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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5362349..5365351+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006326-T1 ID=KJC3_006326-T1|Name=KJC3_006326-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3003bp|location=Sequence derived from alignment at ch4:5362349..5365351+ (Aspergillus niger KJC3)
CATCATCATCATCATCATCATCATCATCACAAAGGAGCTGTATACAAAGA
GTATAGTATGCATGTATGCATGTATGTATGTATTTACGTGGGATACAGAA
TGTGTAGAGAATCAGTTAGGATTCGGAAAGTCACGACTCAAGAATCCTCC
GAAAGAGGCAAGAATGTTGGTAACAAAATAACAGCAAAAAAAGAAAGAAG
GCAAAAAGAGCAGGTGATGCCCTCGTGACCTGCCCGCATCCATCATCCCA
AATCCTCCCGTCAGGAACTCCAGCTTCATCCACTCCATTCTTTCTTAGCG
CTACTCCATCCAATCTCCAGTCTCTCTCCTCCTTCCCTCCATCTCGGTTC
GTCTCCATCCGCTTTTTCTCCGCCGGCGAAAACGGATTCCCCCCGATTCA
GGTACTCACCGTCCACATCTCCCCGTTTGTCGTAGCCTGCTCCGGCTCTC
TCCAGACAGTCTCTCCACTCTCTCCCCACTCCAAGACACGCTCTCGAAGC
ATCCAATGAACTCTCCGCCCCCTAGCTTCCGAATCTCCCACCTCGTTCGC
CTGTCTTCGGGCCCTTGAGATCTGGGCCCCCGTTTTTTCTTGCCATGGTC
CTACCCCGAGGATGGGGTCCTCCAATCCCTGGGATGGAGGCGAATTGCCG
ACGGATGGAGCGTCAAATTCTTTCACTTCCATTTTAGTGGCATTCACTCG
TTGACACCGTCATACTTACCGAGTTCATCTTTGTGTGCGGCCCCCCTCCC
CCCCCCTCTCCCCCTCTGCCCGGACCCCATATATATCCCTCCATCTCCCC
CGGGTCTGTCAGCCCTTTGGATGTCTTTCTCTCCCATCAATCTTCTCTTT
TTCCCATCTTCCCATCCCTGGCAGAGGATTCCGCGTTGTATGAATCCACC
GGCAACATGGGTGTCTCTAATATGATGTCCCGGTTCAAGCCTCAGGCGGA
CCACTCTGAGTCCTCCACTGAGGCTCCTACTCCTGCTCGCTCCAACTCCG
CCGTCGAGAAGGACAATGTCTTGCTCGATGACAGTCCCGTCAAGTACTTG
ACCTGGCGCTCCTTCATCCTGGGTATCGTCGTGTCCATGGGTGGTTTCAT
CTTCGGTTACTCTACTGGTATGGTGACATCGATTCTCTGCAGCTAGTCCC
CTCGGTTGCTAACCTTTTCCACCACCAGGTCAAATCTCTGGTTTCGAGAC
TATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGGATGGATCCT
ATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTGGTAAGTGGC
ATACATCATGGACTGTCCCTAGAGACCAACCCGACTGACAATCTCTTCAG
CTGTGTATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGA
CCGCATGGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCG
TCGGTATCATCATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCT
ATGGGTCGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGT
CCCCATGTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGG
TCAGTGCCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATC
ATCAACTTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCAC
CATGGGCATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCT
TCCTGCCCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAG
GCCCGTGAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGT
CATCGCCCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGG
CCGCCGGTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTC
TACCGTACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGG
TGCCAACTTTATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTC
TGAGCAACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGT
ATGACCCTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAG
TCTGATGGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTT
CCGTTGGTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCC
GCTGGTAAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGC
CACCACCTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCG
CCCGCTACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACC
TGGAACTTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGA
CTTCGCCTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCG
TTGTCTTCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTT
GACACCATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGT
TCCCCCGGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCA
AGCAGGAGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTC
