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KJC3_006375-T1, KJC3_006375-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006375-T1
Unique NameKJC3_006375-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5507726..5509475+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006375-T1 ID=KJC3_006375-T1|Name=KJC3_006375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1750bp|location=Sequence derived from alignment at ch4:5507726..5509475+ (Aspergillus niger KJC3)
CATCACTCCTCCTCCATCCCCAGCATTCTATCCAACGCCGCCTTGTTCTG
GGCCTCGAGCTTTACCTGTTTCATTCCGTTACCTTCAAGGCGGTCGCATA
CGCTAGTTTCGAGTCGCGACTCCCCATCCGACCCAACCAAGAGTCCACGT
TTCGTCCCTTACCCTCTACCTCGCTCATAGAGATCGTCACGACAATGCCA
GAAGAAGAGCCGTCTCTGAACATCCCCTCTCTCCTCACCCTCGCTGTGGT
GTCATTCTTCGTGCTGCGATGGTTTCTCAACCGCGATGGAGGAGAGGCCG
GACCCGGCAGCAGTCGCAGTCGGGCGCGAGGCACCGTCGACCCAGCCCAA
GTCGAGCAAATATCCCAGATGTTCCCTCAGCTCAGCGCCCGTGAGATCAT
GTGGGATTTGCAGCGCAACGGGGGAAGTGTTGCGGCGACAACGGAGAGAA
TCCTGACCGGTCGGGGCCTGGAAGTGGTGAGTTTATTCCCTTATTCCTTC
CTCTCTTGGATGCATCTTGACCTGCGTCGCTGGTCATTCATCATCTGCTC
CTCTTTCTTCCCCTATCTCGTTCCCCCGCATTGAGTCAGATGCATAGCCA
GCTAACCCAAACTACCTTGTAGCCGCCCCCATCCTTCCAACCTCAGATCG
CTATCCCCACTACGGCCCCTGTTCAATCACAACCCACTCAAACGGCGACC
TCCAAGGCCGATGCCCAGGACCTGATCTCCCGCTATAATCTCCGCGCGAA
ACTTGAGGCCGAGAACAGCGCCGCCGAGTCCGCACTGTCGCAGGCTTCTT
CCACGACAGGCTGGTCGCAGAGCAAGGAGGAGCGCCAGCGCTTGCTGCAG
AAGCGGAGGGACGAGATGATTCTGGCGGCGCGGAGGAAGATGATGCAGAA
GGATCAGGCTGCTCAATGAAGCTCGCCGGGCTTTGGGGACTGGAAAACCT
AGAACTACTATCTGGGGCCCCGGTATTGCGCGTCATAGGGGTAGGTAGAC
TGACGGCTTACTCGAAAAGGGTGTTTATTTATGCCTTTCATTCTGTATCC
AGTTGGATCATTTTTGCATGCTTCTTCTATCTCCTTCGGGTTGTTATATA
CCTCTTGTCGTCGGCGTTGGGGATGTAAGATTCAATCCATTGTTTCTGGC
ATTTTTGTTGTTTTCATCTGTCTTTCGGAGATTGACTTGTCATGTCCTTT
TCTATTATCTTCCCTCTCCTCTCTCTCTCATTTCAAGCTGAGCGTCGCAT
GCATCTGGTGTTCTTGATAGTGGGAATGATTGGGACTACTTACTACCTAT
CTACTACCTGCTTACTAGCACGACACCTGGCCCATCAACCAAGTAACTTC
CAACCAATGATATAGGGTATATATACATACATGTATCTGATGTATGTGCG
ATGCCAATATGATCATGTCCTGCCATGTCCCATACATATAGACTTGACAC
CCATAACTCCCATCATGTAACAAACAACGAACAATGAACCAACCCACGCA
TTGCAAATATAAAGCAAGAAAAGAAGAAGCATCTAAAACTCCATTTCATC
ATCATCGTCTTGTGTCCCATCATACCCCCCATTCGCCATTTCCTCTGCCA
TCTCTTCTCTCCTCGCCTGTTCCTTGGACGCCCCGATGCGCCTATCGACA
TGACTCGTTAGCAACCCACCTCCAACAACGATTGTGAAACAAAAGAATAG
AAGAAGTGACAAGGACATACCTCAGTCCATCCACCACCCCCGCAATGAAC
