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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5496638..5498814+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006370-T1 ID=KJC3_006370-T1|Name=KJC3_006370-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2177bp|location=Sequence derived from alignment at ch4:5496638..5498814+ (Aspergillus niger KJC3)
CGGACCCCCAGAAGCCTATTTTTTGTTCGGGATTGGAGAAACACATAGTG
GCTAAGGCACAGGACCCTTGAAGATGCGCCCCATACTTATCCTTACTTAC
TCTTCCGAAAGTTCTATACTTCCTTCGCATCATGTCACTTTCATGTTCAT
TCCCTCCTTTACATTCGTTCACACTCGTTCAACTCCTTTCTATCGTTATC
CAATGGTCTCAGGAACGGCCATTACCACTTCATCGATATAGTTGTCTTTC
TATCTTACGTGATAGAAGCGCCTCTCGCTTATGATAGTTTTCCAGTTTGC
CAGTCGAAATTCACTATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCT
CCTTGCCGGTATTACTATGGCCGAACTGGACCCTATAGTGATCAAGGTAC
GAGTTCGAGACAAAGCAATTCTACCATGCTTGTTTATCTCATGCCCTCTT
CTGGTCGCTGACTGCTCTTCTAGGGTAGCAAATTCTTCTTCAAGAGCAAC
GATACCCAATTGTATGTGCCCTTCATACGTACGATGTAAAGCTAGGCTTT
TACTAACTGGCATGCCTTTAGCTACATGCGTGGTGTTGCCTATCAGCGTA
GGAAGGTCCACTATCATGGTTTTGCTGGATAATTTCTGATGTACAGGCTG
ACCAATTTCTATAGAAGAACTGCCCAGCAGTAGTACTGGCGGCACCTATT
ACAAAGACATTCTGGCCGATACTACCGCCTGCAAGCGAGATGTTCCCCTC
TTGCAGGAACTCCGGACTAACACTATCCGTGTCTATTCGATCGACCCTGA
AGCGGACCATACTGAGTGCATGAAGCTCCTTACCGACGCCGGCATCTATG
TTGTGGTGGATATGGCGCAACCCGCGGAGTCGATCAACCGTAACGACCCA
TCGTGGGATAATGCCCTATATAAACGCTATACTGATGTGGTTGATGAGAT
GGCTAAATACACCAACACTATTGGGTTCTTTGCTGGGAACGAAGTCTCCA
ACCAGAAGAACAACACTCTTGCTAGCGCTTTTGTGAAGGCTGCTGTGCGC
GATATAAAGCGATATATCAAAGCTAAGAACTATCGCGCCATGGCTGTTGG
GTATGCCACCAATGACGACGCTGAAATTCGTGTGGATATGGCCAACTATT
TCAACTGTCAATCTGAGGAAGAAAGTATTGATTTCTGGGGCTACAATGTG
TACTCGTGGTGTGGAGACTCGTCTTATGAGAAATCTGGCTACAAAGCTCG
CACTGAGGAATTCGCTAATTATTCCGTTCCAGTGTTCTTTGCCGAGTATG
GTTGCAACCTTGTCAAGCCTCGCAAGTTCACTGATGTGGCTGCTCTCTAC
GGTGACCAGATGGCGAAGGTTTGGTCCGGGGGTATTGTCTATATGTACTT
CCAGGAAGCCAATGACTACGGTATGTTTAAGCTCTCTTTTTTCCCCCCTG
TCCATCTTCCCTAACGGAATCCATAGGTTTAGTAACCCTTAAGGGTGATA
