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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5248342..5249893- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006288-T1 ID=KJC3_006288-T1|Name=KJC3_006288-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1552bp|location=Sequence derived from alignment at ch4:5248342..5249893- (Aspergillus niger KJC3)
AACAGCTTCGCGCCAGTTCTTTTTGCAACCCCAGCGTGACGGGAGTTCTG
ACTTGTCTGATCCTGCCGGACGGGGTTGAACACTACTTCTACTACAAATT
GCCATTTATGCAGCTTCTGTCACCTTCGGTTCGCTCATATCGTCTGATCT
GCTCGGAAGCTCGACCTGTACAGTGTATGCACGCTGCGGAGCTCGTGTCG
CTCTACCGAATACTTTGAGCACGAATCACACACAGCACACAGCACAATCC
ATTCTGTCTATCAGCATACCAGCATACTTTCTGCACTTTCTACATCTATG
CGACTTTGCTTACATGTTCAACCGAAATCAATCATCCCCCCGTGATTCCT
ATCAGCACGCATCAAAGCATAATCACATGCTAAAGAAAGCGACTTGAACA
ATACCCACTCTGCGCATATACCACACACATACATACTCCGCACACCTCAA
TTACCACCACCAGTCCCTCAACTCACCAAAGAAGAGAAAAAGAAATAAAA
AACAATGTTCAATCCCAACATCCCCCCTCCCAACCGCGGCCGTCGCCAAC
AAGATCCCATCGTGATTGCCGACGACGAGGAGGACGAAGAAGTCGAAAGC
GACTACCCGGAACAGATCTACATCGAAGGAGTCGAAGACGACCAAGACTC
ATTAGATCGCGATCTCGACGATGACGATGACGACGACGACGACATGCAAG
TAGAGTACTCATTACAATCATCACGGCCTCACTCGGGTATAATGGGGTAT
AGTAAGTTCCCCCCCTCCCCCTAATATGCAGCACAGCACCCCGCAATCAC
CTTAATCCTACCACCATCCAAACCACGCAATGAAAAACAAGGAAAAAACG
ACAACCACTAACAACTCAACCCTGGGAACAGCATACCCAACAACCCCCAC
CCCCCACCTCGGCCCAACTCTCTACCAAACAACCCTAGACCAAGAACGCC
AAATACGCACTCGACTGCGCGAAGACCGACACGCCGCGTTATGCGTCCTC
TTAGATAGGGAATTACTGACTATTCAGGCGTTGGCGCATCAGGAGGTGAG
ACTATCCCACCCTCCGCCGTACCTCCCTCCAACACCAAGACTACTAACAT
GGACAATGTCTAATGTACAGACCCTCCCGCAAACCCGCCGCCGATTCCTA
TCCCGTCTTCTTGCCCCGGAGGACCCCGAATCCGCGGCCTCGATCCGCGC
AGACCGGTTCACGGTGCAGCATCCCAGTACGAGCAGTATTGCTTCTTCGT
CGACGGTTGCGATGATTGTGCCGCGTCAGGTGGTAGACGTGCATGAGACG
GACGATGCGGGGTGGAGGAGGCCGATGGAGCGGGCGGGACGAGGGGGATC
GGTAAGTGCTGGTGCTGGTGGGATGCAGTCGTCGCCGGCGTCGGTGGGGT
CGGGGTCTATTTCTGGGTCTGGGTCTGCGTCGGCGTCGAAGATGAAGGGG
AGGATGGGGACGCCGGACCGGGTGGGGAGGGGGGGTAGAGGGGGCAGGGG
TTTGCAGCAGTCGGCGTCATATTGGGAGAGGGAGAGAAGGAGGGGGTTTT
GA back to topCoding sequence (CDS) from alignment at ch4:5248342..5249893- >KJC3_006288-T1 ID=KJC3_006288-T1|Name=KJC3_006288-T1|organism=Aspergillus niger KJC3|type=CDS|length=2529bp|location=Sequence derived from alignment at ch4:5248342..5249893- (Aspergillus niger KJC3)
ACCCTCCCGCAAACCCGCCGCCGATTCCTATCCCGTCTTCTTGCCCCGGA
GGACCCCGAATCCGCGGCCTCGATCCGCGCAGACCGGTTCACGGTGCAGC
ATCCCAGTACGAGCAGTATTGCTTCTTCGTCGACGGTTGCGATGATTGTG
CCGCGTCAGGTGGTAGACGTGCATGAGACGGACGATGCGGGGTGGAGGAG
GCCGATGGAGCGGGCGGGACGAGGGGGATCGGTAAGTGCTGGTGCTGGTG
