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KJC3_006305-T1, KJC3_006305-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006305-T1
Unique NameKJC3_006305-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5324163..5325757-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006305-T1 ID=KJC3_006305-T1|Name=KJC3_006305-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1595bp|location=Sequence derived from alignment at ch4:5324163..5325757- (Aspergillus niger KJC3)
AACTATTCTAGTTTATACTCCGGTCAACTTTCTCCCCAGCCTGAAAAACA
CAGCGTTCAGTATGGACGACGATGATGCCCCACCCCAGCTGGTTGACATC
TCGACCGCCTCCGATGTGGCCCCGCCATCGACGTCACTAGACACGCCGCC
TCAGAACCGCGTGCCCATCACGCTTGTGACTGGTATGATGTGATGCCACA
CATGCAGATCGATCTCATTGTAGACCAGCAGCAAAAAAGAAAATCTCCCG
TAGATCCACACTAACTAACATTTCCTCGTGTCAGGCTATCTGGGAGCCGG
CAAGACCACTCTCCTCAACTATATCCTCACCGAGAAGCATGGCAAGAAGA
TTGCCGTGATCATGAACGGTGAGTGACCACCACTCCATAGAACAAGACTA
TTTAGATTGCTAAAATAATGTAGAATTCGGGGACTGTAAGAGAAAACAAC
CCATACATTCTCGCCCTTTCCACTATATAAACAAACCCAAATTAACACCC
ACCCAGCAACCGACATCGAGAAACCCCTAACCGTCAACCAAGACGGTCAA
GAAGTGACCGAATGGATGGAAGTTGGCAATGGCTGCATCTGCTGCTCTGT
CAAGTACATCCCCATCACCCACCCTTATCTAGCACACACACAACTAATAC
AAGAGCAGAGACAACGGCGTCATGGCCATCGAGTCCCTAATGGAACGCCG
CGGCGCCTTCGACTACATCCTGCTTGAAACGACCGGGCTTGCCGACCCAG
GAAACATTGCCCCAATCTTCTGGGTGGACGACAACCTAGGAAGCAGCATC
TACCTGGACGGAATCGTCACTCTCGTCGACGCCAAAAACATCCTGCATCT
ACTAGACGAGCCCACTCCCGAAGAAACCGTCTCCAGCCACGGAGCAGAAG
CTGAATCCGAGAACTCCCACACGCACACCCACACCGGCCCCGTCCTCTCC
ATGGCACACATGCAAATCTCGCACGCGGACGTAATCATCATCAACAAAGC
AGACCTAGTAACATCCGACGAACTAGCAATAGTCCAAGACCGCGTGACGG
CCATCAACAGCGCAGCTAAAATCCACATCACGGATCATAGCAAGACGCCG
AAGATAGAGGGCGTGGTGCTTGATCTGCATGCGTATGATCATTTGGATAG
CTTGGATTTCGCCCAGAAGGGACATAGTCATATGGATCCGGTATTACCCC
TCCAGTTTCAGAGACGTATGGTGAAGGGATTTATTTAACACAACTCACAG
TCCATCTCAACCATCGCTCTCACCACACCCCCCATCACCCCAGCCCAAGT
AGCCCGTGTCGACACCTGGCTTCAATCCGTCCTGTGGGACTCCACGATGC
CGCTCGCAGCGGAGGTATCCGGGCCTACGGGATTCGATATCCACCGGTTA
AAGGGCATCCTTGTGCTGAGTGATGGGTCGACGAAGATTATTCAGGCGGT
GCGGGATGTTTTTGAGATTAGGGACTCGGAGCCCGCAGATGGGAAGACGC
AATGTAAGATCGTTTTGATTGGTCGGGGGTTGGGTGGTGATGGGGGGCGG
GCGTGGCAGAGGAGTTTGGAGGAGTGGTTGGGGCGGGTGGATTAG
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Coding sequence (CDS) from alignment at ch4:5324163..5325757-

>KJC3_006305-T1 ID=KJC3_006305-T1|Name=KJC3_006305-T1|organism=Aspergillus niger KJC3|type=CDS|length=2745bp|location=Sequence derived from alignment at ch4:5324163..5325757- (Aspergillus niger KJC3)
TCCATCTCAACCATCGCTCTCACCACACCCCCCATCACCCCAGCCCAAGT
AGCCCGTGTCGACACCTGGCTTCAATCCGTCCTGTGGGACTCCACGATGC
CGCTCGCAGCGGAGGTATCCGGGCCTACGGGATTCGATATCCACCGGTTA
AAGGGCATCCTTGTGCTGAGTGATGGGTCGACGAAGATTATTCAGGCGGT
GCGGGATGTTTTTGAGATTAGGGACTCGGAGCCCGCAGATGGGAAGACGC
AATGTAAGATCGTTTTGATTGGTCGGGGGTTGGGTGGTGATGGGGGGCGG
GCGTGGCAGAGGAGTTTGGAGGAGTGGTTGGGGCGGGTGGATTAGAGACA
ACGGCGTCATGGCCATCGAGTCCCTAATGGAACGCCGCGGCGCCTTCGAC
TACATCCTGCTTGAAACGACCGGGCTTGCCGACCCAGGAAACATTGCCCC
AATCTTCTGGGTGGACGACAACCTAGGAAGCAGCATCTACCTGGACGGAA
TCGTCACTCTCGTCGACGCCAAAAACATCCTGCATCTACTAGACGAGCCC
ACTCCCGAAGAAACCGTCTCCAGCCACGGAGCAGAAGCTGAATCCGAGAA
CTCCCACACGCACACCCACACCGGCCCCGTCCTCTCCATGGCACACATGC
