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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5405197..5407106- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006344-T1 ID=KJC3_006344-T1|Name=KJC3_006344-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1910bp|location=Sequence derived from alignment at ch4:5405197..5407106- (Aspergillus niger KJC3)
ATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGTGATGAACACAA
ACCAGAAAAATTGAACGTGGTGCAAGAACTAGACGAGGATACAGATGTCG
AGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTCGCACCACCAGA
TGGGAGATCTGGGCTTATTATGCGTGCGTTACAGACAATATTCTGTGTAC
TTGGTACTAAACAACAGCTATCAGTTACTATATAGGCAACAATGGCCTGT
CTCTATTCAGTAAGGCCCTCATTTGTCAATCACGGCCGTTTTCCCAGAAA
GAAAGCTAACAGCAAATACCGACTTTGCACCCACTGCCTGCCAGAACCTC
CTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAAGCA
ACGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCA
TCCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTTTGGCAAC
TGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCATCGG
CTTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCG
GACTATATATCGTCGGGCTGATCGCCTACCAGACCACGCTGACTTTCTGG
ACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGACGT
CGCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATG
CCGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTATGTGCAA
TCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTTCGC
ATTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCC
TCATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACCGTGGTTC
GTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATATTGT
TGTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGT
TGAAACAGAGCGTTATATATCTTATCGGTAGGGATATCTTCATTGTAGCT
ATTATATGTCACTTTGGTATCATGTACATACAACTGACAAAAGCATATGA
CAGGATACTTCCTCCTCGGCGATTCCCTCAACACAACAGTGACGGTCATA
TCCACCTTGCAAAACAGCATCGTCTCCTACAACACACTCCAATTGACCTA
TCTGCTCCTAGTCGGCATCGCAGCCCAGGCCGTCGGCATCTACGCCTTCT
GGTACGCCCAAAAACGCCTCAACCTCAGCACCAAAACCATGTTCAACCTC
ATAGCCATAGCCATCATCCTCCTCGACGGTTGGGGTATGATAGGCATCTG
GACCCAGAAGTTCGGCTTCCATCATCTCTGGGAAGTCTGGGTGAGTTCCC
CATCTTTCACACACACACACACACACACACACACACACACAACACCTCCC
TTATATACCACTAAAATATATATCCACCCACCCCCACCTCTCCACCAACT
GCTAACCCTTCATCCATGATCTAGCTTTATCAAGCCTACTACGGCCTCTT
CGTCTGCCCCTGGTACAGCTACTCCCAGATCATGATATCAGAAGTGACGC
CTCGCGGCCACGAATTTCTCTTCTTCAGTTTATTCAGTATCGTGGGCAAG
ACGTCCTCATTCATCGGGCCGCTCGTTTCAAGCGCCATCATCGATGCCTC
GCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCTTTTTGCGTTGAGTG
TGCTTAGTTTTGGGTTCTTGGTGGCCTTTTTGGATTTGGGAGTGAGTAGG
GAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGGAGGGTTGGATGGGGAGGA
ATTGGAGTAG back to topCoding sequence (CDS) from alignment at ch4:5405197..5407106- >KJC3_006344-T1 ID=KJC3_006344-T1|Name=KJC3_006344-T1|organism=Aspergillus niger KJC3|type=CDS|length=7980bp|location=Sequence derived from alignment at ch4:5405197..5407106- (Aspergillus niger KJC3)
CTTTATCAAGCCTACTACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTC
CCAGATCATGATATCAGAAGTGACGCCTCGCGGCCACGAATTTCTCTTCT
TCAGTTTATTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTC
GTTTCAAGCGCCATCATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCC
ATTCTATTTCCTTTTTGCGTTGAGTGTGCTTAGTTTTGGGTTCTTGGTGG
CCTTTTTGGATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAG
GGGAGGGGAGGGTTGGATGGGGAGGAATTGGAGTAGGATACTTCCTCCTC
GGCGATTCCCTCAACACAACAGTGACGGTCATATCCACCTTGCAAAACAG
CATCGTCTCCTACAACACACTCCAATTGACCTATCTGCTCCTAGTCGGCA
TCGCAGCCCAGGCCGTCGGCATCTACGCCTTCTGGTACGCCCAAAAACGC
CTCAACCTCAGCACCAAAACCATGTTCAACCTCATAGCCATAGCCATCAT
CCTCCTCGACGGTTGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCT
TCCATCATCTCTGGGAAGTCTGGCAAATACCGACTTTGCACCCACTGCCT
GCCAGAACCTCCTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTC
GCCGGAAAGCAACGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCAT
CTCCTTCGCCATCCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAG
ACTTTGGCAACTGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCA
TACGCCATCGGCTTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCA
CGTCGGAGTCGGACTATATATCGTCGGGCTGATCGCCTACCAGACCACGC
TGACTTTCTGGACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAG
ATGAAGGACGTCGCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGA
GTACGACCATGCCGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTT
TCTATGTGCAATCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGG
ATTATGTTCGCATTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGG
ATTGAGCGTCCTCATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGT
TACCGTGGTTCGTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGG
AGCAATATTGTTGTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACA
GGTTTGGAAGTTGAAACAGAGCGTTATATATCTTATCGTTACTATATAGG
CAACAATGGCCTGTCTCTATTCAATGGCTTCTCTTACCTCTGCCTCCAAT
CATCCATCTCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAAGA
ACTAGACGAGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCG
ACGACAACTTTCGCACCACCAGATGGGAGATCTGGGCTTATTATGCCTTT
ATCAAGCCTACTACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAG
ATCATGATATCAGAAGTGACGCCTCGCGGCCACGAATTTCTCTTCTTCAG
TTTATTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTT
CAAGCGCCATCATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTC
TATTTCCTTTTTGCGTTGAGTGTGCTTAGTTTTGGGTTCTTGGTGGCCTT
TTTGGATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGA
GGGGAGGGTTGGATGGGGAGGAATTGGAGTAGGATACTTCCTCCTCGGCG
ATTCCCTCAACACAACAGTGACGGTCATATCCACCTTGCAAAACAGCATC
GTCTCCTACAACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGC
AGCCCAGGCCGTCGGCATCTACGCCTTCTGGTACGCCCAAAAACGCCTCA
ACCTCAGCACCAAAACCATGTTCAACCTCATAGCCATAGCCATCATCCTC
CTCGACGGTTGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCA
TCATCTCTGGGAAGTCTGGCAAATACCGACTTTGCACCCACTGCCTGCCA
GAACCTCCTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCG
GAAAGCAACGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCC
TTCGCCATCCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTT
TGGCAACTGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACG
CCATCGGCTTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTC
GGAGTCGGACTATATATCGTCGGGCTGATCGCCTACCAGACCACGCTGAC
TTTCTGGACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGA
AGGACGTCGCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTAC
GACCATGCCGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTA
TGTGCAATCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTA
TGTTCGCATTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTG
AGCGTCCTCATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACC
GTGGTTCGTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCA
ATATTGTTGTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTT
TGGAAGTTGAAACAGAGCGTTATATATCTTATCGTTACTATATAGGCAAC
AATGGCCTGTCTCTATTCAATGGCTTCTCTTACCTCTGCCTCCAATCATC
CATCTCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAAGAACTA
GACGAGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGA
CAACTTTCGCACCACCAGATGGGAGATCTGGGCTTATTATGCCTTTATCA
AGCCTACTACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCA
TGATATCAGAAGTGACGCCTCGCGGCCACGAATTTCTCTTCTTCAGTTTA
TTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTTCAAG
CGCCATCATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATT
TCCTTTTTGCGTTGAGTGTGCTTAGTTTTGGGTTCTTGGTGGCCTTTTTG
GATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGG
AGGGTTGGATGGGGAGGAATTGGAGTAGGATACTTCCTCCTCGGCGATTC
CCTCAACACAACAGTGACGGTCATATCCACCTTGCAAAACAGCATCGTCT
CCTACAACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCC
CAGGCCGTCGGCATCTACGCCTTCTGGTACGCCCAAAAACGCCTCAACCT
CAGCACCAAAACCATGTTCAACCTCATAGCCATAGCCATCATCCTCCTCG
ACGGTTGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCAT
CTCTGGGAAGTCTGGCAAATACCGACTTTGCACCCACTGCCTGCCAGAAC
CTCCTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAA
GCAACGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCG
CCATCCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTTTGGC
AACTGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCAT
CGGCTTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAG
TCGGACTATATATCGTCGGGCTGATCGCCTACCAGACCACGCTGACTTTC
TGGACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGA
CGTCGCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACC
ATGCCGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTATGTG
CAATCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTT
CGCATTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCG
TCCTCATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACCGTGG
TTCGTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATAT
TGTTGTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGA
AGTTGAAACAGAGCGTTATATATCTTATCGTTACTATATAGGCAACAATG
