You are here

Home

KJC3_006394-T1, KJC3_006394-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006394-T1
Unique NameKJC3_006394-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5550511..5551827+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006394-T1 ID=KJC3_006394-T1|Name=KJC3_006394-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1317bp|location=Sequence derived from alignment at ch4:5550511..5551827+ (Aspergillus niger KJC3)
ATCCCTTCCCTTTCCCCGACTGTTTCTCTTTTATCACGTCTGCAATTGAT
CTCTTCACACACATACTCTCTCTCTCCTCTCATATACTCGATAATCAGTA
ATTGCTCCAAATATGTTCTCCCGCCAGTGCTCCCGTCTCGTCTCCTCCCG
CACCGCTATCCCTCTGACATCCTTTCTTGCCCGCGGCCGCCCGTTCTCCG
CAACCGCAACCTCGGCATACGAGCACATCCTCACCTCGACCCCCAAGCCG
GGCGTAGGACTGAGTATGCCCCCATCTACTGTCCACTTCACTCAATAGCA
ATGGCAACAAGCATGTATCCAGTGCTAACCATAACCGCAATGGAAATGAA
ACAGTCACCCTCAACCGACCCAAAGCCCTCAACGCGCTCTCCAGTCCTCT
CTTCGAAGAACTCAATGATGCCCTAACCACTTACGACACGGACAAAGACA
TCGGCGCAATCGTCATTACCGGCAGCGAGAAAGCTTTTGCTGGTACTGTT
CCCAGACCATACCCCAACACCAAGCACAAGCACACCCGACTAACAACCCG
ATGATATAATCCAGCCGGCGCCGACATCAAAGAAATGGCCCCCCTAACCT
TCTCCTCCGCATACAGCAACAACTTCATCGCCCCCTGGTCACATCTCGCC
AACGCAATCCGCAAGCCCGTCATCGCCGCCGTCTCCGGCTACGCTCTGGG
CGGCGGCTGCGAACTTGCCCTAATGTGCGACATCATCTACTGCACGTCCA
CTGCGACCTTCGGACAGCCCGAGATCAAGCTGGGTGTTATCCCGGGAGCG
GGCGGGTCGCAGCGGCTCACGAAGGCGGTGGGGAAGAGTAAGGCGATGGA
GTTGATTCTGACGGGGAAGAACTTCAGTGGGAAGGAGGCGGGTGAGTGGG
GGGTTGCGGCGAGGGTGGTGGAGGGGGGTAAGGATGAGGTGGTGAATGCT
GCGGTTGAGACGGCGGAGACGATTGCGGGTTATTCGAGGGTTGCGGTGGT
GGCGGGTAAGGAGGTGGTTAATAAGGGATACGAGGTTGGGTTGAGGGAGG
GAGTGGAGTTTGAGAGGAGACTGTTTCACGGGTTGTTCGGGAGTAGGGAT
CAGAAGATTGGTGAGTATTCCTTTCTTCTTCTTTGAAAAGTAGGTGATGC
TGACGGTGGTAGGCATGACGGCGTTTGCGGAGAAGAAGAAGCCCGAGTGG
TCGAATGAGTAGATTGGAAGATGATGAGCTTTGGATGGTGAAGTGAGGTA
CCTGTTGATTGTCAATGTAGTAACCATCAAGCCCACCTAATGACTGAGTA
AGCATGAGAATGAATGC
back to top

Coding sequence (CDS) from alignment at ch4:5550511..5551827+

>KJC3_006394-T1 ID=KJC3_006394-T1|Name=KJC3_006394-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch4:5550511..5551827+ (Aspergillus niger KJC3)
ATGTTCTCCCGCCAGTGCTCCCGTCTCGTCTCCTCCCGCACCGCTATCCC
TCTGACATCCTTTCTTGCCCGCGGCCGCCCGTTCTCCGCAACCGCAACCT
CGGCATACGAGCACATCCTCACCTCGACCCCCAAGCCGGGCGTAGGACTG