AAATCTCGCACGCGGACGTAATCATCATCAACAAAGCAGACCTAGTAACA
TCCGACGAACTAGCAATAGTCCAAGACCGCGTGACGGCCATCAACAGCGC
AGCTAAAATCCACATCACGGATCATAGCAAGACGCCGAAGATAGAGGGCG
TGGTGCTTGATCTGCATGCGTATGATCATTTGGATAGCTTGGATTTCGCC
CAGAAGGGACATAGTCATATGGATCCGATGGAAGTTGGCAATGGCTGCAT
CTGCTGCTCTGTCAATCCATCTCAACCATCGCTCTCACCACACCCCCCAT
CACCCCAGCCCAAGTAGCCCGTGTCGACACCTGGCTTCAATCCGTCCTGT
GGGACTCCACGATGCCGCTCGCAGCGGAGGTATCCGGGCCTACGGGATTC
GATATCCACCGGTTAAAGGGCATCCTTGTGCTGAGTGATGGGTCGACGAA
GATTATTCAGGCGGTGCGGGATGTTTTTGAGATTAGGGACTCGGAGCCCG
CAGATGGGAAGACGCAATGTAAGATCGTTTTGATTGGTCGGGGGTTGGGT
GGTGATGGGGGGCGGGCGTGGCAGAGGAGTTTGGAGGAGTGGTTGGGGCG
GGTGGATTAGAGACAACGGCGTCATGGCCATCGAGTCCCTAATGGAACGC
CGCGGCGCCTTCGACTACATCCTGCTTGAAACGACCGGGCTTGCCGACCC
AGGAAACATTGCCCCAATCTTCTGGGTGGACGACAACCTAGGAAGCAGCA
TCTACCTGGACGGAATCGTCACTCTCGTCGACGCCAAAAACATCCTGCAT
CTACTAGACGAGCCCACTCCCGAAGAAACCGTCTCCAGCCACGGAGCAGA
AGCTGAATCCGAGAACTCCCACACGCACACCCACACCGGCCCCGTCCTCT
CCATGGCACACATGCAAATCTCGCACGCGGACGTAATCATCATCAACAAA
GCAGACCTAGTAACATCCGACGAACTAGCAATAGTCCAAGACCGCGTGAC
GGCCATCAACAGCGCAGCTAAAATCCACATCACGGATCATAGCAAGACGC
CGAAGATAGAGGGCGTGGTGCTTGATCTGCATGCGTATGATCATTTGGAT
AGCTTGGATTTCGCCCAGAAGGGACATAGTCATATGGATCCGATGGAAGT
TGGCAATGGCTGCATCTGCTGCTCTGTCAATCCATCTCAACCATCGCTCT
CACCACACCCCCCATCACCCCAGCCCAAGTAGCCCGTGTCGACACCTGGC
TTCAATCCGTCCTGTGGGACTCCACGATGCCGCTCGCAGCGGAGGTATCC
GGGCCTACGGGATTCGATATCCACCGGTTAAAGGGCATCCTTGTGCTGAG
TGATGGGTCGACGAAGATTATTCAGGCGGTGCGGGATGTTTTTGAGATTA
GGGACTCGGAGCCCGCAGATGGGAAGACGCAATGTAAGATCGTTTTGATT
GGTCGGGGGTTGGGTGGTGATGGGGGGCGGGCGTGGCAGAGGAGTTTGGA
GGAGTGGTTGGGGCGGGTGGATTAGAGACAACGGCGTCATGGCCATCGAG
TCCCTAATGGAACGCCGCGGCGCCTTCGACTACATCCTGCTTGAAACGAC
CGGGCTTGCCGACCCAGGAAACATTGCCCCAATCTTCTGGGTGGACGACA
ACCTAGGAAGCAGCATCTACCTGGACGGAATCGTCACTCTCGTCGACGCC
AAAAACATCCTGCATCTACTAGACGAGCCCACTCCCGAAGAAACCGTCTC
CAGCCACGGAGCAGAAGCTGAATCCGAGAACTCCCACACGCACACCCACA
CCGGCCCCGTCCTCTCCATGGCACACATGCAAATCTCGCACGCGGACGTA
ATCATCATCAACAAAGCAGACCTAGTAACATCCGACGAACTAGCAATAGT
CCAAGACCGCGTGACGGCCATCAACAGCGCAGCTAAAATCCACATCACGG
ATCATAGCAAGACGCCGAAGATAGAGGGCGTGGTGCTTGATCTGCATGCG
TATGATCATTTGGATAGCTTGGATTTCGCCCAGAAGGGACATAGTCATAT
GGATCCGATGGAAGTTGGCAATGGCTGCATCTGCTGCTCTGTCAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006305KJC3_006305Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006305-T1KJC3_006305-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006305-T1.cdsKJC3_006305-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006305-T1.exon4KJC3_006305-T1.exon4Aspergillus niger KJC3exon
KJC3_006305-T1.exon3KJC3_006305-T1.exon3Aspergillus niger KJC3exon
KJC3_006305-T1.exon2KJC3_006305-T1.exon2Aspergillus niger KJC3exon
KJC3_006305-T1.exon1KJC3_006305-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006305-T1.utr5p2KJC3_006305-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006305-T1.utr5p1KJC3_006305-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR011629
DBxrefInterPro:IPR003495
DBxrefInterPro:IPR036627
DBxrefPFAM:PF07683
DBxrefPFAM:PF02492
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5324163..5325757 -
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