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KJC3_006355-T1, KJC3_006355-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006355-T1
Unique NameKJC3_006355-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5447920..5449663+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006355-T1 ID=KJC3_006355-T1|Name=KJC3_006355-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1744bp|location=Sequence derived from alignment at ch4:5447920..5449663+ (Aspergillus niger KJC3)
AAGGCCGTATCTACATAGATCAGGGGAAGGCTTCACCCCCCTACCTCTTA
GGTTTCTGCAGCTGATCTTCGACGCGTCTTTGAATGTTTGTTCCCTGAAG
GTGGTGGCTAAAGGCTGGTTGCTGTGCACTCTGATTGATCGGTTTGATCG
TCTCGTCTCTGATTGGGGACACCGCACACGCCCACTATGGCTGGATTTGC
CGACTTTGACGCCGGTCATCGAGACCTAGTCTCGGTCACCAAATTCAATT
TTTACGGCAATCGCATTGTCACGGCTTCAACTGATCACCGCATGAAGGTC
TGGGACCAGAAAGACGGTGAATGGCAGCTCGTAGATACTTGGCGTGCCCA
TGACGCGGAGATCCGTGATGTAAGCACTCCCCACGGCAGTGGCCCCTTAT
TTCTTGGTATCTGGTCTGGTATCGTTTGGTTTTAACTGTTACTCAGGCGA
CCTGGAATGGCCCTTTCACGGGCCAGCACATTGGTAGCGTGGGCGAAGAC
ATGAAATGCAAGATATGGCAGGAGGATGTTACGCAACCCCCCAATTCAGG
CCGGCGTTTCAGGTCCATCTTTCGCATGACCGCCCCTCAGCGCCACCCAT
TTGTATCAATCGATTTTCGCAACATTGATCTGGAATCTTGGATGGCCGTT
ATTACTCGCGACGGCTACCTGATGATCATGGAGCCTGTAAGTCCCGACAC
TCTTGCGGACTGGCAGCCGTTAGATCAGTTTAGAGTCTGCACTGCTCCTC
AGCGAGGAGAAGAAACAAGCTTCAAAGTGCAGTTCCATCATGATCCTTCG
GACATCACGCATTCTGTATTGCCCTCTTCAGATCGCAAAAGTTTGTCGCT
GGTGGTAGCCGCCATGGACAGCGTAAAGATCTATCGCACTGATGCCAGTC
GACGTTTTTACCATGCCATCGAACTGACGGGACATGGTGGTCTTGTGAGA
GACATCTCTTGGGCCAATGGGTCAGTGAGGGGATATGACCTCATTGCTAG
TGGCTGCAAGGATGGCTTCATCCGGGTTTTCGAGGTATATACCACGGCCT
CTGGCTCTGGGTCACAAACTTCCAATGGCAACCACGCACATTCTTCATCG
CAGTCATCATCAATTCGTGCGACCACCCAGTCAGGTATCGGCTCTGCCCT
TGCAAGCCGTGCTCCTGTGTCGATGTCCAGTCGTGCCGCGCCCGCAGATT
CACAGTTCAAGCATTCGTTCAAGGAAATAGCATGCATTGACAGCAAGCAC
CTAGACGTGTGGCAAGTTGGCTTCTCATACGCTGGTTAGTAGCGGACCCC
TTTCGCAGTGAAACGTCTTGAGAATCTGCCTTCGGTGCTAATCAGTCTCT
ACACAGGTGACTGCCTTATTTCCTCAGGCGACGATGGTATTGTACGATTC
TGGAAGAAGTCCATCTCTGGAGAATGGCTCGAGTACGCTGAAACCGATAT
GGCTTGCCAATAGAGCCAAAGTCACCTTGCTGCTGCATTGCTTGAAGTCC
TGATTTCAACCTGGACTTAGCCTCTTCCCACTGTCTCTACGCACTGCAGG
AGCCATACACCCTGACTCTTTCCCGATACGTGACGGGGCTTCCTTTGCTG
CTCGTTTGGGTGATCATAGTGGTTTCAATTTGTTCGGACTGGCGTTTGTT
GCGGTCTAGCTATGGGAAGATTAGATCTCGACTTGTTCACCTTGCAGTCA
TTCTTGCTCTGTTTGGCATACAATGATACCCATGGATTTCTGGC