GGATGCAGTCGTCGCCGGCGTCGGTGGGGTCGGGGTCTATTTCTGGGTCT
GGGTCTGCGTCGGCGTCGAAGATGAAGGGGAGGATGGGGACGCCGGACCG
GGTGGGGAGGGGGGGTAGAGGGGGCAGGGGTTTGCAGCAGTCGGCGTCAT
ATTGGGAGAGGGAGAGAAGGAGGGGGTTTTGACATACCCAACAACCCCCA
CCCCCCACCTCGGCCCAACTCTCTACCAAACAACCCTAGACCAAGAACGC
CAAATACGCACTCGACTGCGCGAAGACCGACACGCCGCGTTATGCGTCCT
CTTAGATAGGGAATTACTGACTATTCAGGCGTTGGCGCATCAGGAGATGT
TCAATCCCAACATCCCCCCTCCCAACCGCGGCCGTCGCCAACAAGATCCC
ATCGTGATTGCCGACGACGAGGAGGACGAAGAAGTCGAAAGCGACTACCC
GGAACAGATCTACATCGAAGGAGTCGAAGACGACCAAGACTCATTAGATC
GCGATCTCGACGATGACGATGACGACGACGACGACATGCAAGTAGAGTAC
TCATTACAATCATCACGGCCTCACTCGGGTATAATGGGGTATAACCCTCC
CGCAAACCCGCCGCCGATTCCTATCCCGTCTTCTTGCCCCGGAGGACCCC
GAATCCGCGGCCTCGATCCGCGCAGACCGGTTCACGGTGCAGCATCCCAG
TACGAGCAGTATTGCTTCTTCGTCGACGGTTGCGATGATTGTGCCGCGTC
AGGTGGTAGACGTGCATGAGACGGACGATGCGGGGTGGAGGAGGCCGATG
GAGCGGGCGGGACGAGGGGGATCGGTAAGTGCTGGTGCTGGTGGGATGCA
GTCGTCGCCGGCGTCGGTGGGGTCGGGGTCTATTTCTGGGTCTGGGTCTG
CGTCGGCGTCGAAGATGAAGGGGAGGATGGGGACGCCGGACCGGGTGGGG
AGGGGGGGTAGAGGGGGCAGGGGTTTGCAGCAGTCGGCGTCATATTGGGA
GAGGGAGAGAAGGAGGGGGTTTTGACATACCCAACAACCCCCACCCCCCA
CCTCGGCCCAACTCTCTACCAAACAACCCTAGACCAAGAACGCCAAATAC
GCACTCGACTGCGCGAAGACCGACACGCCGCGTTATGCGTCCTCTTAGAT
AGGGAATTACTGACTATTCAGGCGTTGGCGCATCAGGAGATGTTCAATCC
CAACATCCCCCCTCCCAACCGCGGCCGTCGCCAACAAGATCCCATCGTGA
TTGCCGACGACGAGGAGGACGAAGAAGTCGAAAGCGACTACCCGGAACAG
ATCTACATCGAAGGAGTCGAAGACGACCAAGACTCATTAGATCGCGATCT
CGACGATGACGATGACGACGACGACGACATGCAAGTAGAGTACTCATTAC
AATCATCACGGCCTCACTCGGGTATAATGGGGTATAACCCTCCCGCAAAC
CCGCCGCCGATTCCTATCCCGTCTTCTTGCCCCGGAGGACCCCGAATCCG
CGGCCTCGATCCGCGCAGACCGGTTCACGGTGCAGCATCCCAGTACGAGC
AGTATTGCTTCTTCGTCGACGGTTGCGATGATTGTGCCGCGTCAGGTGGT
AGACGTGCATGAGACGGACGATGCGGGGTGGAGGAGGCCGATGGAGCGGG
CGGGACGAGGGGGATCGGTAAGTGCTGGTGCTGGTGGGATGCAGTCGTCG
CCGGCGTCGGTGGGGTCGGGGTCTATTTCTGGGTCTGGGTCTGCGTCGGC
GTCGAAGATGAAGGGGAGGATGGGGACGCCGGACCGGGTGGGGAGGGGGG
GTAGAGGGGGCAGGGGTTTGCAGCAGTCGGCGTCATATTGGGAGAGGGAG
AGAAGGAGGGGGTTTTGACATACCCAACAACCCCCACCCCCCACCTCGGC
CCAACTCTCTACCAAACAACCCTAGACCAAGAACGCCAAATACGCACTCG
ACTGCGCGAAGACCGACACGCCGCGTTATGCGTCCTCTTAGATAGGGAAT
TACTGACTATTCAGGCGTTGGCGCATCAGGAGATGTTCAATCCCAACATC
CCCCCTCCCAACCGCGGCCGTCGCCAACAAGATCCCATCGTGATTGCCGA
CGACGAGGAGGACGAAGAAGTCGAAAGCGACTACCCGGAACAGATCTACA
TCGAAGGAGTCGAAGACGACCAAGACTCATTAGATCGCGATCTCGACGAT
GACGATGACGACGACGACGACATGCAAGTAGAGTACTCATTACAATCATC
ACGGCCTCACTCGGGTATAATGGGGTATA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006288-T1.utr5p1 | KJC3_006288-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5248342..5249893 - |
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