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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5493755..5494881- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006368-T1 ID=KJC3_006368-T1|Name=KJC3_006368-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1127bp|location=Sequence derived from alignment at ch4:5493755..5494881- (Aspergillus niger KJC3)
ATGACCCCCAAAATCTCTCCCTCCTCATACCTCACCCCAGCATTTGTATC
CCGCTACCACCTTGCCGAGAAACTCACTGGCGTCTTCGTGGCCCCTCTCG
TCCAGCACTCTGGTATCCTGTCTACCCCGAGTAACAAACCTATGGCTGTC
TTCGACAATGCCTGCGGACTGGGAATTGTATCCAGCTATTTGAACAGCAC
GCTGCCTGAGGACGTCAAGAGACATTGGACGCTGACTTGCGGGGATATAA
CGGAGCTGATGGTGGAGTATACCAAGTTGCGAATTGAGAGGGAAGGGTGG
GTGAACGCTGAGGCGAAGGTCGTGGATGCTCAATGTACGGGGCTGCCGGC
GGATAAGTATACGCATGTGTTGACGGCTTTTGGTGAGTGGTATAATCTAT
GTGGTTCGTTGTGGAGGTTGTGGGGGGTGGGTGTGGTTTGAAGGAATGAG
TGGTTGACTGACTAAATTGATCGTCGACGTGGGTAGCTTTTATGATGATA
CCTGATGCGAGGGCTGCGATGAGAGGTGAGTATTATTACTGGTTCCGTTG
TGGTTATTTTGGATTGATACCTGAAGTGAAGCTGACAGTGTGTGATTGTT
AATGGTAGAATGCTTCCGTATCCTCCAGTCCGGGGGTGTACTTGCGACTT
CGACGTGGAGGACTTGTATGTCATTGATTTCCTCCCTTCATGATCGGGTC
AACCCGTCGCTCTATCAAGCTCTAACCAGAAGACAAATCAGCTTCGTGGC
TCGTCATCATGAAAGAAGCCATCGAAACCACGGCCTGGAACGTCAAGTTC
CCCACCATGAAAGAGTTCCTGGCCTTGCATAACGAAGGCTGGGACGACGA
GTCTTTCGTGAAAGCTCGGTTCGAAGAGGAAGGGTTCGAAGATGTGGAAG
TCACTGCTGTGCAGAGGGAGACCTCATTGACTATATCCGAATTCATGGAG
GTCGGTGGAGGAATGATCCCCATTGTGACCGGTGCCTTTTGGACACCCGA
GCAGCGGGAGAAGTATGAGGCGAAGGCACCGGTGGTGATCAGGGAGTATC
TGGAGGAGAAGTTTGGAGCTGATGGGGTGATTAGGATGGAGCCGGTGGCT
GTTCTTGCGGTGGGGAGAAAGCCCTAG back to topCoding sequence (CDS) from alignment at ch4:5493755..5494881- >KJC3_006368-T1 ID=KJC3_006368-T1|Name=KJC3_006368-T1|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch4:5493755..5494881- (Aspergillus niger KJC3)
CTTCGTGGCTCGTCATCATGAAAGAAGCCATCGAAACCACGGCCTGGAAC
GTCAAGTTCCCCACCATGAAAGAGTTCCTGGCCTTGCATAACGAAGGCTG
GGACGACGAGTCTTTCGTGAAAGCTCGGTTCGAAGAGGAAGGGTTCGAAG
ATGTGGAAGTCACTGCTGTGCAGAGGGAGACCTCATTGACTATATCCGAA
TTCATGGAGGTCGGTGGAGGAATGATCCCCATTGTGACCGGTGCCTTTTG
GACACCCGAGCAGCGGGAGAAGTATGAGGCGAAGGCACCGGTGGTGATCA
GGGAGTATCTGGAGGAGAAGTTTGGAGCTGATGGGGTGATTAGGATGGAG
CCGGTGGCTGTTCTTGCGGTGGGGAGAAAGCCCTAGAATGCTTCCGTATC
CTCCAGTCCGGGGGTGTACTTGCGACTTCGACGTGGAGGACTTCTTTTAT
GATGATACCTGATGCGAGGGCTGCGATGAGAGATGACCCCCAAAATCTCT
CCCTCCTCATACCTCACCCCAGCATTTGTATCCCGCTACCACCTTGCCGA
GAAACTCACTGGCGTCTTCGTGGCCCCTCTCGTCCAGCACTCTGGTATCC
TGTCTACCCCGAGTAACAAACCTATGGCTGTCTTCGACAATGCCTGCGGA
CTGGGAATTGTATCCAGCTATTTGAACAGCACGCTGCCTGAGGACGTCAA
GAGACATTGGACGCTGACTTGCGGGGATATAACGGAGCTGATGGTGGAGT
ATACCAAGTTGCGAATTGAGAGGGAAGGGTGGGTGAACGCTGAGGCGAAG
GTCGTGGATGCTCAATGTACGGGGCTGCCGGCGGATAAGTATACGCATGT
GTTGACGGCTTTTGCTTCGTGGCTCGTCATCATGAAAGAAGCCATCGAAA
CCACGGCCTGGAACGTCAAGTTCCCCACCATGAAAGAGTTCCTGGCCTTG