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Coding sequence (CDS) from alignment at ch4:5447920..5449663+

>KJC3_006355-T1 ID=KJC3_006355-T1|Name=KJC3_006355-T1|organism=Aspergillus niger KJC3|type=CDS|length=3384bp|location=Sequence derived from alignment at ch4:5447920..5449663+ (Aspergillus niger KJC3)
ATGGCTGGATTTGCCGACTTTGACGCCGGTCATCGAGACCTAGTCTCGGT
CACCAAATTCAATTTTTACGGCAATCGCATTGTCACGGCTTCAACTGATC
ACCGCATGAAGGTCTGGGACCAGAAAGACGGTGAATGGCAGCTCGTAGAT
ACTTGGCGTGCCCATGACGCGGAGATCCGTGATGCGACCTGGAATGGCCC
TTTCACGGGCCAGCACATTGGTAGCGTGGGCGAAGACATGAAATGCAAGA
TATGGCAGGAGGATGTTACGCAACCCCCCAATTCAGGCCGGCGTTTCAGG
TCCATCTTTCGCATGACCGCCCCTCAGCGCCACCCATTTGTATCAATCGA
TTTTCGCAACATTGATCTGGAATCTTGGATGGCCGTTATTACTCGCGACG
GCTACCTGATGATCATGGAGCCTGTAAGTCCCGACACTCTTGCGGACTGG
CAGCCGTTAGATCAGTTTAGAGTCTGCACTGCTCCTCAGCGAGGAGAAGA
AACAAGCTTCAAAGTGCAGTTCCATCATGATCCTTCGGACATCACGCATT
CTGTATTGCCCTCTTCAGATCGCAAAAGTTTGTCGCTGGTGGTAGCCGCC
ATGGACAGCGTAAAGATCTATCGCACTGATGCCAGTCGACGTTTTTACCA
TGCCATCGAACTGACGGGACATGGTGGTCTTGTGAGAGACATCTCTTGGG
CCAATGGGTCAGTGAGGGGATATGACCTCATTGCTAGTGGCTGCAAGGAT
GGCTTCATCCGGGTTTTCGAGGTATATACCACGGCCTCTGGCTCTGGGTC
ACAAACTTCCAATGGCAACCACGCACATTCTTCATCGCAGTCATCATCAA
TTCGTGCGACCACCCAGTCAGGTATCGGCTCTGCCCTTGCAAGCCGTGCT
CCTGTGTCGATGTCCAGTCGTGCCGCGCCCGCAGATTCACAGTTCAAGCA
TTCGTTCAAGGAAATAGCATGCATTGACAGCAAGCACCTAGACGTGTGGC
AAGTTGGCTTCTCATACGCTGGTGACTGCCTTATTTCCTCAGGCGACGAT
GGTATTGTACGATTCTGGAAGAAGTCCATCTCTGGAGAATGGCTCGAGTA
CGCTGAAACCGATATGGCTTGCCAATAGATGGCTGGATTTGCCGACTTTG
ACGCCGGTCATCGAGACCTAGTCTCGGTCACCAAATTCAATTTTTACGGC
AATCGCATTGTCACGGCTTCAACTGATCACCGCATGAAGGTCTGGGACCA
GAAAGACGGTGAATGGCAGCTCGTAGATACTTGGCGTGCCCATGACGCGG
AGATCCGTGATGCGACCTGGAATGGCCCTTTCACGGGCCAGCACATTGGT
AGCGTGGGCGAAGACATGAAATGCAAGATATGGCAGGAGGATGTTACGCA
ACCCCCCAATTCAGGCCGGCGTTTCAGGTCCATCTTTCGCATGACCGCCC
CTCAGCGCCACCCATTTGTATCAATCGATTTTCGCAACATTGATCTGGAA
TCTTGGATGGCCGTTATTACTCGCGACGGCTACCTGATGATCATGGAGCC
TGTAAGTCCCGACACTCTTGCGGACTGGCAGCCGTTAGATCAGTTTAGAG
TCTGCACTGCTCCTCAGCGAGGAGAAGAAACAAGCTTCAAAGTGCAGTTC
CATCATGATCCTTCGGACATCACGCATTCTGTATTGCCCTCTTCAGATCG
CAAAAGTTTGTCGCTGGTGGTAGCCGCCATGGACAGCGTAAAGATCTATC
GCACTGATGCCAGTCGACGTTTTTACCATGCCATCGAACTGACGGGACAT
GGTGGTCTTGTGAGAGACATCTCTTGGGCCAATGGGTCAGTGAGGGGATA
TGACCTCATTGCTAGTGGCTGCAAGGATGGCTTCATCCGGGTTTTCGAGG
