|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5338967..5341832- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006315-T1 ID=KJC3_006315-T1|Name=KJC3_006315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2866bp|location=Sequence derived from alignment at ch4:5338967..5341832- (Aspergillus niger KJC3)
GTTGCAGGCTCAACATCGTCACTGATATCAGCACGCCCATGGAGCAGCAG
AAGAGTAGCTACTTGGTCTCTTCGATATTACCCCTCCAAATGTGTAGACC
CAACGTTTGAGACCATTTTGGCCAAATTCTAGGTGATCACCTAATTAACG
ACCAATGCTTGGAGGCATCCATCAGTGGGTACTGGATTTGGTCTCGACCT
GTGGCTGCATATATTCGACAATAGATGGAACTAATTCAGTTTGTTTTAGC
TATTTTGAGATCAAAGCCACGCGATCCTACGGTAATGGTTTCCCGGGGAG
CAGTTGCCATATGGGATTTTGATCACTGTCCCTGATTCCTGAAGTGATAT
GTCGATCTGCGAATGACAAAAGGAGAGCCGGGTCAGGGACCTCTGCGCCA
TGGTGGATCATGTGGGGAATATTGAACGGCTACCCAAAGAATAGTTCCTA
TGGGATAAGGCTTATTCTCCATCCTAATGGGGCAAACGTTGATAAGCAGC
AGAGGCGAGTTGGTCACGCAAGGATACCATTACAGTCGTCAGTGCTACTA
CCCCTGCCTATGCTAGATGATCCGTCTTACGCCTATTGTACCCACAACAA
TCCGCTTGGGCGAATTTTGCGACAGGTAATCCCAAAATCAGAGAAAGGGA
GCCACGAGAGACCCACGGTAGGGACAGCAAGGGCCGGAATGCCAGACTCA
TCTACTGTCTGGACGCGCGTTGTCTGCAATGATCTACTCAATTTACCTGG
TTTGTCTATCTTCCCAGCATGGCTGTCAGGCTACTTATTGCCTTGGTTGT
CTGTTGGAAATCATGTCGAAAATCATCTGTGCCATTGTCCCTGATCTTCC
AGCTGCTCTTACTATCCCCGTGTAACCACCCCGATCATTAACATGCCTAC
GGCGCCACCCGGGGATGTTGACTACTCCGCCGCTCTAAGCCAGGAGACTA
GCCTGGAGAGTGCTGATACGATCTTTGCGGAGAAAGACATTGTGCACGTT
GAAGAAGGAGAAGTCACATTACAAGATAGTGCATTAGAATCGGATGATCC
CCAAGACAAGGATGACCTCGTTGTGGACTGGGACGGGCCAAACGACCCTC
AGAACCCCATGAACTGGACCACCTTGCGGAAATGGGTCATTATCGGGTTG
ATATCCTTGAGCAGCTTCAACGTGTGAGTCCGACACGTCTACGCTAAGAC
TATGCATCCGTACGAGCATCTGAATTGACTGTCCCAGATCTATGGTATCC
ACGGTATTCGCTCCCGGCGTGCCGCAAGTTCTGAAAGAGTTCAATGTCCA
CAACCCATCCATTTCATCTCTTATGATTTCGATTTACGTGATGGGGTCTG
CTCTTGGCCCTCTGGTTCTGACGCCTCTCACTGAGATAAGCGGGAGACTT
CCCATGACACACCTGGCCAATATACTATTTGCAGTGGCTGCAGTTGTTTG
CGCCGCCAGTGTGAACATATCAATGCTCATAATGGCACGCTTCGTTATGG
GCATAGCCAGTTCCGTACCTGTGACGGTCGGTGGAGGCTTTGTTGCGGAT
ATGATTCCCATGGAGAAGAGAGGGACGGCAATGACGATCTGGACAGTTGG
TCCCCTCATGGTGAGTCTTAATCTACCCATTAGACGGTAACCATCAATGC