CTGCCAGCAAGCTCCCCGACTTCTTCGGCTATTCTGAGCAAATCGCAAGC
GTCAATCCTACAGGTGTCAAGAAAGCCGACTATTCTCCTTCCAACACAGC
TCTTGAATCTTGCCCTACTATTGACGGCAACTGGTTTGCCAGAGCTAGTC
CACTACCCCCTTCTCCTAACCCCGATCTTTGCACATGCATGGATGCCTCT
TTGGAATGCGTGGTGAAGGACGATGTTTCGAATAAAACCTTTGCCGACCT
TTTCAATACCGTCTGTGGCTATGGGGTTTGTGATGGCATTTCCACTAATG
CAACTTCCGGTGAATACGGCTCCTACAGCGTGTGTAGTGCGAAGGAGAAA
TTGTCCTTTGCTTTCAACAGATACTATCAGGAACAAAAGGCCAAGGGCAA
CGCTGCGTCCGCTTGTGATTTCGCTGGCGCTGCGAGCACTAAAATCCCTA
AAAGTCCTAGTAGCACCTGCTCTAGCCTGCTCGATGCCGCAGGCGCTGAA
GGGACCCGCACAGTTACTGCTTCTCCGACCGGTGGCTCTGTTCTGAACTC
TCCATCTTCCAGTACTGGTGCCGCCCATCCTATGGCAACTGTTAGCAGCG
TAAATATTGGGCTGTGGCAGCTTGGCGCCTATGCAGTAACAGCGTTTGTC
GCTGGTTTCGCGATGATTCTTCTATAG back to topCoding sequence (CDS) from alignment at ch4:5496638..5498814+ >KJC3_006370-T1 ID=KJC3_006370-T1|Name=KJC3_006370-T1|organism=Aspergillus niger KJC3|type=CDS|length=8010bp|location=Sequence derived from alignment at ch4:5496638..5498814+ (Aspergillus niger KJC3)
ATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCTCCTTGCCGGTATTAC
TATGGCCGAACTGGACCCTATAGTGATCAAGGGTAGCAAATTCTTCTTCA
AGAGCAACGATACCCAATTCTACATGCGTGGTGTTGCCTATCAGCAAGAA
CTGCCCAGCAGTAGTACTGGCGGCACCTATTACAAAGACATTCTGGCCGA
TACTACCGCCTGCAAGCGAGATGTTCCCCTCTTGCAGGAACTCCGGACTA
ACACTATCCGTGTCTATTCGATCGACCCTGAAGCGGACCATACTGAGTGC
ATGAAGCTCCTTACCGACGCCGGCATCTATGTTGTGGTGGATATGGCGCA
ACCCGCGGAGTCGATCAACCGTAACGACCCATCGTGGGATAATGCCCTAT
ATAAACGCTATACTGATGTGGTTGATGAGATGGCTAAATACACCAACACT
ATTGGGTTCTTTGCTGGGAACGAAGTCTCCAACCAGAAGAACAACACTCT
TGCTAGCGCTTTTGTGAAGGCTGCTGTGCGCGATATAAAGCGATATATCA
AAGCTAAGAACTATCGCGCCATGGCTGTTGGGTATGCCACCAATGACGAC
GCTGAAATTCGTGTGGATATGGCCAACTATTTCAACTGTCAATCTGAGGA
AGAAAGTATTGATTTCTGGGGCTACAATGTGTACTCGTGGTGTGGAGACT
CGTCTTATGAGAAATCTGGCTACAAAGCTCGCACTGAGGAATTCGCTAAT
TATTCCGTTCCAGTGTTCTTTGCCGAGTATGGTTGCAACCTTGTCAAGCC
TCGCAAGTTCACTGATGTGGCTGCTCTCTACGGTGACCAGATGGCGAAGG
TTTGGTCCGGGGGTATTGTCTATATGTACTTCCAGGAAGCCAATGACTAC