ATCACCCTCAACCGACCCAAAGCCCTCAACGCGCTCTCCAGTCCTCTCTT
CGAAGAACTCAATGATGCCCTAACCACTTACGACACGGACAAAGACATCG
GCGCAATCGTCATTACCGGCAGCGAGAAAGCTTTTGCTGCCGGCGCCGAC
ATCAAAGAAATGGCCCCCCTAACCTTCTCCTCCGCATACAGCAACAACTT
CATCGCCCCCTGGTCACATCTCGCCAACGCAATCCGCAAGCCCGTCATCG
CCGCCGTCTCCGGCTACGCTCTGGGCGGCGGCTGCGAACTTGCCCTAATG
TGCGACATCATCTACTGCACGTCCACTGCGACCTTCGGACAGCCCGAGAT
CAAGCTGGGTGTTATCCCGGGAGCGGGCGGGTCGCAGCGGCTCACGAAGG
CGGTGGGGAAGAGTAAGGCGATGGAGTTGATTCTGACGGGGAAGAACTTC
AGTGGGAAGGAGGCGGGTGAGTGGGGGGTTGCGGCGAGGGTGGTGGAGGG
GGGTAAGGATGAGGTGGTGAATGCTGCGGTTGAGACGGCGGAGACGATTG
CGGGTTATTCGAGGGTTGCGGTGGTGGCGGGTAAGGAGGTGGTTAATAAG
GGATACGAGGTTGGGTTGAGGGAGGGAGTGGAGTTTGAGAGGAGACTGTT
TCACGGGTTGTTCGGGAGTAGGGATCAGAAGATTGGCATGACGGCGTTTG
CGGAGAAGAAGAAGCCCGAGTGGTCGAATGAGTAGATGTTCTCCCGCCAG
TGCTCCCGTCTCGTCTCCTCCCGCACCGCTATCCCTCTGACATCCTTTCT
TGCCCGCGGCCGCCCGTTCTCCGCAACCGCAACCTCGGCATACGAGCACA
TCCTCACCTCGACCCCCAAGCCGGGCGTAGGACTGATCACCCTCAACCGA
CCCAAAGCCCTCAACGCGCTCTCCAGTCCTCTCTTCGAAGAACTCAATGA
TGCCCTAACCACTTACGACACGGACAAAGACATCGGCGCAATCGTCATTA
CCGGCAGCGAGAAAGCTTTTGCTGCCGGCGCCGACATCAAAGAAATGGCC
CCCCTAACCTTCTCCTCCGCATACAGCAACAACTTCATCGCCCCCTGGTC
ACATCTCGCCAACGCAATCCGCAAGCCCGTCATCGCCGCCGTCTCCGGCT
ACGCTCTGGGCGGCGGCTGCGAACTTGCCCTAATGTGCGACATCATCTAC
TGCACGTCCACTGCGACCTTCGGACAGCCCGAGATCAAGCTGGGTGTTAT
CCCGGGAGCGGGCGGGTCGCAGCGGCTCACGAAGGCGGTGGGGAAGAGTA
AGGCGATGGAGTTGATTCTGACGGGGAAGAACTTCAGTGGGAAGGAGGCG
GGTGAGTGGGGGGTTGCGGCGAGGGTGGTGGAGGGGGGTAAGGATGAGGT
GGTGAATGCTGCGGTTGAGACGGCGGAGACGATTGCGGGTTATTCGAGGG
TTGCGGTGGTGGCGGGTAAGGAGGTGGTTAATAAGGGATACGAGGTTGGG
TTGAGGGAGGGAGTGGAGTTTGAGAGGAGACTGTTTCACGGGTTGTTCGG
GAGTAGGGATCAGAAGATTGGCATGACGGCGTTTGCGGAGAAGAAGAAGC
CCGAGTGGTCGAATGAGTAGATGTTCTCCCGCCAGTGCTCCCGTCTCGTC
TCCTCCCGCACCGCTATCCCTCTGACATCCTTTCTTGCCCGCGGCCGCCC
GTTCTCCGCAACCGCAACCTCGGCATACGAGCACATCCTCACCTCGACCC
CCAAGCCGGGCGTAGGACTGATCACCCTCAACCGACCCAAAGCCCTCAAC
GCGCTCTCCAGTCCTCTCTTCGAAGAACTCAATGATGCCCTAACCACTTA
CGACACGGACAAAGACATCGGCGCAATCGTCATTACCGGCAGCGAGAAAG
CTTTTGCTGCCGGCGCCGACATCAAAGAAATGGCCCCCCTAACCTTCTCC
TCCGCATACAGCAACAACTTCATCGCCCCCTGGTCACATCTCGCCAACGC
AATCCGCAAGCCCGTCATCGCCGCCGTCTCCGGCTACGCTCTGGGCGGCG
GCTGCGAACTTGCCCTAATGTGCGACATCATCTACTGCACGTCCACTGCG
ACCTTCGGACAGCCCGAGATCAAGCTGGGTGTTATCCCGGGAGCGGGCGG