GGGTCTAATTTCTGCTGTAGGGTATGGTCACAGGACCGATTTATGGTGGT
TACATTGTCCAAAATATCGGATGGCGTTGGACAATCTGGATAGAGGCGAT
CCTTGTAAGTTGGCTCGATACCGTATCGTTAAACAAATTTCTAATGTGAT
TAGGGCGGGATCATCGTGATTGCTTCCCTTATATTTTTGCGGGAGACATA
TGCACCCACGCTGCTCCAGCGAAAGGCGAAGCGACTTCAGAAAGAGACTG
GACGTCCGTTCCGAACTCAATACGACATAGATAAGAAGATTGGCCAAATT
ATCTGGATTTCAATCAGCCGTCCGATCAAGTTTCTTTTCCTATCACCCAT
CGTTATGATCGTTTCTTTGTACAGCTCCATCACCTACAGCTATATGTACA
CACTATTCACTACTTTTACGAGCGTCTTCGAGAATGTGTACGGTTTTACT
CCCGGCGAAGCAGGTCTCGGCTACCTGGGACTGGGTCTCGGGTTCTGCTC
TGGACAGATCGTCGTGGGATACTATTCCGATCGATACCTCAAGAAGCAGG
AAAAGATCCATGGCAAGATGAAGCCAGAAGATCGACTTCCACCTTTAGTG
GTCGGATGCATTCTCGTCCCAATCGGACTCTTTTGGTACGGCTGGGCCGC
AGAATACCGGTTGCACTGGATAGTTCCCATCGCTGGGACCTTTTTCGTGG
GTGCAGGCATCTTCTTCGTTCATCTGGTTACACAGGTGTACCTGATTGAT
TCATATACTCTTTATGCTGCCAGCGCAGTATCTGCGGAGCTGGCTCTGCG
GTGCCTGTTCGGGGCTACGATCCCGTTGGCGGGTACTCCTTTGTACGATG
CCCTCGGGCTAGGATGGGGAAACAACCTACTAGGGTTTATCGCACTCTTG
TTTGTCCCAGCTTCGCTTTTCTTACTCAAGTATGGTGAGAGGATCCGGAC
GAATCCCAAATTTCAGCCGCAGATGACATGAATCTTTGTTTGGCCAATAT
TGTGAGCATAGCGATGGCGTCTGGTTAGCGTTTGATTTATACGAATATTG
ATGTTTTTGTTTAAACCTGCACGGTCATACTCAACACTGAAGTGATAATG
TACAGCACGGAGGACATGGGTTATCGATACATGCATGTCACATATCGCTG
TCGATTTGTTTCCTCAATAACGAATGTAAATACTAGCAAACAATCAAACA
GCGTGATATATCAAAG back to topCoding sequence (CDS) from alignment at ch4:5338967..5341832- >KJC3_006315-T1 ID=KJC3_006315-T1|Name=KJC3_006315-T1|organism=Aspergillus niger KJC3|type=CDS|length=6264bp|location=Sequence derived from alignment at ch4:5338967..5341832- (Aspergillus niger KJC3)
GGCGGGATCATCGTGATTGCTTCCCTTATATTTTTGCGGGAGACATATGC
ACCCACGCTGCTCCAGCGAAAGGCGAAGCGACTTCAGAAAGAGACTGGAC
GTCCGTTCCGAACTCAATACGACATAGATAAGAAGATTGGCCAAATTATC
TGGATTTCAATCAGCCGTCCGATCAAGTTTCTTTTCCTATCACCCATCGT
TATGATCGTTTCTTTGTACAGCTCCATCACCTACAGCTATATGTACACAC
TATTCACTACTTTTACGAGCGTCTTCGAGAATGTGTACGGTTTTACTCCC
GGCGAAGCAGGTCTCGGCTACCTGGGACTGGGTCTCGGGTTCTGCTCTGG
ACAGATCGTCGTGGGATACTATTCCGATCGATACCTCAAGAAGCAGGAAA
AGATCCATGGCAAGATGAAGCCAGAAGATCGACTTCCACCTTTAGTGGTC
GGATGCATTCTCGTCCCAATCGGACTCTTTTGGTACGGCTGGGCCGCAGA