GGTTTAGTAACCCTTAAGGGTGATACTGCCAGCAAGCTCCCCGACTTCTT
CGGCTATTCTGAGCAAATCGCAAGCGTCAATCCTACAGGTGTCAAGAAAG
CCGACTATTCTCCTTCCAACACAGCTCTTGAATCTTGCCCTACTATTGAC
GGCAACTGGTTTGCCAGAGCTAGTCCACTACCCCCTTCTCCTAACCCCGA
TCTTTGCACATGCATGGATGCCTCTTTGGAATGCGTGGTGAAGGACGATG
TTTCGAATAAAACCTTTGCCGACCTTTTCAATACCGTCTGTGGCTATGGG
GTTTGTGATGGCATTTCCACTAATGCAACTTCCGGTGAATACGGCTCCTA
CAGCGTGTGTAGTGCGAAGGAGAAATTGTCCTTTGCTTTCAACAGATACT
ATCAGGAACAAAAGGCCAAGGGCAACGCTGCGTCCGCTTGTGATTTCGCT
GGCGCTGCGAGCACTAAAATCCCTAAAAGTCCTAGTAGCACCTGCTCTAG
CCTGCTCGATGCCGCAGGCGCTGAAGGGACCCGCACAGTTACTGCTTCTC
CGACCGGTGGCTCTGTTCTGAACTCTCCATCTTCCAGTACTGGTGCCGCC
CATCCTATGGCAACTGTTAGCAGCGTAAATATTGGGCTGTGGCAGCTTGG
CGCCTATGCAGTAACAGCGTTTGTCGCTGGTTTCGCGATGATTCTTCTAT
AGATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCTCCTTGCCGGTATT
ACTATGGCCGAACTGGACCCTATAGTGATCAAGGGTAGCAAATTCTTCTT
CAAGAGCAACGATACCCAATTCTACATGCGTGGTGTTGCCTATCAGCAAG
AACTGCCCAGCAGTAGTACTGGCGGCACCTATTACAAAGACATTCTGGCC
GATACTACCGCCTGCAAGCGAGATGTTCCCCTCTTGCAGGAACTCCGGAC
TAACACTATCCGTGTCTATTCGATCGACCCTGAAGCGGACCATACTGAGT
GCATGAAGCTCCTTACCGACGCCGGCATCTATGTTGTGGTGGATATGGCG
CAACCCGCGGAGTCGATCAACCGTAACGACCCATCGTGGGATAATGCCCT
ATATAAACGCTATACTGATGTGGTTGATGAGATGGCTAAATACACCAACA
CTATTGGGTTCTTTGCTGGGAACGAAGTCTCCAACCAGAAGAACAACACT
CTTGCTAGCGCTTTTGTGAAGGCTGCTGTGCGCGATATAAAGCGATATAT
CAAAGCTAAGAACTATCGCGCCATGGCTGTTGGGTATGCCACCAATGACG
ACGCTGAAATTCGTGTGGATATGGCCAACTATTTCAACTGTCAATCTGAG
GAAGAAAGTATTGATTTCTGGGGCTACAATGTGTACTCGTGGTGTGGAGA
CTCGTCTTATGAGAAATCTGGCTACAAAGCTCGCACTGAGGAATTCGCTA
ATTATTCCGTTCCAGTGTTCTTTGCCGAGTATGGTTGCAACCTTGTCAAG
CCTCGCAAGTTCACTGATGTGGCTGCTCTCTACGGTGACCAGATGGCGAA
GGTTTGGTCCGGGGGTATTGTCTATATGTACTTCCAGGAAGCCAATGACT
ACGGTTTAGTAACCCTTAAGGGTGATACTGCCAGCAAGCTCCCCGACTTC
TTCGGCTATTCTGAGCAAATCGCAAGCGTCAATCCTACAGGTGTCAAGAA
AGCCGACTATTCTCCTTCCAACACAGCTCTTGAATCTTGCCCTACTATTG
ACGGCAACTGGTTTGCCAGAGCTAGTCCACTACCCCCTTCTCCTAACCCC
GATCTTTGCACATGCATGGATGCCTCTTTGGAATGCGTGGTGAAGGACGA
TGTTTCGAATAAAACCTTTGCCGACCTTTTCAATACCGTCTGTGGCTATG
