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KJC3_006385-T1, KJC3_006385-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006385-T1
Unique NameKJC3_006385-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5528461..5530039-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006385-T1 ID=KJC3_006385-T1|Name=KJC3_006385-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch4:5528461..5530039- (Aspergillus niger KJC3)
ATGTCGAAATCCAAGGACAGCAGCTCCTCCGGGGGCTTTCACCAGGAGTA
CATTGCTTCTCTGCGCTACCGAAATGACCTGCCGCCTCCGGATATGCCCC
CGAAGTTCCTCGATATTCCACATGAGGGCTTGGACCGTTTTTTGACTCCG
GGATTTGCCTCCAATTTGGCTCGCCGTGAAGAACCTAACATTGATGTTGA
TGCTGAAGGTGGTATGCCAATCGACTTGGTCGGTATTCCCGGGCTTCACC
TGGGTGATGAGAGCGGTATGTATTTCGGCTTGCATGATCTGGTCTTTCTT
GCATTGGTGGCTGACAGTTGTTCGAAACACAGCGATTATGGCTCCTGAGA
ACCCGGAACCCATTGACCAAGCTGATTTGGCACTTCTGATGACGCCGGAG
CAGCTGAAGAACCCGGCACCGAAGAATACCAACGTCAGTTTCCTTCGCCG
TACGCAGTACATTTCCGCGGGTCTTCGGGCGCCTGATGGCCCCAAAGTCG
CTCCTATCCGGACGAAGCGTGGGACGGACAAAACTAAGTCGCAGGATGAC
CCTACCTACATCAAGAAATACCTCCAGAAAGGTTTCGATATTGCGTATCC
TCACAGCAAACACGTCGGTGAAGATACGGCTAGCAAGATCAAAGGCCACA
CTCCTACGAAGCTTGAACACGATGCATGGGCCCACCCAGTGCACCCTGAT
AACCCCAAGTTGAAGCCCGTCGGATTCTATCCGCTGCTCCCCGATCTGGA
AGGTTTCCCGGACCCAGGTGGTTTTGTCCAGTTCAAGTTCGACAAGGCGC
CTGTGCAGGACGTTTCAGGGAAGAGAGACAAGCGCATGGATGTGGCCATT
CTGCTTCCATCGGCACCGGAGGAGCGCGTTTGCCAAGAGCACAACACGAA
GGCAGCCTTGTATAAGACGAATCCCAATCTGTACCCTGACCCAGGTCCAA
TCCCATGGGATTACGATCTCTATCTACCTGAGAAGAAGGATGCGGCCAAG
AACGTTTCGGCGAGTCTGCGCATGACCAATCCGGACCGCGATAATGAAGC
GCTATACACTCACGAAGGAGCCGACAATACCAAGTTCCACCGCTTCGACC
GCGTCCGCACCTACGCTACGAGCGCTCAAACTTTGGGCAACGATCAGAAG
CAAAAGGACATCGCGTTGACGCTCTTTGACCCAGAGGAAGTGAAGGGTGG
AAACCGTGACGGTCTCGACTCAAGGCAAAAGGCCGCTTACTACTATCCCA
TTCTCGGAAAGACCCGTCTTAAGCCTGAGAGAGCCCGTACCATCGCCCAG
GCTGGTCTGGCGCCTACCCGTCCCAAGACCAAGGAGGACCAGGTCGATCA
GATCCAAGTGGCGGTGCGCGATCCTGACGAAGCGGAAGTCTACAAGCGGT
CCCTGCATAGGGCCGCCATTGACCCGAAGTTTGCCGAGTCGATGCCTCCA
CCCCCAGAGAATCAGGAGAACGATGTTGAACCAGCCAAGCAAGAGGAAGA
CGAAGGCGAGCACGACGTCGACCGTCAGGCCTCGCCTGAAGACGCGCACG
ACGATGCCGGCAATGAGAGTGACGAGTAA
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Coding sequence (CDS) from alignment at ch4:5528461..5530039-

>KJC3_006385-T1 ID=KJC3_006385-T1|Name=KJC3_006385-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch4:5528461..5530039- (Aspergillus niger KJC3)
CGATTATGGCTCCTGAGAACCCGGAACCCATTGACCAAGCTGATTTGGCA
CTTCTGATGACGCCGGAGCAGCTGAAGAACCCGGCACCGAAGAATACCAA
CGTCAGTTTCCTTCGCCGTACGCAGTACATTTCCGCGGGTCTTCGGGCGC
CTGATGGCCCCAAAGTCGCTCCTATCCGGACGAAGCGTGGGACGGACAAA
ACTAAGTCGCAGGATGACCCTACCTACATCAAGAAATACCTCCAGAAAGG
TTTCGATATTGCGTATCCTCACAGCAAACACGTCGGTGAAGATACGGCTA
GCAAGATCAAAGGCCACACTCCTACGAAGCTTGAACACGATGCATGGGCC
CACCCAGTGCACCCTGATAACCCCAAGTTGAAGCCCGTCGGATTCTATCC
GCTGCTCCCCGATCTGGAAGGTTTCCCGGACCCAGGTGGTTTTGTCCAGT
TCAAGTTCGACAAGGCGCCTGTGCAGGACGTTTCAGGGAAGAGAGACAAG
CGCATGGATGTGGCCATTCTGCTTCCATCGGCACCGGAGGAGCGCGTTTG
CCAAGAGCACAACACGAAGGCAGCCTTGTATAAGACGAATCCCAATCTGT
ACCCTGACCCAGGTCCAATCCCATGGGATTACGATCTCTATCTACCTGAG
AAGAAGGATGCGGCCAAGAACGTTTCGGCGAGTCTGCGCATGACCAATCC
GGACCGCGATAATGAAGCGCTATACACTCACGAAGGAGCCGACAATACCA