ATACCGGTTGCACTGGATAGTTCCCATCGCTGGGACCTTTTTCGTGGGTG
CAGGCATCTTCTTCGTTCATCTGGTTACACAGGTGTACCTGATTGATTCA
TATACTCTTTATGCTGCCAGCGCAGTATCTGCGGAGCTGGCTCTGCGGTG
CCTGTTCGGGGCTACGATCCCGTTGGCGGGTACTCCTTTGTACGATGCCC
TCGGGCTAGGATGGGGAAACAACCTACTAGGGTTTATCGCACTCTTGTTT
GTCCCAGCTTCGCTTTTCTTACTCAAGTATGGTGAGAGGATCCGGACGAA
TCCCAAATTTCAGCCGCAGATGACATGAGGTATGGTCACAGGACCGATTT
ATGGTGGTTACATTGTCCAAAATATCGGATGGCGTTGGACAATCTGGATA
GAGGCGATCCTTATCTATGGTATCCACGGTATTCGCTCCCGGCGTGCCGC
AAGTTCTGAAAGAGTTCAATGTCCACAACCCATCCATTTCATCTCTTATG
ATTTCGATTTACGTGATGGGGTCTGCTCTTGGCCCTCTGGTTCTGACGCC
TCTCACTGAGATAAGCGGGAGACTTCCCATGACACACCTGGCCAATATAC
TATTTGCAGTGGCTGCAGTTGTTTGCGCCGCCAGTGTGAACATATCAATG
CTCATAATGGCACGCTTCGTTATGGGCATAGCCAGTTCCGTACCTGTGAC
GGTCGGTGGAGGCTTTGTTGCGGATATGATTCCCATGGAGAAGAGAGGGA
CGGCAATGACGATCTGGACAGTTGGTCCCCTCATGATGCCTACGGCGCCA
CCCGGGGATGTTGACTACTCCGCCGCTCTAAGCCAGGAGACTAGCCTGGA
GAGTGCTGATACGATCTTTGCGGAGAAAGACATTGTGCACGTTGAAGAAG
GAGAAGTCACATTACAAGATAGTGCATTAGAATCGGATGATCCCCAAGAC
AAGGATGACCTCGTTGTGGACTGGGACGGGCCAAACGACCCTCAGAACCC
CATGAACTGGACCACCTTGCGGAAATGGGTCATTATCGGGTTGATATCCT
TGAGCAGCTTCAACGTGGCGGGATCATCGTGATTGCTTCCCTTATATTTT
TGCGGGAGACATATGCACCCACGCTGCTCCAGCGAAAGGCGAAGCGACTT
CAGAAAGAGACTGGACGTCCGTTCCGAACTCAATACGACATAGATAAGAA
GATTGGCCAAATTATCTGGATTTCAATCAGCCGTCCGATCAAGTTTCTTT
TCCTATCACCCATCGTTATGATCGTTTCTTTGTACAGCTCCATCACCTAC
AGCTATATGTACACACTATTCACTACTTTTACGAGCGTCTTCGAGAATGT
GTACGGTTTTACTCCCGGCGAAGCAGGTCTCGGCTACCTGGGACTGGGTC
TCGGGTTCTGCTCTGGACAGATCGTCGTGGGATACTATTCCGATCGATAC
CTCAAGAAGCAGGAAAAGATCCATGGCAAGATGAAGCCAGAAGATCGACT
TCCACCTTTAGTGGTCGGATGCATTCTCGTCCCAATCGGACTCTTTTGGT
ACGGCTGGGCCGCAGAATACCGGTTGCACTGGATAGTTCCCATCGCTGGG
ACCTTTTTCGTGGGTGCAGGCATCTTCTTCGTTCATCTGGTTACACAGGT
GTACCTGATTGATTCATATACTCTTTATGCTGCCAGCGCAGTATCTGCGG
AGCTGGCTCTGCGGTGCCTGTTCGGGGCTACGATCCCGTTGGCGGGTACT
CCTTTGTACGATGCCCTCGGGCTAGGATGGGGAAACAACCTACTAGGGTT
TATCGCACTCTTGTTTGTCCCAGCTTCGCTTTTCTTACTCAAGTATGGTG
AGAGGATCCGGACGAATCCCAAATTTCAGCCGCAGATGACATGAGGTATG
GTCACAGGACCGATTTATGGTGGTTACATTGTCCAAAATATCGGATGGCG