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Coding sequence (CDS) from alignment at ch4:5507726..5509475+

>KJC3_006375-T1 ID=KJC3_006375-T1|Name=KJC3_006375-T1|organism=Aspergillus niger KJC3|type=CDS|length=1158bp|location=Sequence derived from alignment at ch4:5507726..5509475+ (Aspergillus niger KJC3)
ATGCCAGAAGAAGAGCCGTCTCTGAACATCCCCTCTCTCCTCACCCTCGC
TGTGGTGTCATTCTTCGTGCTGCGATGGTTTCTCAACCGCGATGGAGGAG
AGGCCGGACCCGGCAGCAGTCGCAGTCGGGCGCGAGGCACCGTCGACCCA
GCCCAAGTCGAGCAAATATCCCAGATGTTCCCTCAGCTCAGCGCCCGTGA
GATCATGTGGGATTTGCAGCGCAACGGGGGAAGTGTTGCGGCGACAACGG
AGAGAATCCTGACCGGTCGGGGCCTGGAAGTGCCGCCCCCATCCTTCCAA
CCTCAGATCGCTATCCCCACTACGGCCCCTGTTCAATCACAACCCACTCA
AACGGCGACCTCCAAGGCCGATGCCCAGGACCTGATCTCCCGCTATAATC
TCCGCGCGAAACTTGAGGCCGAGAACAGCGCCGCCGAGTCCGCACTGTCG
CAGGCTTCTTCCACGACAGGCTGGTCGCAGAGCAAGGAGGAGCGCCAGCG
CTTGCTGCAGAAGCGGAGGGACGAGATGATTCTGGCGGCGCGGAGGAAGA
TGATGCAGAAGGATCAGGCTGCTCAATGAATGCCAGAAGAAGAGCCGTCT
CTGAACATCCCCTCTCTCCTCACCCTCGCTGTGGTGTCATTCTTCGTGCT
GCGATGGTTTCTCAACCGCGATGGAGGAGAGGCCGGACCCGGCAGCAGTC
GCAGTCGGGCGCGAGGCACCGTCGACCCAGCCCAAGTCGAGCAAATATCC
CAGATGTTCCCTCAGCTCAGCGCCCGTGAGATCATGTGGGATTTGCAGCG
CAACGGGGGAAGTGTTGCGGCGACAACGGAGAGAATCCTGACCGGTCGGG
GCCTGGAAGTGCCGCCCCCATCCTTCCAACCTCAGATCGCTATCCCCACT
ACGGCCCCTGTTCAATCACAACCCACTCAAACGGCGACCTCCAAGGCCGA
TGCCCAGGACCTGATCTCCCGCTATAATCTCCGCGCGAAACTTGAGGCCG
AGAACAGCGCCGCCGAGTCCGCACTGTCGCAGGCTTCTTCCACGACAGGC
TGGTCGCAGAGCAAGGAGGAGCGCCAGCGCTTGCTGCAGAAGCGGAGGGA
CGAGATGATTCTGGCGGCGCGGAGGAAGATGATGCAGAAGGATCAGGCTG
CTCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006375KJC3_006375Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006375-T1KJC3_006375-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006375-T1.utr5p1KJC3_006375-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006375-T1.exon1KJC3_006375-T1.exon1Aspergillus niger KJC3exon
KJC3_006375-T1.exon2KJC3_006375-T1.exon2Aspergillus niger KJC3exon
KJC3_006375-T1.exon3KJC3_006375-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006375-T1.cdsKJC3_006375-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006375-T1.utr3p1KJC3_006375-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_006375-T1.utr3p2KJC3_006375-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003892
DBxrefPFAM:PF02845
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5507726..5509475 +
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