GGGTTTGTGATGGCATTTCCACTAATGCAACTTCCGGTGAATACGGCTCC
TACAGCGTGTGTAGTGCGAAGGAGAAATTGTCCTTTGCTTTCAACAGATA
CTATCAGGAACAAAAGGCCAAGGGCAACGCTGCGTCCGCTTGTGATTTCG
CTGGCGCTGCGAGCACTAAAATCCCTAAAAGTCCTAGTAGCACCTGCTCT
AGCCTGCTCGATGCCGCAGGCGCTGAAGGGACCCGCACAGTTACTGCTTC
TCCGACCGGTGGCTCTGTTCTGAACTCTCCATCTTCCAGTACTGGTGCCG
CCCATCCTATGGCAACTGTTAGCAGCGTAAATATTGGGCTGTGGCAGCTT
GGCGCCTATGCAGTAACAGCGTTTGTCGCTGGTTTCGCGATGATTCTTCT
ATAGATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCTCCTTGCCGGTA
TTACTATGGCCGAACTGGACCCTATAGTGATCAAGGGTAGCAAATTCTTC
TTCAAGAGCAACGATACCCAATTCTACATGCGTGGTGTTGCCTATCAGCA
AGAACTGCCCAGCAGTAGTACTGGCGGCACCTATTACAAAGACATTCTGG
CCGATACTACCGCCTGCAAGCGAGATGTTCCCCTCTTGCAGGAACTCCGG
ACTAACACTATCCGTGTCTATTCGATCGACCCTGAAGCGGACCATACTGA
GTGCATGAAGCTCCTTACCGACGCCGGCATCTATGTTGTGGTGGATATGG
CGCAACCCGCGGAGTCGATCAACCGTAACGACCCATCGTGGGATAATGCC
CTATATAAACGCTATACTGATGTGGTTGATGAGATGGCTAAATACACCAA
CACTATTGGGTTCTTTGCTGGGAACGAAGTCTCCAACCAGAAGAACAACA
CTCTTGCTAGCGCTTTTGTGAAGGCTGCTGTGCGCGATATAAAGCGATAT
ATCAAAGCTAAGAACTATCGCGCCATGGCTGTTGGGTATGCCACCAATGA
CGACGCTGAAATTCGTGTGGATATGGCCAACTATTTCAACTGTCAATCTG
AGGAAGAAAGTATTGATTTCTGGGGCTACAATGTGTACTCGTGGTGTGGA
GACTCGTCTTATGAGAAATCTGGCTACAAAGCTCGCACTGAGGAATTCGC
TAATTATTCCGTTCCAGTGTTCTTTGCCGAGTATGGTTGCAACCTTGTCA
AGCCTCGCAAGTTCACTGATGTGGCTGCTCTCTACGGTGACCAGATGGCG
AAGGTTTGGTCCGGGGGTATTGTCTATATGTACTTCCAGGAAGCCAATGA
CTACGGTTTAGTAACCCTTAAGGGTGATACTGCCAGCAAGCTCCCCGACT
TCTTCGGCTATTCTGAGCAAATCGCAAGCGTCAATCCTACAGGTGTCAAG
AAAGCCGACTATTCTCCTTCCAACACAGCTCTTGAATCTTGCCCTACTAT
TGACGGCAACTGGTTTGCCAGAGCTAGTCCACTACCCCCTTCTCCTAACC
CCGATCTTTGCACATGCATGGATGCCTCTTTGGAATGCGTGGTGAAGGAC
GATGTTTCGAATAAAACCTTTGCCGACCTTTTCAATACCGTCTGTGGCTA
TGGGGTTTGTGATGGCATTTCCACTAATGCAACTTCCGGTGAATACGGCT
CCTACAGCGTGTGTAGTGCGAAGGAGAAATTGTCCTTTGCTTTCAACAGA
TACTATCAGGAACAAAAGGCCAAGGGCAACGCTGCGTCCGCTTGTGATTT
CGCTGGCGCTGCGAGCACTAAAATCCCTAAAAGTCCTAGTAGCACCTGCT
CTAGCCTGCTCGATGCCGCAGGCGCTGAAGGGACCCGCACAGTTACTGCT