TTGGACAATCTGGATAGAGGCGATCCTTATCTATGGTATCCACGGTATTC
GCTCCCGGCGTGCCGCAAGTTCTGAAAGAGTTCAATGTCCACAACCCATC
CATTTCATCTCTTATGATTTCGATTTACGTGATGGGGTCTGCTCTTGGCC
CTCTGGTTCTGACGCCTCTCACTGAGATAAGCGGGAGACTTCCCATGACA
CACCTGGCCAATATACTATTTGCAGTGGCTGCAGTTGTTTGCGCCGCCAG
TGTGAACATATCAATGCTCATAATGGCACGCTTCGTTATGGGCATAGCCA
GTTCCGTACCTGTGACGGTCGGTGGAGGCTTTGTTGCGGATATGATTCCC
ATGGAGAAGAGAGGGACGGCAATGACGATCTGGACAGTTGGTCCCCTCAT
GATGCCTACGGCGCCACCCGGGGATGTTGACTACTCCGCCGCTCTAAGCC
AGGAGACTAGCCTGGAGAGTGCTGATACGATCTTTGCGGAGAAAGACATT
GTGCACGTTGAAGAAGGAGAAGTCACATTACAAGATAGTGCATTAGAATC
GGATGATCCCCAAGACAAGGATGACCTCGTTGTGGACTGGGACGGGCCAA
ACGACCCTCAGAACCCCATGAACTGGACCACCTTGCGGAAATGGGTCATT
ATCGGGTTGATATCCTTGAGCAGCTTCAACGTGGCGGGATCATCGTGATT
GCTTCCCTTATATTTTTGCGGGAGACATATGCACCCACGCTGCTCCAGCG
AAAGGCGAAGCGACTTCAGAAAGAGACTGGACGTCCGTTCCGAACTCAAT
ACGACATAGATAAGAAGATTGGCCAAATTATCTGGATTTCAATCAGCCGT
CCGATCAAGTTTCTTTTCCTATCACCCATCGTTATGATCGTTTCTTTGTA
CAGCTCCATCACCTACAGCTATATGTACACACTATTCACTACTTTTACGA
GCGTCTTCGAGAATGTGTACGGTTTTACTCCCGGCGAAGCAGGTCTCGGC
TACCTGGGACTGGGTCTCGGGTTCTGCTCTGGACAGATCGTCGTGGGATA
CTATTCCGATCGATACCTCAAGAAGCAGGAAAAGATCCATGGCAAGATGA
AGCCAGAAGATCGACTTCCACCTTTAGTGGTCGGATGCATTCTCGTCCCA
ATCGGACTCTTTTGGTACGGCTGGGCCGCAGAATACCGGTTGCACTGGAT
AGTTCCCATCGCTGGGACCTTTTTCGTGGGTGCAGGCATCTTCTTCGTTC
ATCTGGTTACACAGGTGTACCTGATTGATTCATATACTCTTTATGCTGCC
AGCGCAGTATCTGCGGAGCTGGCTCTGCGGTGCCTGTTCGGGGCTACGAT
CCCGTTGGCGGGTACTCCTTTGTACGATGCCCTCGGGCTAGGATGGGGAA
ACAACCTACTAGGGTTTATCGCACTCTTGTTTGTCCCAGCTTCGCTTTTC
TTACTCAAGTATGGTGAGAGGATCCGGACGAATCCCAAATTTCAGCCGCA
GATGACATGAGGTATGGTCACAGGACCGATTTATGGTGGTTACATTGTCC
AAAATATCGGATGGCGTTGGACAATCTGGATAGAGGCGATCCTTATCTAT
GGTATCCACGGTATTCGCTCCCGGCGTGCCGCAAGTTCTGAAAGAGTTCA
ATGTCCACAACCCATCCATTTCATCTCTTATGATTTCGATTTACGTGATG
GGGTCTGCTCTTGGCCCTCTGGTTCTGACGCCTCTCACTGAGATAAGCGG
GAGACTTCCCATGACACACCTGGCCAATATACTATTTGCAGTGGCTGCAG
TTGTTTGCGCCGCCAGTGTGAACATATCAATGCTCATAATGGCACGCTTC
GTTATGGGCATAGCCAGTTCCGTACCTGTGACGGTCGGTGGAGGCTTTGT
TGCGGATATGATTCCCATGGAGAAGAGAGGGACGGCAATGACGATCTGGA
CAGTTGGTCCCCTCATGATGCCTACGGCGCCACCCGGGGATGTTGACTAC