CGCGAGTAAGCCACTCGCACTCGCGCGAACTCATTTTGCTAGTTGCTCTT
GTACATTGAACCTGCATCTTAAGCTTTGATTTATTTAATTGCATGATTGC
TCTTTGCATCGCATTTGCTAGCTAGCTATTATCGGCATGAATGCGTCCAC
GCACGCAATGTTTGAATGGCTTGACTCATCGGGAAGGATATGGTTGGGAA
CTACGACATCGGCGTTTGGTGATACCTGCAACTGCATACATCTGTTGACG
TTGAAATTTTTTTGAGGTTATTGAGAAACGATTTAATACAAGTATATACG
AAC back to topCoding sequence (CDS) from alignment at ch4:5362349..5365351+ >KJC3_006326-T1 ID=KJC3_006326-T1|Name=KJC3_006326-T1|organism=Aspergillus niger KJC3|type=CDS|length=5049bp|location=Sequence derived from alignment at ch4:5362349..5365351+ (Aspergillus niger KJC3)
ATGGGTGTCTCTAATATGATGTCCCGGTTCAAGCCTCAGGCGGACCACTC
TGAGTCCTCCACTGAGGCTCCTACTCCTGCTCGCTCCAACTCCGCCGTCG
AGAAGGACAATGTCTTGCTCGATGACAGTCCCGTCAAGTACTTGACCTGG
CGCTCCTTCATCCTGGGTATCGTCGTGTCCATGGGTGGTTTCATCTTCGG
TTACTCTACTGGTCAAATCTCTGGTTTCGAGACTATGGATGACTTCCTCC
AACGTTTCGGTCAGGAACAGGCGGATGGATCCTATGCTTTCAGCAACGTC
CGTAGTGGTCTCATTGTCGGTCTGCTGTGTATCGGTACTATGATCGGTGC
CCTGGTTGCTGCTCCTATCGCAGACCGCATGGGCCGCAAGCTCTCCATCT
GTCTCTGGTCTGTCATCCACATCGTCGGTATCATCATTCAGATTGCCACC
GACTCCAACTGGGTCCAGGTCGCTATGGGTCGTTGGGTTGCCGGTCTGGG
TGTTGGTGCCCTCTCCAGCATTGTCCCCATGTACCAGAGTGAATCTGCTC
CCCGTCAGGTCCGTGGTGCCATGGTCAGTGCCTTCCAGCTGTTCGTTGCC
TTCGGTATCTTCATCTCCTACATCATCAACTTCGGTACCGAGAGAATCCA
GTCGACTGCTTCCTGGCGTATCACCATGGGCATTGGCTTCGCCTGGCCCT
TGATTCTGGCTGTTGGCTCTCTCTTCCTGCCCGAGTCTCCTCGTTTCGCC
TACCGTCAGGGTCGTATCGATGAGGCCCGTGAGGTTATGTGCAAGCTGTA
CGGTGTCAGCCCGAACCACCGCGTCATCGCCCAGGAGATGAAGGACATGA
AGGACAAGCTCGACGAGGAGAAGGCCGCCGGTCAGGCTGCCTGGCACGAG
CTGTTCACCGGCCCTCGCATGCTCTACCGTACCCTGCTCGGTATTGCTCT
GCAGTCCCTCCAGCAGCTGACCGGTGCCAACTTTATCTTCTACTACGGAA
ACAGTATCTTCACCTCCACTGGTCTGAGCAACAGCTACGTCACTCAGATC
ATTCTGGGTGCTGTCAACTTCGGTATGACCCTGCCCGGTCTGTACGTCGT
CGAGCACTTCGGTCGTCGTAACAGTCTGATGGTTGGTGCTGCCTGGATGT
TCATTTGCTTCATGATCTGGGCTTCCGTTGGTCACTTCGCTCTGGATCTT
GCCGACCCTCAGGCCACTCCTGCCGCTGGTAAGGCCATGATCATCTTCAC
TTGCTTCTTCATTGTCGGTTTCGCCACCACCTGGGGTCCTATCGTCTGGG
CCATCTGTGGTGAGATGTACCCCGCCCGCTACCGTGCTCTCTGCATTGGT
ATTGCCACCGCTGCCAACTGGACCTGGAACTTCCTCATCTCCTTCTTCAC
CCCCTTCATCTCTAGCTCCATTGACTTCGCCTACGGCTACGTCTTTGCTG
GATGCTGTTTCGCCGCCATCTTCGTTGTCTTCTTCTTCGTCAATGAGACC
CAGGGTCGCACTCTTGAGGAGGTTGACACCATGTACGTGCTCCACGTCAA
GCCCTGGCAGAGTGCCAGCTGGGTTCCCCCGGAGGGCATTGTCCAGGACA
TGCACCGCCCCCCTTCCTCTTCCAAGCAGGAGGGTCAGGCTGAGATGGCT
GAGCACACCGAGCCCACTGAGCTCCGCGAGTAAATGGGTGTCTCTAATAT
GATGTCCCGGTTCAAGCCTCAGGCGGACCACTCTGAGTCCTCCACTGAGG
CTCCTACTCCTGCTCGCTCCAACTCCGCCGTCGAGAAGGACAATGTCTTG
CTCGATGACAGTCCCGTCAAGTACTTGACCTGGCGCTCCTTCATCCTGGG
TATCGTCGTGTCCATGGGTGGTTTCATCTTCGGTTACTCTACTGGTCAAA
TCTCTGGTTTCGAGACTATGGATGACTTCCTCCAACGTTTCGGTCAGGAA
CAGGCGGATGGATCCTATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGT
CGGTCTGCTGTGTATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTA
TCGCAGACCGCATGGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATC
CACATCGTCGGTATCATCATTCAGATTGCCACCGACTCCAACTGGGTCCA
GGTCGCTATGGGTCGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCA
GCATTGTCCCCATGTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGT
GCCATGGTCAGTGCCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTC
CTACATCATCAACTTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGC
GTATCACCATGGGCATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGC
TCTCTCTTCCTGCCCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTAT
CGATGAGGCCCGTGAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACC
ACCGCGTCATCGCCCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAG
GAGAAGGCCGCCGGTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCG
CATGCTCTACCGTACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGC
TGACCGGTGCCAACTTTATCTTCTACTACGGAAACAGTATCTTCACCTCC
ACTGGTCTGAGCAACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAA
CTTCGGTATGACCCTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTC
GTAACAGTCTGATGGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATC
TGGGCTTCCGTTGGTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCAC
TCCTGCCGCTGGTAAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCG
GTTTCGCCACCACCTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATG
TACCCCGCCCGCTACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAA
CTGGACCTGGAACTTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCT
CCATTGACTTCGCCTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCC
ATCTTCGTTGTCTTCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGA
GGAGGTTGACACCATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCA
GCTGGGTTCCCCCGGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCC
TCTTCCAAGCAGGAGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCAC
TGAGCTCCGCGAGTAAATGGGTGTCTCTAATATGATGTCCCGGTTCAAGC
CTCAGGCGGACCACTCTGAGTCCTCCACTGAGGCTCCTACTCCTGCTCGC
TCCAACTCCGCCGTCGAGAAGGACAATGTCTTGCTCGATGACAGTCCCGT
CAAGTACTTGACCTGGCGCTCCTTCATCCTGGGTATCGTCGTGTCCATGG
GTGGTTTCATCTTCGGTTACTCTACTGGTCAAATCTCTGGTTTCGAGACT
ATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGGATGGATCCTA
TGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTGCTGTGTATCG
GTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGACCGCATGGGC
CGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCGTCGGTATCAT
CATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCTATGGGTCGTT
GGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGTCCCCATGTAC
CAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGGTCAGTGCCTT
CCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATCATCAACTTCG
GTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCACCATGGGCATT
GGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCTTCCTGCCCGA
GTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAGGCCCGTGAGG
TTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGTCATCGCCCAG
GAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGGCCGCCGGTCA
GGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTCTACCGTACCC
TGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGGTGCCAACTTT
ATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTCTGAGCAACAG
CTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGTATGACCCTGC
CCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAGTCTGATGGTT
GGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTTCCGTTGGTCA
CTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCCGCTGGTAAGG
CCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGCCACCACCTGG
GGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCGCCCGCTACCG
TGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACCTGGAACTTCC
TCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGACTTCGCCTAC
GGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCGTTGTCTTCTT
CTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTTGACACCATGT
ACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGTTCCCCCGGAG
GGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCAAGCAGGAGGG
TCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTCCGCGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006326-T1.utr5p1 | KJC3_006326-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006326-T1.utr3p1 | KJC3_006326-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5362349..5365351 + |
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