TCTCCGACCGGTGGCTCTGTTCTGAACTCTCCATCTTCCAGTACTGGTGC
CGCCCATCCTATGGCAACTGTTAGCAGCGTAAATATTGGGCTGTGGCAGC
TTGGCGCCTATGCAGTAACAGCGTTTGTCGCTGGTTTCGCGATGATTCTT
CTATAGATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCTCCTTGCCGG
TATTACTATGGCCGAACTGGACCCTATAGTGATCAAGGGTAGCAAATTCT
TCTTCAAGAGCAACGATACCCAATTCTACATGCGTGGTGTTGCCTATCAG
CAAGAACTGCCCAGCAGTAGTACTGGCGGCACCTATTACAAAGACATTCT
GGCCGATACTACCGCCTGCAAGCGAGATGTTCCCCTCTTGCAGGAACTCC
GGACTAACACTATCCGTGTCTATTCGATCGACCCTGAAGCGGACCATACT
GAGTGCATGAAGCTCCTTACCGACGCCGGCATCTATGTTGTGGTGGATAT
GGCGCAACCCGCGGAGTCGATCAACCGTAACGACCCATCGTGGGATAATG
CCCTATATAAACGCTATACTGATGTGGTTGATGAGATGGCTAAATACACC
AACACTATTGGGTTCTTTGCTGGGAACGAAGTCTCCAACCAGAAGAACAA
CACTCTTGCTAGCGCTTTTGTGAAGGCTGCTGTGCGCGATATAAAGCGAT
ATATCAAAGCTAAGAACTATCGCGCCATGGCTGTTGGGTATGCCACCAAT
GACGACGCTGAAATTCGTGTGGATATGGCCAACTATTTCAACTGTCAATC
TGAGGAAGAAAGTATTGATTTCTGGGGCTACAATGTGTACTCGTGGTGTG
GAGACTCGTCTTATGAGAAATCTGGCTACAAAGCTCGCACTGAGGAATTC
GCTAATTATTCCGTTCCAGTGTTCTTTGCCGAGTATGGTTGCAACCTTGT
CAAGCCTCGCAAGTTCACTGATGTGGCTGCTCTCTACGGTGACCAGATGG
CGAAGGTTTGGTCCGGGGGTATTGTCTATATGTACTTCCAGGAAGCCAAT
GACTACGGTTTAGTAACCCTTAAGGGTGATACTGCCAGCAAGCTCCCCGA
CTTCTTCGGCTATTCTGAGCAAATCGCAAGCGTCAATCCTACAGGTGTCA
AGAAAGCCGACTATTCTCCTTCCAACACAGCTCTTGAATCTTGCCCTACT
ATTGACGGCAACTGGTTTGCCAGAGCTAGTCCACTACCCCCTTCTCCTAA
CCCCGATCTTTGCACATGCATGGATGCCTCTTTGGAATGCGTGGTGAAGG
ACGATGTTTCGAATAAAACCTTTGCCGACCTTTTCAATACCGTCTGTGGC
TATGGGGTTTGTGATGGCATTTCCACTAATGCAACTTCCGGTGAATACGG
CTCCTACAGCGTGTGTAGTGCGAAGGAGAAATTGTCCTTTGCTTTCAACA
GATACTATCAGGAACAAAAGGCCAAGGGCAACGCTGCGTCCGCTTGTGAT
TTCGCTGGCGCTGCGAGCACTAAAATCCCTAAAAGTCCTAGTAGCACCTG
CTCTAGCCTGCTCGATGCCGCAGGCGCTGAAGGGACCCGCACAGTTACTG
CTTCTCCGACCGGTGGCTCTGTTCTGAACTCTCCATCTTCCAGTACTGGT
GCCGCCCATCCTATGGCAACTGTTAGCAGCGTAAATATTGGGCTGTGGCA
GCTTGGCGCCTATGCAGTAACAGCGTTTGTCGCTGGTTTCGCGATGATTC
TTCTATAGATGAAGTTGTCTACTATTTTTGCCGGCGCAACCCTCCTTGCC
GGTATTACTATGGCCGAACTGGACCCTATAGTGATCAAGGGTAGCAAATT
