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KJC3_006333-T1, KJC3_006333-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006333-T1
Unique NameKJC3_006333-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5376942..5378593-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006333-T1 ID=KJC3_006333-T1|Name=KJC3_006333-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1652bp|location=Sequence derived from alignment at ch4:5376942..5378593- (Aspergillus niger KJC3)
CGGCATGAAACCGTGGCGCTACCAGCGATACGAAGGCGGTGTCGCACCAA
TGAACGGAAAGTGGCCTCGACTCCGCGATCTGCACATCAACACCATCTTC
TCTCTGACCCTCCTATTGCAGACTTCCTGCATTTGTATTCAAATTAGATA
TATCGTGCTTTACTCGGAAACCCAAGAGACTTAGTGTCCAACTACATCAT
GGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGGTGAGATACTGTTCCCC
TCCGCAATAATTTCTCCGATTAGGAGACTGTCCGCATCTCCAGCGGCACT
CCGATGTTGTCATACAGCCAAGACTTCAACCCAAGCATCTATACTAACAT
GCTATGTCTTATCGAATAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCACT
CAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAACT
TCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGATTG
TCCACCAGAAGCTCCTTCAAGTGACGTGCGTAATATTTCCCCCCGTAACC
TCTCATCTCTCAGTCACCTAACATGTTGGCCCTATCACATGCAGTTCCCA
ATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCA
ACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCC
TCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAA
GCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAG
GTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACT
GCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCT
GGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCA
CTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAG
AACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGT
CAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGC
AGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATG
AAGAACGTACGTTGCTTCGTCTGCGTGGAAGAAAGTGTAAAGACTGACAG
GATTTTTCAGGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACT
TGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGC
GAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGGTATGATC
GATCAATATTCACAGGTGGTGTTTCATCGTGACTAATTGGCATCTTCCTG
CAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAATCGGTTGTTGCTG
GAATTTGTCGCCATTGTCTCGTGTCGTTTTGTTGCCGCCTGTTATTGGAA
ACTAGCCTCGTTTGATTCACCCTGTTTGTCTTGCGAAATTGTTCTATATC
CCTCGATGTGTGAATACGTGGGTTATTGACTGCTTGAAGTGTAAATTGTG
CAGTGTATATCGTAGACTGATACAGTATGACATTCGCCTACTATACTACT
AG
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Coding sequence (CDS) from alignment at ch4:5376942..5378593-

>KJC3_006333-T1 ID=KJC3_006333-T1|Name=KJC3_006333-T1|organism=Aspergillus niger KJC3|type=CDS|length=4590bp|location=Sequence derived from alignment at ch4:5376942..5378593- (Aspergillus niger KJC3)
GCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAGTCCTCGATACCCCGGA
ACCTCTGCGGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACA
AGCGGTCTTACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTG
CAGGTTGAGCAAGAGTTCCCAATACTCCAACGAGGCGTATGACTACCCGC
CCAACATTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGAGAAG
GTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCT
GACTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTA
TTGCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCAC
GGTGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGA
GAAGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCT
TCTTGGCTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGCGGCG
AAGGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAA
GGCAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGG
AGGCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACC
GAGGAGGCTGTGAGCGTGATGAAGAACCGCGAGCTTCTCGCCCTTTGCTG
CGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGG
ACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCT
GAAGATTGTCCACCAGAAGCTCCTTCAAGTGACATGGATAAGTTCCAGGC
GTTCGGAAAGAACCTCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTA
AGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGATCGCGG
CGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAGCTGGCT
CCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGTTCCCAATACTCCAACG
AGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCAACGACATGGGC
CGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGC
CGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCCGCAGCCCA
AGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTTCCCAGACT
CTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCGCTGGAGAA
GTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAGGATG
CTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTCTTAACACG
AACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAACGCTCGTCT
TATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGTGACT
GGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGGCGGAGGAT
GAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAGAACCGCGA
GCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTC
GGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTACATCGAGCTGGA
GAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGA
CATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGGCCAGCTACCGTAA
GAGCCGTGAGGGCGCTTAAGTCCTCGATACCCCGGAACCTCTGCGGAACC
TGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAG
ATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGA
GTTCCCAATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAA
TCCTTCAACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTC
CCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCT
CGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCT
CTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCT
GGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGG
CCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGG
AACACCACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAA
CGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGG
CCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAG
ATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAG
CGTGATGAAGAACCGCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAG
ATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGA
TGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACC
AGAAGCTCCTTCAAGTGACATGGATAAGTTCCAGGCGTTCGGAAAGAACC
TCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAGTCCTCGATACCC
CGGAACCTCTGCGGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGTAC
CACAAGCGGTCTTACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGATGG
CTTGCAGGTTGAGCAAGAGTTCCCAATACTCCAACGAGGCGTATGACTAC
CCGCCCAACATTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGA
GAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTG
CCCTGACTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCAC
GCTATTGCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTC
GCACGGTGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCAT
CGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCT
CGCTTCTTGGCTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGC
GGCGAAGGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGA
TCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGC
GAGGAGGCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACA
GACCGAGGAGGCTGTGAGCGTGATGAAGAACCGCGAGCTTCTCGCCCTTT
GCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGA
CCGGACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATG
CCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGACATGGATAAGTTCC
AGGCGTTCGGAAAGAACCTCAGGCCAGCTACCGTAAGAGCCGTGAGGGCG
CTTAAGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGATC
GCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAGCT
GGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGTTCCCAATACTCC
AACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCAACGACAT
GGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTC
CCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCCGCAG
CCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTTCCCA
GACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCGCTGG
AGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAG
GATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTCTTAA
CACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAACGCTC
GTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGT
GACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGGCGGA
GGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAGAACC
GCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCA
GCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTACATCGAGC
TGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAA
GTGACATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006333KJC3_006333Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006333-T1KJC3_006333-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006333-T1.cdsKJC3_006333-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006333-T1.utr3p1KJC3_006333-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006333-T1.exon5KJC3_006333-T1.exon5Aspergillus niger KJC3exon
KJC3_006333-T1.exon4KJC3_006333-T1.exon4Aspergillus niger KJC3exon
KJC3_006333-T1.exon3KJC3_006333-T1.exon3Aspergillus niger KJC3exon
KJC3_006333-T1.exon2KJC3_006333-T1.exon2Aspergillus niger KJC3exon
KJC3_006333-T1.exon1KJC3_006333-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006333-T1.utr5p1KJC3_006333-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR018859
DBxrefInterPro:IPR004148
DBxrefPFAM:PF10455
DBxrefPFAM:PF03114
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5376942..5378593 -
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