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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5373977..5375434+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006331-T1 ID=KJC3_006331-T1|Name=KJC3_006331-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1458bp|location=Sequence derived from alignment at ch4:5373977..5375434+ (Aspergillus niger KJC3)
CTATGGGCTCCTCCGCTATGAAGAGGAGTCAATGACACGATGCCCATCTG
CATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCACATACAGTCGCG
CCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGCAATGTCCGCGC
TGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTCGTCGTGATCTT
CATTGATCTCGTCCTTATCAAGCCGCAGGTATGTGAATTGCACGCATAGG
TAATAGTCTCGCTGACGGATTACCAAGGTGTATCGCCATCTGCTTTTCAA
TCGGCTAGGGGGAGACGACAACCAATTCGATGTAAGCGCACGCTATCTAC
GTCCACCTACGACATTGCAGACTGCGACTAACACATCTCATTTGCTCAGC
GCTCCATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTG
ACATGGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTC
GCGCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGC
TGGCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTG
GCCCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGAC
AGAGGCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCC
CGTCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCG
ACACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATC
AACAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAA
CCCCACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCC
ACCGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAG
CCCAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCT
TCCCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCC
AATGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAAC
CGTCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCC
TCACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCG
TCCTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTAC
CAGCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGG
GCGCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTAT
ATCCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGG
GTTGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAG
TTGGTTAA back to topCoding sequence (CDS) from alignment at ch4:5373977..5375434+ >KJC3_006331-T1 ID=KJC3_006331-T1|Name=KJC3_006331-T1|organism=Aspergillus niger KJC3|type=CDS|length=3906bp|location=Sequence derived from alignment at ch4:5373977..5375434+ (Aspergillus niger KJC3)
ATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGCAC
ATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGACGC
AATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATTTC
GTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGCCA
TCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTCCA
TAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACATGG
GCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGCGC
GCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGCGA
CTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCCCA
ACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAGGC
GCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTCGC
AGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACACTG
AGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACAGT
AGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCCAC
AAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCGCC
CCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCAAC
CGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCCCA
TCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATGTT
TCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTCAT
GCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCACCG
CAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCTCG
CTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGCTA
TCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGCGG
CGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCCTG
CTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTGGC
TGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGGTT
AAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACAGC
ACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTGAC
GCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGATT
TCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATCGC
CATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGCTC
CATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGACAT
GGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGCGC
GCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTGGC
GACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGCCC
CAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAGAG
GCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCGTC
GCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGACAC
TGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAACA
GTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACCCC
ACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCACCG
CCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCCCA
ACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTCCC
CATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAATG
TTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCGTC
ATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTCAC
CGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTCCT
CGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCAGC
TATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGCGC
GGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATATCC
TGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGTTG
GCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTTGG
TTAAATGCCCATCTGCATCGAGTGCTCCTACCCGGTCTCTCATTTATACA
GCACATACAGTCGCGCCGATGACCGATCCCTGGGCAAAGGAGTGCGTCTG
ACGCAATGTCCGCGCTGCCAGCGGTTCGCGGACAAATACGTCGAGCATGA
TTTCGTCGTGATCTTCATTGATCTCGTCCTTATCAAGCCGCAGGTGTATC
GCCATCTGCTTTTCAATCGGCTAGGGGGAGACGACAACCAATTCGATCGC
TCCATAATCCGTCTAGGGATTCTACTACTCCTATTTGACGTCTACTTGAC
ATGGGCACGGATTGAGAAATCTCCATCACTCGCAACCACCTTCCTTTCGC
GCGCGCCCATCATCGTCCAATACCTCTTCTTCCTGAGCCTGAATGCGCTG
GCGACTCTTGCCCACCACCTTACCATCCGTCTTCTGGCATCGATCCTGGC
CCCAACGCCCCGCGGATATATTGGCTCTTCTCAGCATGGCAATGCGACAG
AGGCGCCTATCTTCTCCAATCCCTCCACACCCATACTCCCATCATTCCCG
TCGCAGACCAACAACAGCCAAACGCAGCTCTCGCCTACGCCAGCATCGAC
ACTGAGTCCGCCGAAGCTTACCCCACAAGGCTCCTCCAACGATGTATCAA
CAGTAGCGAGCGCTTCAGGCAGTGACATCCACCACCTCCCTCCTACAACC
CCACAAGGATCTTTCACCACCCTCCCACCACCTCTCCGACGTGCCTCCAC
CGCCCCAGCACAAAGCATCAGACCCCTTCCGCCCCCCTCACCAGCCAGCC
CAACCGCTATCAGCACCGCCTTGCTTGTCAGCAGTTGCGCGAAGCTCTTC
CCCATCCTTCTGGTCATATGGGGCCCGGACGGCAGCGGAAATGCGTCCAA
TGTTTCCGGCTCTAACAATACTTTGCTCAGCGCCGGTAGCCAGACAACCG
TCATGCAGCAGACATTGGATGGCAGCGGCCTCGCTCCCACGGCGACCCTC
ACCGCAGCTCACCCGACTGCCACGGGGACTTCGTCTCTGCCTGGTTCGTC
CTCGCTGCTGGAAAGTCTTCTCAGGATTATGCCCGAGTCTGTACCTACCA
GCTATCTGGCTAGCTTTATTGACCTGCTTGGACCGCTACTCTCTCTGGGC
GCGGCGGACACGCATCTCGTGCTGCTAAGCAACATCGAAGCATTGTATAT
CCTGCTTGGGTGCGGGTACCTGCGCGCGGTGGCATTAGCAGTGGCAGGGT
TGGCTGCTCGGTGGACTGTACAGAGGGTGATATTGGGGGCAGTTGGAGTT
GGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032366 | intracellular sterol transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006331-T1.utr5p1 | KJC3_006331-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007290 |
| DBxref | PFAM:PF04161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5373977..5375434 + |
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