CTTCTTCAAGAGCAACGATACCCAATTCTACATGCGTGGTGTTGCCTATC
AGCAAGAACTGCCCAGCAGTAGTACTGGCGGCACCTATTACAAAGACATT
CTGGCCGATACTACCGCCTGCAAGCGAGATGTTCCCCTCTTGCAGGAACT
CCGGACTAACACTATCCGTGTCTATTCGATCGACCCTGAAGCGGACCATA
CTGAGTGCATGAAGCTCCTTACCGACGCCGGCATCTATGTTGTGGTGGAT
ATGGCGCAACCCGCGGAGTCGATCAACCGTAACGACCCATCGTGGGATAA
TGCCCTATATAAACGCTATACTGATGTGGTTGATGAGATGGCTAAATACA
CCAACACTATTGGGTTCTTTGCTGGGAACGAAGTCTCCAACCAGAAGAAC
AACACTCTTGCTAGCGCTTTTGTGAAGGCTGCTGTGCGCGATATAAAGCG
ATATATCAAAGCTAAGAACTATCGCGCCATGGCTGTTGGGTATGCCACCA
ATGACGACGCTGAAATTCGTGTGGATATGGCCAACTATTTCAACTGTCAA
TCTGAGGAAGAAAGTATTGATTTCTGGGGCTACAATGTGTACTCGTGGTG
TGGAGACTCGTCTTATGAGAAATCTGGCTACAAAGCTCGCACTGAGGAAT
TCGCTAATTATTCCGTTCCAGTGTTCTTTGCCGAGTATGGTTGCAACCTT
GTCAAGCCTCGCAAGTTCACTGATGTGGCTGCTCTCTACGGTGACCAGAT
GGCGAAGGTTTGGTCCGGGGGTATTGTCTATATGTACTTCCAGGAAGCCA
ATGACTACGGTTTAGTAACCCTTAAGGGTGATACTGCCAGCAAGCTCCCC
GACTTCTTCGGCTATTCTGAGCAAATCGCAAGCGTCAATCCTACAGGTGT
CAAGAAAGCCGACTATTCTCCTTCCAACACAGCTCTTGAATCTTGCCCTA
CTATTGACGGCAACTGGTTTGCCAGAGCTAGTCCACTACCCCCTTCTCCT
AACCCCGATCTTTGCACATGCATGGATGCCTCTTTGGAATGCGTGGTGAA
GGACGATGTTTCGAATAAAACCTTTGCCGACCTTTTCAATACCGTCTGTG
GCTATGGGGTTTGTGATGGCATTTCCACTAATGCAACTTCCGGTGAATAC
GGCTCCTACAGCGTGTGTAGTGCGAAGGAGAAATTGTCCTTTGCTTTCAA
CAGATACTATCAGGAACAAAAGGCCAAGGGCAACGCTGCGTCCGCTTGTG
ATTTCGCTGGCGCTGCGAGCACTAAAATCCCTAAAAGTCCTAGTAGCACC
TGCTCTAGCCTGCTCGATGCCGCAGGCGCTGAAGGGACCCGCACAGTTAC
TGCTTCTCCGACCGGTGGCTCTGTTCTGAACTCTCCATCTTCCAGTACTG
GTGCCGCCCATCCTATGGCAACTGTTAGCAGCGTAAATATTGGGCTGTGG
CAGCTTGGCGCCTATGCAGTAACAGCGTTTGTCGCTGGTTTCGCGATGAT
TCTTCTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006370-T1.utr5p1 | KJC3_006370-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:GH72 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR004886 |
| DBxref | InterPro:IPR012946 |
| DBxref | PFAM:PF07983 |
| DBxref | PFAM:PF03198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5496638..5498814 + |
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