GCCTGTCTCTATTCAATGGCTTCTCTTACCTCTGCCTCCAATCATCCATC
TCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAAGAACTAGACG
AGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAAC
TTTCGCACCACCAGATGGGAGATCTGGGCTTATTATGCCTTTATCAAGCC
TACTACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCATGAT
ATCAGAAGTGACGCCTCGCGGCCACGAATTTCTCTTCTTCAGTTTATTCA
GTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTTCAAGCGCC
ATCATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCT
TTTTGCGTTGAGTGTGCTTAGTTTTGGGTTCTTGGTGGCCTTTTTGGATT
TGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGGAGGG
TTGGATGGGGAGGAATTGGAGTAGGATACTTCCTCCTCGGCGATTCCCTC
AACACAACAGTGACGGTCATATCCACCTTGCAAAACAGCATCGTCTCCTA
CAACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCCCAGG
CCGTCGGCATCTACGCCTTCTGGTACGCCCAAAAACGCCTCAACCTCAGC
ACCAAAACCATGTTCAACCTCATAGCCATAGCCATCATCCTCCTCGACGG
TTGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCATCTCT
GGGAAGTCTGGCAAATACCGACTTTGCACCCACTGCCTGCCAGAACCTCC
TCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAAGCAA
CGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCAT
CCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTTTGGCAACT
GGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCATCGGC
TTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCGG
ACTATATATCGTCGGGCTGATCGCCTACCAGACCACGCTGACTTTCTGGA
CGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGACGTC
GCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATGC
CGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTATGTGCAAT
CGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTTCGCA
TTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCCT
CATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACCGTGGTTCG
TTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATATTGTT
GTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGTT
GAAACAGAGCGTTATATATCTTATCGTTACTATATAGGCAACAATGGCCT
GTCTCTATTCAATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGT
GATGAACACAAACCAGAAAAATTGAACGTGGTGCAAGAACTAGACGAGGA
TACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTC
GCACCACCAGATGGGAGATCTGGGCTTATTATGCCTTTATCAAGCCTACT
ACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCATGATATCA
GAAGTGACGCCTCGCGGCCACGAATTTCTCTTCTTCAGTTTATTCAGTAT
CGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTTCAAGCGCCATCA
TCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCTTTTT
GCGTTGAGTGTGCTTAGTTTTGGGTTCTTGGTGGCCTTTTTGGATTTGGG
AGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGGAGGGTTGG
ATGGGGAGGAATTGGAGTAGGATACTTCCTCCTCGGCGATTCCCTCAACA
CAACAGTGACGGTCATATCCACCTTGCAAAACAGCATCGTCTCCTACAAC
ACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCCCAGGCCGT
CGGCATCTACGCCTTCTGGTACGCCCAAAAACGCCTCAACCTCAGCACCA
AAACCATGTTCAACCTCATAGCCATAGCCATCATCCTCCTCGACGGTTGG
GGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCATCTCTGGGA
AGTCTGGCAAATACCGACTTTGCACCCACTGCCTGCCAGAACCTCCTCTC
CCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAAGCAACGAT
CCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCATCCAA
GTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTTTGGCAACTGGCG
ACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCATCGGCTTCG
CTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCGGACTA
TATATCGTCGGGCTGATCGCCTACCAGACCACGCTGACTTTCTGGACGGC
AGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGACGTCGCAG
AGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATGCCGAC
ACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTATGTGCAATCGGT
CGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTTCGCATTGA
ATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCCTCATT
GCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACCGTGGTTCGTTCT
GGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATATTGTTGTTG
CTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGTTGAAA
CAGAGCGTTATATATCTTATCGTTACTATATAGGCAACAATGGCCTGTCT
CTATTCAATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGTGATG
AACACAAACCAGAAAAATTGAACGTGGTGCAAGAACTAGACGAGGATACA
GATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTCGCAC
CACCAGATGGGAGATCTGGGCTTATTATGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR024671 |
| DBxref | PFAM:PF11700 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5405197..5407106 - |
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