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KJC3_006379-T1, KJC3_006379-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006379-T1
Unique NameKJC3_006379-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5514643..5515524-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006379-T1 ID=KJC3_006379-T1|Name=KJC3_006379-T1|organism=Aspergillus niger KJC3|type=mRNA|length=882bp|location=Sequence derived from alignment at ch4:5514643..5515524- (Aspergillus niger KJC3)
AATCAACAAATCCCCCCCACCTTCACCTTGTCTTTCCCAACTCACTACTT
ATTCTTCCCCTCTTCCTCCTCATCCCACCTACAACCACAACTCCCACTTC
CCAAACCACCCATCGAATAAACTCGACAGCCAAAATGTCCGTTCCCAACT
TCACCACCGCCCTCTCCGCCTCCATCAACAAGGAGAAGTTCACCCCCGAG
GTCCAGGCCGCCGCTGCCAAGGTCGACATCTCCGCCTTCTCCGCCGCCAT
CGAGGCCGTCCTTGCTGGCGAGGAGACCGCCACCGTCGAGGGCGAGCAGG
CTGCTGCCCTGAAGTCTGCCTTTGAGTTCGCTGTTGAACTTGTGAAGATG
CTGAACAAGGAGCCTGGTGTGGATGACAAGTTGAACGTATGACCGGCCCC
TCTTTTCTCCCTCGGTTGCTCCGTCCCTTTTGGAGGGGGAGAATGTAACG
ATTTACGCTGAAGGTATATGCTAATATGTGTGTCTGTGTGTAGCTCTACA
AGTACTTCAAGCGCTCGAGGAACGAGACTCCTGCTCAGCCTGGCATGTTT
GCTATGGAGGTATGTTTCCTTTTATCCATCTTGGATGTTTATATGTCCTT
TTCTCCGGATGCAAGATCTGTGATGAGAGTGGAGGGCTAACATGTTTGCT
TTGATGATATAGGCCAAGTACAAGTACAACGCATGGAAGGAAATCCAGCA
CATCAGCGAGGGCAGGGCCCAGGCCGAGTACATCAAGCAGGTTGACACTC
TGATTGGAAAGATTGGAACGAGGGAGTAGATTATAAACCTACAAGGTCAT
AAATGAGGAGATATCATGTGGTGGATACATTGTCTATTAGCAGGATGAGA
TGAGTTATGAGCTACTTACTACTCAACTAACT
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Coding sequence (CDS) from alignment at ch4:5514643..5515524-

>KJC3_006379-T1 ID=KJC3_006379-T1|Name=KJC3_006379-T1|organism=Aspergillus niger KJC3|type=CDS|length=1305bp|location=Sequence derived from alignment at ch4:5514643..5515524- (Aspergillus niger KJC3)
GCCAAGTACAAGTACAACGCATGGAAGGAAATCCAGCACATCAGCGAGGG
CAGGGCCCAGGCCGAGTACATCAAGCAGGTTGACACTCTGATTGGAAAGA
TTGGAACGAGGGAGTAGCTCTACAAGTACTTCAAGCGCTCGAGGAACGAG
ACTCCTGCTCAGCCTGGCATGTTTGCTATGGAGATGTCCGTTCCCAACTT
CACCACCGCCCTCTCCGCCTCCATCAACAAGGAGAAGTTCACCCCCGAGG
TCCAGGCCGCCGCTGCCAAGGTCGACATCTCCGCCTTCTCCGCCGCCATC
GAGGCCGTCCTTGCTGGCGAGGAGACCGCCACCGTCGAGGGCGAGCAGGC
TGCTGCCCTGAAGTCTGCCTTTGAGTTCGCTGTTGAACTTGTGAAGATGC
TGAACAAGGAGCCTGGTGTGGATGACAAGTTGAACGCCAAGTACAAGTAC
AACGCATGGAAGGAAATCCAGCACATCAGCGAGGGCAGGGCCCAGGCCGA
GTACATCAAGCAGGTTGACACTCTGATTGGAAAGATTGGAACGAGGGAGT
AGCTCTACAAGTACTTCAAGCGCTCGAGGAACGAGACTCCTGCTCAGCCT
GGCATGTTTGCTATGGAGATGTCCGTTCCCAACTTCACCACCGCCCTCTC
CGCCTCCATCAACAAGGAGAAGTTCACCCCCGAGGTCCAGGCCGCCGCTG
CCAAGGTCGACATCTCCGCCTTCTCCGCCGCCATCGAGGCCGTCCTTGCT
GGCGAGGAGACCGCCACCGTCGAGGGCGAGCAGGCTGCTGCCCTGAAGTC
TGCCTTTGAGTTCGCTGTTGAACTTGTGAAGATGCTGAACAAGGAGCCTG
GTGTGGATGACAAGTTGAACGCCAAGTACAAGTACAACGCATGGAAGGAA
ATCCAGCACATCAGCGAGGGCAGGGCCCAGGCCGAGTACATCAAGCAGGT
TGACACTCTGATTGGAAAGATTGGAACGAGGGAGTAGCTCTACAAGTACT
TCAAGCGCTCGAGGAACGAGACTCCTGCTCAGCCTGGCATGTTTGCTATG
GAGATGTCCGTTCCCAACTTCACCACCGCCCTCTCCGCCTCCATCAACAA
GGAGAAGTTCACCCCCGAGGTCCAGGCCGCCGCTGCCAAGGTCGACATCT
CCGCCTTCTCCGCCGCCATCGAGGCCGTCCTTGCTGGCGAGGAGACCGCC
ACCGTCGAGGGCGAGCAGGCTGCTGCCCTGAAGTCTGCCTTTGAGTTCGC
TGTTGAACTTGTGAAGATGCTGAACAAGGAGCCTGGTGTGGATGACAAGT
TGAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000062fatty-acyl-CoA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006379KJC3_006379Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006379-T1KJC3_006379-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006379-T1.cdsKJC3_006379-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006379-T1.utr3p1KJC3_006379-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006379-T1.exon3KJC3_006379-T1.exon3Aspergillus niger KJC3exon
KJC3_006379-T1.exon2KJC3_006379-T1.exon2Aspergillus niger KJC3exon
KJC3_006379-T1.exon1KJC3_006379-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006379-T1.utr5p1KJC3_006379-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR035984
DBxrefInterPro:IPR014352
DBxrefInterPro:IPR000582
DBxrefPFAM:PF00887
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5514643..5515524 -
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