CATAACGAAGGCTGGGACGACGAGTCTTTCGTGAAAGCTCGGTTCGAAGA
GGAAGGGTTCGAAGATGTGGAAGTCACTGCTGTGCAGAGGGAGACCTCAT
TGACTATATCCGAATTCATGGAGGTCGGTGGAGGAATGATCCCCATTGTG
ACCGGTGCCTTTTGGACACCCGAGCAGCGGGAGAAGTATGAGGCGAAGGC
ACCGGTGGTGATCAGGGAGTATCTGGAGGAGAAGTTTGGAGCTGATGGGG
TGATTAGGATGGAGCCGGTGGCTGTTCTTGCGGTGGGGAGAAAGCCCTAG
AATGCTTCCGTATCCTCCAGTCCGGGGGTGTACTTGCGACTTCGACGTGG
AGGACTTCTTTTATGATGATACCTGATGCGAGGGCTGCGATGAGAGATGA
CCCCCAAAATCTCTCCCTCCTCATACCTCACCCCAGCATTTGTATCCCGC
TACCACCTTGCCGAGAAACTCACTGGCGTCTTCGTGGCCCCTCTCGTCCA
GCACTCTGGTATCCTGTCTACCCCGAGTAACAAACCTATGGCTGTCTTCG
ACAATGCCTGCGGACTGGGAATTGTATCCAGCTATTTGAACAGCACGCTG
CCTGAGGACGTCAAGAGACATTGGACGCTGACTTGCGGGGATATAACGGA
GCTGATGGTGGAGTATACCAAGTTGCGAATTGAGAGGGAAGGGTGGGTGA
ACGCTGAGGCGAAGGTCGTGGATGCTCAATGTACGGGGCTGCCGGCGGAT
AAGTATACGCATGTGTTGACGGCTTTTGCTTCGTGGCTCGTCATCATGAA
AGAAGCCATCGAAACCACGGCCTGGAACGTCAAGTTCCCCACCATGAAAG
AGTTCCTGGCCTTGCATAACGAAGGCTGGGACGACGAGTCTTTCGTGAAA
GCTCGGTTCGAAGAGGAAGGGTTCGAAGATGTGGAAGTCACTGCTGTGCA
GAGGGAGACCTCATTGACTATATCCGAATTCATGGAGGTCGGTGGAGGAA
TGATCCCCATTGTGACCGGTGCCTTTTGGACACCCGAGCAGCGGGAGAAG
TATGAGGCGAAGGCACCGGTGGTGATCAGGGAGTATCTGGAGGAGAAGTT
TGGAGCTGATGGGGTGATTAGGATGGAGCCGGTGGCTGTTCTTGCGGTGG
GGAGAAAGCCCTAGAATGCTTCCGTATCCTCCAGTCCGGGGGTGTACTTG
CGACTTCGACGTGGAGGACTTCTTTTATGATGATACCTGATGCGAGGGCT
GCGATGAGAGATGACCCCCAAAATCTCTCCCTCCTCATACCTCACCCCAG
CATTTGTATCCCGCTACCACCTTGCCGAGAAACTCACTGGCGTCTTCGTG
GCCCCTCTCGTCCAGCACTCTGGTATCCTGTCTACCCCGAGTAACAAACC
TATGGCTGTCTTCGACAATGCCTGCGGACTGGGAATTGTATCCAGCTATT
TGAACAGCACGCTGCCTGAGGACGTCAAGAGACATTGGACGCTGACTTGC
GGGGATATAACGGAGCTGATGGTGGAGTATACCAAGTTGCGAATTGAGAG
GGAAGGGTGGGTGAACGCTGAGGCGAAGGTCGTGGATGCTCAATGTACGG
GGCTGCCGGCGGATAAGTATACGCATGTGTTGACGGCTTTTGCTTCGTGG
CTCGTCATCATGAAAGAAGCCATCGAAACCACGGCCTGGAACGTCAAGTT
CCCCACCATGAAAGAGTTCCTGGCCTTGCATAACGAAGGCTGGGACGACG
AGTCTTTCGTGAAAGCTCGGTTCGAAGAGGAAGGGTTCGAAGATGTGGAA
GTCACTGCTGTGCAGAGGGAGACCTCATTGACTATATCCGAATTCATGGA
GGTCGGTGGAGGAATGATCCCCATTGTGACCGGTGCCTTTTGGACACCCG
AGCAGCGGGAGAAGTATGAGGCGAAGGCACCGGTGGTGATCAGGGAGTAT
CTGGAGGAGAAGTTTGGAGCTGATGGGGTGATTAGGATGGAGCCGGTGGC
TGTTCTTGCGGTGGGGAGAAAGCCCTAGAATGCTTCCGTATCCTCCAGTC
CGGGGGTGTACTTGCGACTTCGACGTGGAGGACTTCTTTTATGATGATAC
CTGATGCGAGGGCTGCGATGAGAGATGACCCCCAAAATCTCTCCCTCCTC
ATACCTCACCCCAGCATTTGTATCCCGCTACCACCTTGCCGAGAAACTCA
CTGGCGTCTTCGTGGCCCCTCTCGTCCAGCACTCTGGTATCCTGTCTACC
CCGAGTAACAAACCTATGGCTGTCTTCGACAATGCCTGCGGACTGGGAAT
TGTATCCAGCTATTTGAACAGCACGCTGCCTGAGGACGTCAAGAGACATT
GGACGCTGACTTGCGGGGATATAACGGAGCTGATGGTGGAGTATACCAAG
TTGCGAATTGAGAGGGAAGGGTGGGTGAACGCTGAGGCGAAGGTCGTGGA
TGCTCAATGTACGGGGCTGCCGGCGGATAAGTATACGCATGTGTTGACGG
CTTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR041698 |
| DBxref | PFAM:PF01209 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5493755..5494881 - |
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