GTCGCAGCGGCTCACGAAGGCGGTGGGGAAGAGTAAGGCGATGGAGTTGA
TTCTGACGGGGAAGAACTTCAGTGGGAAGGAGGCGGGTGAGTGGGGGGTT
GCGGCGAGGGTGGTGGAGGGGGGTAAGGATGAGGTGGTGAATGCTGCGGT
TGAGACGGCGGAGACGATTGCGGGTTATTCGAGGGTTGCGGTGGTGGCGG
GTAAGGAGGTGGTTAATAAGGGATACGAGGTTGGGTTGAGGGAGGGAGTG
GAGTTTGAGAGGAGACTGTTTCACGGGTTGTTCGGGAGTAGGGATCAGAA
GATTGGCATGACGGCGTTTGCGGAGAAGAAGAAGCCCGAGTGGTCGAATG
AGTAGATGTTCTCCCGCCAGTGCTCCCGTCTCGTCTCCTCCCGCACCGCT
ATCCCTCTGACATCCTTTCTTGCCCGCGGCCGCCCGTTCTCCGCAACCGC
AACCTCGGCATACGAGCACATCCTCACCTCGACCCCCAAGCCGGGCGTAG
GACTGATCACCCTCAACCGACCCAAAGCCCTCAACGCGCTCTCCAGTCCT
CTCTTCGAAGAACTCAATGATGCCCTAACCACTTACGACACGGACAAAGA
CATCGGCGCAATCGTCATTACCGGCAGCGAGAAAGCTTTTGCTGCCGGCG
CCGACATCAAAGAAATGGCCCCCCTAACCTTCTCCTCCGCATACAGCAAC
AACTTCATCGCCCCCTGGTCACATCTCGCCAACGCAATCCGCAAGCCCGT
CATCGCCGCCGTCTCCGGCTACGCTCTGGGCGGCGGCTGCGAACTTGCCC
TAATGTGCGACATCATCTACTGCACGTCCACTGCGACCTTCGGACAGCCC
GAGATCAAGCTGGGTGTTATCCCGGGAGCGGGCGGGTCGCAGCGGCTCAC
GAAGGCGGTGGGGAAGAGTAAGGCGATGGAGTTGATTCTGACGGGGAAGA
ACTTCAGTGGGAAGGAGGCGGGTGAGTGGGGGGTTGCGGCGAGGGTGGTG
GAGGGGGGTAAGGATGAGGTGGTGAATGCTGCGGTTGAGACGGCGGAGAC
GATTGCGGGTTATTCGAGGGTTGCGGTGGTGGCGGGTAAGGAGGTGGTTA
ATAAGGGATACGAGGTTGGGTTGAGGGAGGGAGTGGAGTTTGAGAGGAGA
CTGTTTCACGGGTTGTTCGGGAGTAGGGATCAGAAGATTGGCATGACGGC
GTTTGCGGAGAAGAAGAAGCCCGAGTGGTCGAATGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006394KJC3_006394Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006394-T1KJC3_006394-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006394-T1.utr5p1KJC3_006394-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006394-T1.exon1KJC3_006394-T1.exon1Aspergillus niger KJC3exon
KJC3_006394-T1.exon2KJC3_006394-T1.exon2Aspergillus niger KJC3exon
KJC3_006394-T1.exon3KJC3_006394-T1.exon3Aspergillus niger KJC3exon
KJC3_006394-T1.exon4KJC3_006394-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006394-T1.cdsKJC3_006394-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006394-T1.utr3p1KJC3_006394-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029045
DBxrefInterPro:IPR018376
DBxrefInterPro:IPR001753
DBxrefInterPro:IPR014748
DBxrefPFAM:PF16113
DBxrefPFAM:PF00378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5550511..5551827 +
Powered by Drupal