AGTTCCACCGCTTCGACCGCGTCCGCACCTACGCTACGAGCGCTCAAACT
TTGGGCAACGATCAGAAGCAAAAGGACATCGCGTTGACGCTCTTTGACCC
AGAGGAAGTGAAGGGTGGAAACCGTGACGGTCTCGACTCAAGGCAAAAGG
CCGCTTACTACTATCCCATTCTCGGAAAGACCCGTCTTAAGCCTGAGAGA
GCCCGTACCATCGCCCAGGCTGGTCTGGCGCCTACCCGTCCCAAGACCAA
GGAGGACCAGGTCGATCAGATCCAAGTGGCGGTGCGCGATCCTGACGAAG
CGGAAGTCTACAAGCGGTCCCTGCATAGGGCCGCCATTGACCCGAAGTTT
GCCGAGTCGATGCCTCCACCCCCAGAGAATCAGGAGAACGATGTTGAACC
AGCCAAGCAAGAGGAAGACGAAGGCGAGCACGACGTCGACCGTCAGGCCT
CGCCTGAAGACGCGCACGACGATGCCGGCAATGAGAGTGACGAGTAAATG
TCGAAATCCAAGGACAGCAGCTCCTCCGGGGGCTTTCACCAGGAGTACAT
TGCTTCTCTGCGCTACCGAAATGACCTGCCGCCTCCGGATATGCCCCCGA
AGTTCCTCGATATTCCACATGAGGGCTTGGACCGTTTTTTGACTCCGGGA
TTTGCCTCCAATTTGGCTCGCCGTGAAGAACCTAACATTGATGTTGATGC
TGAAGGTGGTATGCCAATCGACTTGGTCGGTATTCCCGGGCTTCACCTGG
GTGATGAGAGCGCGATTATGGCTCCTGAGAACCCGGAACCCATTGACCAA
GCTGATTTGGCACTTCTGATGACGCCGGAGCAGCTGAAGAACCCGGCACC
GAAGAATACCAACGTCAGTTTCCTTCGCCGTACGCAGTACATTTCCGCGG
GTCTTCGGGCGCCTGATGGCCCCAAAGTCGCTCCTATCCGGACGAAGCGT
GGGACGGACAAAACTAAGTCGCAGGATGACCCTACCTACATCAAGAAATA
CCTCCAGAAAGGTTTCGATATTGCGTATCCTCACAGCAAACACGTCGGTG
AAGATACGGCTAGCAAGATCAAAGGCCACACTCCTACGAAGCTTGAACAC
GATGCATGGGCCCACCCAGTGCACCCTGATAACCCCAAGTTGAAGCCCGT
CGGATTCTATCCGCTGCTCCCCGATCTGGAAGGTTTCCCGGACCCAGGTG
GTTTTGTCCAGTTCAAGTTCGACAAGGCGCCTGTGCAGGACGTTTCAGGG
AAGAGAGACAAGCGCATGGATGTGGCCATTCTGCTTCCATCGGCACCGGA
GGAGCGCGTTTGCCAAGAGCACAACACGAAGGCAGCCTTGTATAAGACGA
ATCCCAATCTGTACCCTGACCCAGGTCCAATCCCATGGGATTACGATCTC
TATCTACCTGAGAAGAAGGATGCGGCCAAGAACGTTTCGGCGAGTCTGCG
CATGACCAATCCGGACCGCGATAATGAAGCGCTATACACTCACGAAGGAG
CCGACAATACCAAGTTCCACCGCTTCGACCGCGTCCGCACCTACGCTACG
AGCGCTCAAACTTTGGGCAACGATCAGAAGCAAAAGGACATCGCGTTGAC
GCTCTTTGACCCAGAGGAAGTGAAGGGTGGAAACCGTGACGGTCTCGACT
CAAGGCAAAAGGCCGCTTACTACTATCCCATTCTCGGAAAGACCCGTCTT
AAGCCTGAGAGAGCCCGTACCATCGCCCAGGCTGGTCTGGCGCCTACCCG
TCCCAAGACCAAGGAGGACCAGGTCGATCAGATCCAAGTGGCGGTGCGCG
ATCCTGACGAAGCGGAAGTCTACAAGCGGTCCCTGCATAGGGCCGCCATT
GACCCGAAGTTTGCCGAGTCGATGCCTCCACCCCCAGAGAATCAGGAGAA
CGATGTTGAACCAGCCAAGCAAGAGGAAGACGAAGGCGAGCACGACGTCG
ACCGTCAGGCCTCGCCTGAAGACGCGCACGACGATGCCGGCAATGAGAGT
GACGAGTAAATGTCGAAATCCAAGGACAGCAGCTCCTCCGGGGGCTTTCA
CCAGGAGTACATTGCTTCTCTGCGCTACCGAAATGACCTGCCGCCTCCGG
ATATGCCCCCGAAGTTCCTCGATATTCCACATGAGGGCTTGGACCGTTTT
TTGACTCCGGGATTTGCCTCCAATTTGGCTCGCCGTGAAGAACCTAACAT
TGATGTTGATGCTGAAGGTGGTATGCCAATCGACTTGGTCGGTATTCCCG
GGCTTCACCTGGGTGATGAGAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016593Cdc73/Paf1 complex
Vocabulary: Biological Process
TermDefinition
GO:0016570histone modification
GO:0006368transcription elongation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006385KJC3_006385Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006385-T1KJC3_006385-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006385-T1.cdsKJC3_006385-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006385-T1.exon2KJC3_006385-T1.exon2Aspergillus niger KJC3exon
KJC3_006385-T1.exon1KJC3_006385-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09264331
DBxrefInterPro:IPR007133
DBxrefPFAM:PF03985
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5528461..5530039 -
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