TATATACCACGGCCTCTGGCTCTGGGTCACAAACTTCCAATGGCAACCAC
GCACATTCTTCATCGCAGTCATCATCAATTCGTGCGACCACCCAGTCAGG
TATCGGCTCTGCCCTTGCAAGCCGTGCTCCTGTGTCGATGTCCAGTCGTG
CCGCGCCCGCAGATTCACAGTTCAAGCATTCGTTCAAGGAAATAGCATGC
ATTGACAGCAAGCACCTAGACGTGTGGCAAGTTGGCTTCTCATACGCTGG
TGACTGCCTTATTTCCTCAGGCGACGATGGTATTGTACGATTCTGGAAGA
AGTCCATCTCTGGAGAATGGCTCGAGTACGCTGAAACCGATATGGCTTGC
CAATAGATGGCTGGATTTGCCGACTTTGACGCCGGTCATCGAGACCTAGT
CTCGGTCACCAAATTCAATTTTTACGGCAATCGCATTGTCACGGCTTCAA
CTGATCACCGCATGAAGGTCTGGGACCAGAAAGACGGTGAATGGCAGCTC
GTAGATACTTGGCGTGCCCATGACGCGGAGATCCGTGATGCGACCTGGAA
TGGCCCTTTCACGGGCCAGCACATTGGTAGCGTGGGCGAAGACATGAAAT
GCAAGATATGGCAGGAGGATGTTACGCAACCCCCCAATTCAGGCCGGCGT
TTCAGGTCCATCTTTCGCATGACCGCCCCTCAGCGCCACCCATTTGTATC
AATCGATTTTCGCAACATTGATCTGGAATCTTGGATGGCCGTTATTACTC
GCGACGGCTACCTGATGATCATGGAGCCTGTAAGTCCCGACACTCTTGCG
GACTGGCAGCCGTTAGATCAGTTTAGAGTCTGCACTGCTCCTCAGCGAGG
AGAAGAAACAAGCTTCAAAGTGCAGTTCCATCATGATCCTTCGGACATCA
CGCATTCTGTATTGCCCTCTTCAGATCGCAAAAGTTTGTCGCTGGTGGTA
GCCGCCATGGACAGCGTAAAGATCTATCGCACTGATGCCAGTCGACGTTT
TTACCATGCCATCGAACTGACGGGACATGGTGGTCTTGTGAGAGACATCT
CTTGGGCCAATGGGTCAGTGAGGGGATATGACCTCATTGCTAGTGGCTGC
AAGGATGGCTTCATCCGGGTTTTCGAGGTATATACCACGGCCTCTGGCTC
TGGGTCACAAACTTCCAATGGCAACCACGCACATTCTTCATCGCAGTCAT
CATCAATTCGTGCGACCACCCAGTCAGGTATCGGCTCTGCCCTTGCAAGC
CGTGCTCCTGTGTCGATGTCCAGTCGTGCCGCGCCCGCAGATTCACAGTT
CAAGCATTCGTTCAAGGAAATAGCATGCATTGACAGCAAGCACCTAGACG
TGTGGCAAGTTGGCTTCTCATACGCTGGTGACTGCCTTATTTCCTCAGGC
GACGATGGTATTGTACGATTCTGGAAGAAGTCCATCTCTGGAGAATGGCT
CGAGTACGCTGAAACCGATATGGCTTGCCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006355KJC3_006355Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006355-T1KJC3_006355-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006355-T1.utr5p1KJC3_006355-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006355-T1.exon1KJC3_006355-T1.exon1Aspergillus niger KJC3exon
KJC3_006355-T1.exon2KJC3_006355-T1.exon2Aspergillus niger KJC3exon
KJC3_006355-T1.exon3KJC3_006355-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006355-T1.cdsKJC3_006355-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006355-T1.utr3p1KJC3_006355-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5447920..5449663 +
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