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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5228555..5230602+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006282-T1 ID=KJC3_006282-T1|Name=KJC3_006282-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2048bp|location=Sequence derived from alignment at ch4:5228555..5230602+ (Aspergillus niger KJC3)
AGAAGATCCACGTCGCTTGACCTTATGGTAAGCACTACTATTCTACAGCC
ACTCTTCATCTCGATTTGCTGACCATGACGTGACTGGAGCTACGTAGGCG
TCAATCCTCCGGCAGATTGTTGCCGGTCCCCGGTTACAACATCCTGAAGC
TGGTCTAGACTTGTGCTATGTGACCGATAACAGTAAGCCACCCAATCCTA
TTATAATGCTTTCCCTTTCGCAATACTTCCTCATATTAACTCATTCCCTG
CTCCTGCGCACCTACAGTTATCGCAACCTCCGGTCCCTCCTCCAACTACC
CGCAACGCGCCTACAGAAACCCCCTGGACGAGCTCGTCAAATTCCTCGAC
TCCAAACATGATTCGGACTGGTGCATCTGGGAGTTCCGCGCCGAAGGCAC
CGGTTATCCCGACTCAGAGGTCTACAATCGCATTCATCACTACCCATGGC
CCGATCACCATCCGCCCCCGTTTGCGCTCATCCCCGCCATGACGGGCAGT
ATGCGCAATTGGATTCATCGACTCGATGAGCCTGACAGCAAAGATGAGAA
GGATAGGAAGAAAGATAGGGTTGCGGTCGTTCATTGCAAGGCCGGAAAAG
GCCGTAGTGGCACCGTGGCCTGCAGCTACCTGATCAGCCAGGAAGGGTGG
AAGGCGGACGACGCGCTGCAGCGATTCACCGAGCGGCGAATGAGAGTCGG
GTTCGGTGCTGGGGTGAGCATCCCCAGTCAGCTGCGGTGGGTGGGATACG
TGGATCAATGGACCAACCAGATGGGGAAGAACTATATCGAGCGGCCGGTG
GAGATCCTCGAGGTGCATGTATGGGGACTGAGAGACGGTGTCAAGGTCGC
GGTGGAGGGATTCGAGGACCACGGGAAGAAAATCAAGAAGTACCATCTCT
TCCACCGGAGTGAGCGTACGGTAGTCGACGATGGGAAGTCCAAGACGATG
CCCCCAGATACAGTCACGAACGGCCATACAAACGATAACGACATCAAGAA
TCAGCCCAAATCCGCTGTGACTTTTCCACCGAGAACAGAAGACAGTCCTC
ACTCATCCACTGACGCTCCCGCGAGAACCGACACTCCTCCGAAACACGTC
TCCGCCATAGTCTTCCGTCCCAAGTCCCCCATCACCATCCCCACGTCCGA
TGTAAACATTGACTTCGAACGACGCAGCAAGGCCGCTTACACAGGCTGGG
CCATGGTGACTTCCATCGCGCACGTCTGGTTCAACGCCTACTTCGAAGGC
GGCGACCAGCACGACTCCGGCGTCTTCGAAGCCGAATGGGACGCCCTCGA
CGGCATCAAAGGCACAACACGCAAGGGCGTGAAAGCCTTGGACCGTGTGA
AAGTCGTCTGGCGATACGCCAACCAACCAGGCACTTCCCACCCCGACACA
GGGCGACCCATTTCCGAGCCGAAGCCCGGCGAACCGATTCCAGAAACTCA
GCCACCAGATTGGCACATTCATGGCACTGGCACTGGCACTGGCTCCAACT
CTGGTACTGATAGCCCACGAGACCAAGAAGACGAGAACACACCTCCTCTA
CCACCATCTAAAGAACTAGAAGCCGACAAGATTTCCGACTCTGAACCAGA
CAGCAGCTCAACCAAACATAAACATAAAGCCAAACATACTACTCATGACC
ACGAACACGATCATCCCCTCCTCTCAGACCTCAGCACCGCAGCCGCAACC
GCCGTGTCTTCAATACCGGGACTAGGCAAGCAGCTCGGACTCCGCAAACA
AACCGACGAAAGCAAAGACGTGAGTCTTGCGGGAAGTAGCGAAGATGAGT
CAGGGAGAAGTTCTGCTGCTCCTTCGCAGGCGAAGAAAAATACGAAGAAG
GAGTGGTCGTCTGTTGATGAGGGTAAATAATACAGTTGATCTTCTTTCTC
GGAGGACTGTTACATACATAGCAGTGCTCTGGTCTGTCTATATTCTCATA
