGTCGAGGAGGGCTACGATGCTCTTCTCAAGGCCTTCAACGCCCGCGA
GGCAGCGCTGAAGGCCAAGGAAGAGGAGGCCGGTGTGCTTGCAACCCCAG
AATCGACCGCTGTTCTGGGTGAGGCAAGCAGCAGAGATCAGCGGGTAAAG
CGGAAGCTCACAGTCGAGGATGAGGAAGATGAAGAAGAGAACGAAGAGGC
AGCTAAGCGGACAAAGGTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004402 | histone acetyltransferase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006325 | chromatin organization |
| GO:0016573 | histone acetylation |
| GO:0006348 | chromatin silencing at telomere |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006277-T1.utr5p1 | KJC3_006277-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006277-T1.utr3p1 | KJC3_006277-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263EVJ |
| DBxref | InterPro:IPR016181 |
| DBxref | InterPro:IPR019467 |
| DBxref | InterPro:IPR037113 |
| DBxref | InterPro:IPR017380 |
| DBxref | PFAM:PF10394 |
| Product | histone acetyltransferase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5219191..5222481 + |
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