TCCGCCGCTCTAAGCCAGGAGACTAGCCTGGAGAGTGCTGATACGATCTT
TGCGGAGAAAGACATTGTGCACGTTGAAGAAGGAGAAGTCACATTACAAG
ATAGTGCATTAGAATCGGATGATCCCCAAGACAAGGATGACCTCGTTGTG
GACTGGGACGGGCCAAACGACCCTCAGAACCCCATGAACTGGACCACCTT
GCGGAAATGGGTCATTATCGGGTTGATATCCTTGAGCAGCTTCAACGTGG
CGGGATCATCGTGATTGCTTCCCTTATATTTTTGCGGGAGACATATGCAC
CCACGCTGCTCCAGCGAAAGGCGAAGCGACTTCAGAAAGAGACTGGACGT
CCGTTCCGAACTCAATACGACATAGATAAGAAGATTGGCCAAATTATCTG
GATTTCAATCAGCCGTCCGATCAAGTTTCTTTTCCTATCACCCATCGTTA
TGATCGTTTCTTTGTACAGCTCCATCACCTACAGCTATATGTACACACTA
TTCACTACTTTTACGAGCGTCTTCGAGAATGTGTACGGTTTTACTCCCGG
CGAAGCAGGTCTCGGCTACCTGGGACTGGGTCTCGGGTTCTGCTCTGGAC
AGATCGTCGTGGGATACTATTCCGATCGATACCTCAAGAAGCAGGAAAAG
ATCCATGGCAAGATGAAGCCAGAAGATCGACTTCCACCTTTAGTGGTCGG
ATGCATTCTCGTCCCAATCGGACTCTTTTGGTACGGCTGGGCCGCAGAAT
ACCGGTTGCACTGGATAGTTCCCATCGCTGGGACCTTTTTCGTGGGTGCA
GGCATCTTCTTCGTTCATCTGGTTACACAGGTGTACCTGATTGATTCATA
TACTCTTTATGCTGCCAGCGCAGTATCTGCGGAGCTGGCTCTGCGGTGCC
TGTTCGGGGCTACGATCCCGTTGGCGGGTACTCCTTTGTACGATGCCCTC
GGGCTAGGATGGGGAAACAACCTACTAGGGTTTATCGCACTCTTGTTTGT
CCCAGCTTCGCTTTTCTTACTCAAGTATGGTGAGAGGATCCGGACGAATC
CCAAATTTCAGCCGCAGATGACATGAGGTATGGTCACAGGACCGATTTAT
GGTGGTTACATTGTCCAAAATATCGGATGGCGTTGGACAATCTGGATAGA
GGCGATCCTTATCTATGGTATCCACGGTATTCGCTCCCGGCGTGCCGCAA
GTTCTGAAAGAGTTCAATGTCCACAACCCATCCATTTCATCTCTTATGAT
TTCGATTTACGTGATGGGGTCTGCTCTTGGCCCTCTGGTTCTGACGCCTC
TCACTGAGATAAGCGGGAGACTTCCCATGACACACCTGGCCAATATACTA
TTTGCAGTGGCTGCAGTTGTTTGCGCCGCCAGTGTGAACATATCAATGCT
CATAATGGCACGCTTCGTTATGGGCATAGCCAGTTCCGTACCTGTGACGG
TCGGTGGAGGCTTTGTTGCGGATATGATTCCCATGGAGAAGAGAGGGACG
GCAATGACGATCTGGACAGTTGGTCCCCTCATGATGCCTACGGCGCCACC
CGGGGATGTTGACTACTCCGCCGCTCTAAGCCAGGAGACTAGCCTGGAGA
GTGCTGATACGATCTTTGCGGAGAAAGACATTGTGCACGTTGAAGAAGGA
GAAGTCACATTACAAGATAGTGCATTAGAATCGGATGATCCCCAAGACAA
GGATGACCTCGTTGTGGACTGGGACGGGCCAAACGACCCTCAGAACCCCA
TGAACTGGACCACCTTGCGGAAATGGGTCATTATCGGGTTGATATCCTTG
AGCAGCTTCAACGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006315-T1.utr3p1 | KJC3_006315-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5338967..5341832 - |
|