TGTATATGAAGGAATTGCCATTGGATTGAGGCTGGACAAGGGAGTTATTT
GTACATAATACACGATACAGATACACGAATACGAATGTATTGACAGCG back to topCoding sequence (CDS) from alignment at ch4:5228555..5230602+ >KJC3_006282-T1 ID=KJC3_006282-T1|Name=KJC3_006282-T1|organism=Aspergillus niger KJC3|type=CDS|length=1392bp|location=Sequence derived from alignment at ch4:5228555..5230602+ (Aspergillus niger KJC3)
ATGACGGGCAGTATGCGCAATTGGATTCATCGACTCGATGAGCCTGACAG
CAAAGATGAGAAGGATAGGAAGAAAGATAGGGTTGCGGTCGTTCATTGCA
AGGCCGGAAAAGGCCGTAGTGGCACCGTGGCCTGCAGCTACCTGATCAGC
CAGGAAGGGTGGAAGGCGGACGACGCGCTGCAGCGATTCACCGAGCGGCG
AATGAGAGTCGGGTTCGGTGCTGGGGTGAGCATCCCCAGTCAGCTGCGGT
GGGTGGGATACGTGGATCAATGGACCAACCAGATGGGGAAGAACTATATC
GAGCGGCCGGTGGAGATCCTCGAGGTGCATGTATGGGGACTGAGAGACGG
TGTCAAGGTCGCGGTGGAGGGATTCGAGGACCACGGGAAGAAAATCAAGA
AGTACCATCTCTTCCACCGGAGTGAGCGTACGGTAGTCGACGATGGGAAG
TCCAAGACGATGCCCCCAGATACAGTCACGAACGGCCATACAAACGATAA
CGACATCAAGAATCAGCCCAAATCCGCTGTGACTTTTCCACCGAGAACAG
AAGACAGTCCTCACTCATCCACTGACGCTCCCGCGAGAACCGACACTCCT
CCGAAACACGTCTCCGCCATAGTCTTCCGTCCCAAGTCCCCCATCACCAT
CCCCACGTCCGATGTAAACATTGACTTCGAACGACGCAGCAAGGCCGCTT
ACACAGGCTGGGCCATGGTGACTTCCATCGCGCACGTCTGGTTCAACGCC
TACTTCGAAGGCGGCGACCAGCACGACTCCGGCGTCTTCGAAGCCGAATG
GGACGCCCTCGACGGCATCAAAGGCACAACACGCAAGGGCGTGAAAGCCT
TGGACCGTGTGAAAGTCGTCTGGCGATACGCCAACCAACCAGGCACTTCC
CACCCCGACACAGGGCGACCCATTTCCGAGCCGAAGCCCGGCGAACCGAT
TCCAGAAACTCAGCCACCAGATTGGCACATTCATGGCACTGGCACTGGCA
CTGGCTCCAACTCTGGTACTGATAGCCCACGAGACCAAGAAGACGAGAAC
ACACCTCCTCTACCACCATCTAAAGAACTAGAAGCCGACAAGATTTCCGA
CTCTGAACCAGACAGCAGCTCAACCAAACATAAACATAAAGCCAAACATA
CTACTCATGACCACGAACACGATCATCCCCTCCTCTCAGACCTCAGCACC
GCAGCCGCAACCGCCGTGTCTTCAATACCGGGACTAGGCAAGCAGCTCGG
ACTCCGCAAACAAACCGACGAAAGCAAAGACGTGAGTCTTGCGGGAAGTA
GCGAAGATGAGTCAGGGAGAAGTTCTGCTGCTCCTTCGCAGGCGAAGAAA
AATACGAAGAAGGAGTGGTCGTCTGTTGATGAGGGTAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016311 | dephosphorylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004725 | protein tyrosine phosphatase activity |
| GO:0008138 | protein tyrosine/serine/threonine phosphatase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006282-T1.utr3p1 | KJC3_006282-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029023 |
| DBxref | InterPro:IPR016130 |
| DBxref | InterPro:IPR000340 |
| DBxref | InterPro:IPR029021 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5228555..5230602 + |
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