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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5566603..5571752+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006400-T1 ID=KJC3_006400-T1|Name=KJC3_006400-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5150bp|location=Sequence derived from alignment at ch4:5566603..5571752+ (Aspergillus niger KJC3)
GTATTGATTGTTGACTTCCCTCTCCTCTTCTTGCATTTCTGTCGCCTTTG
AAGCCTGGCCTGCGAGGCAGTTTGCTCATGATGTGTGGCTTGGACAACTA
ATCCCAACCAGATCTAGTTCTTGCCCTCCCCCCCTGACCCGTCCGTTCGG
TTGGGGTTGCCAGATTAAAGTTCCAGGTGTCATCTATACGCACCGGCTCC
ATACAACTGCATTCGTATGAGCCGATCATATGAGCAGCTGAAAGCCGAAC
ATTTGTCGCACTGATCCCTCGTTGTTACTTCTCTTAATATAACCATGTCT
GCCAATCCTGCCGACGATGGCGCTGCAAAGCCGCGCCTACACACGGCCCG
CTCGTTCCCAAGGATGGACACTCCCGAGACCAGCCCTTTCGTTCGTTCCA
GAGCCAAGACTGTTCAGTCCGTGGCAATACCAGAGTCGGTAGACGCCGAA
GCACTCCCGTTACCCTTGTCCACGTCCGAGGAGGACCGGAATAGCAGCCC
TGACCTGTTCGAGAAACCAGGCTCTGCCGACTTGGGGGACGATGCGCAGC
AGGGTGAGGAGACCTCGGTGCTCTCTCGAGGTAGCTTGGGTCACACGGAA
GAACTACCTATAGAGCTCGCAAGTATGACAGATAGGTACAGTCGGGCCTC
TACTCTCGCCACCCGGTAATGTGTTGCTGATTTAAATATTGGCAGATTTG
TCCACTCTCTTACTGCCAAGGTACATTCCTCTCCTCCTACAATCGAGAAA
GTATCGAGCCGGTTCCAAGAATTCTACGTCCGAGCAGAATCACACATAGC
TACTCACATCTCTGCTCTTGCTTCCCGGATAAATCGTGACCCTTCCCCGT
ACCGTGCGGCGCAGGGCAAGTCTAGTAATACAGGTTCAGATGGCCGTCAA
ATGTTGACAGCATCAGAAGTGACAGAAAGGAGGATTGCGCGAAAGCATCT
TGCAACCAAGCGTGTTGCTTTGGAAGAAGCTGTGGAACGGAGAGCTTGCG
AGACTATCTACGACAAGCTATGGAGGCATAAAAGCACACTGGATGAAATC
AGGGACGAGAAATTGCGATCAAAGACCGCGGCTCTCTCTGTAGTTGGTAT
TAATCTGAAGGATCTCGGCGTCGAAATCGACCTAAGTGCTATTGATGAAG
GGAAACAGAAAGAAGCAGATGAATGCCTTTCTGCTGCACGAGACTGCTTG
GCAAAGATGAACGATGACAAGTATCCTTTGGGCAAACTGCAGCAACTTGC
CGCCGCGCACAAGGCGATAGTTGATGCCTTGACTAAGCTCCTGCCATCTT
CTTCTTCCGCTGACGAGATACTGCCCACTCTGATCTATTCCTTGATCACT
TGCCCTCCTGAGGGGATCAACGTTATAAGCAATCTACAATTCATTCAACG
GTTTAGGTCGTCAAATAAGATAGACGGTGAAACCGCATATTGCTTGACTA
ACCTGGAAGCGGCTATTAGCTTTCTTGAGAATGTAGATCTGTCCGAATTG
CGCGGCGAGGAAGCCTTTGAAGGCCAGACCAAGGCGTCCAATGATGATTC
AACTGCGGCCGGCAAGATCGACTCTCTCCCATCTCCTACTACCATCAAGG
AAGCAGCAGTATCGTCGGTTACACCGGTGACAGCCTCACCTGAACTCTCG
AAGCCAGCTGGTCAAGAAGCTTCGGATAGCTTGCTCAGGCCTCAGTCATC
GGCGAGCACTCAACAACGGCGGCTGAACAATCTCTTTCAGCCCCCTGCTA
AAGTGCTCGGCGCTGCTAATGATGCTGTTCGTAACACTGCCGACCAGGGC
CTCAAGAACATTGGGGCATCCCTAGACAGCAGCTTCAACTTTCTGTTTGG
CCGCCTCAAAGAGTTGCAGTCCAACCAGTTCCCTGTCAAAGATGGGAATC
CGGTCCTGCCGAAGACGTTGGCAGATGCTCGACGTCTGGTCACCAACCCT
ATATCTACGGAGCATAGCCTGAACCAGGACGAAAATGCAGGAAGAGAGTC
TCGTCCCATTGATCGCCCACAATTAAGGCGCATCGGATCGAAGGCAGAGG
ATACATTCCTAGGGCTGGTCAGCGGCCAAAGAACTCCACGTGACCGGAGT
GTCGAGAGTGTACGGACTCAGGGCAGCTCCAGGAAAACAACAGTCTCCCA
AGGCCCGCAGAAGGAAGAGCCCCAGGCTTCCCCAGCAAGCGCGTCCTCCC
AGACGCCTACACCGCTTGAATCGGTGCGGAACTTTGGAAACACCCTCAAC
CCACTAAACCACATCCCCGGTATGATCCGCAACTTTGGACGTGGTGCCCC
TGGAACTCCTGACACTCCCGGTCCGATGCCATCATCCAACACTCCCACCG
AGAGAATCAGGGCCTCGATCCTCTCCCGCGAGACATCCTCATCAAGCGTC
CCCAGCGCTCCACCCCGGGTAGAGCGGGTCGACCCGCCTATTCAGCGTTT
CCTCCAGTTGCAGAACGCCAATGAGCTCACCATCGCCGACGTATCTGTTT
TGTTGGACGACTACAAGCGCCTTGCAGCAGCGCTATCGAAACAGAATCCC
TGAACCTGACTGAAATCCTTCGCTATCATCATTCTCAACCTTTTCTTTTC
CTAAAGCATATGATTCCCACATGGTTGTTCATACTATCTCCCTTTCTCGT
TGTATCCATTTTCTCTTCATGGCGATTTCGCGTTTCATGTTTTTTTTTGT
GTGTTATGTCATTGAGATTGTAGACCACTGCTGGTGTTCAGTGTTTCAAA
GTGTGCAGGTTCAGTCCGGTCTTGCATTTGCAGCCATTTGGGTCAAAGTC
ATAGCTAGCAGTGCTAGTGTTTAATCAAATGCGGATTTTATTTGAAGCTA
TATTAGCTATGGGATTATATATGAGGGGTATAATGATATTGCTAATTGAT
ATGAGGAAGAATCAGCAGGGCCATACATAACAAAAGCAGTAACTGACATG
GTACAGTAAGAAAGGTGGTCTGGTCATCCTCACGTAAGCTCTATCATAAA
CCTTGAATATCCCGAGAAAGAGAAAAACAACAAGCAAATCAATACAGTCT
GAACTCATTAATAATGAGAGCAATGATGAAATGTTGGTAAAGTGCATAAT
TCAGCCCATACACTCACATGTCACAAACCCAATAAGAATTGTGGGAGGGG
GGGGTGTAAGAAAAAGAAAAATAAATATGACAAGCGCGTACAGCCTTCCC
CAAAGAACAAGGCCATTAAGTATATGCAACTCATCTCACCTCACTTCATT
TGCGTATAACAAATATCAAATCACGTCGAATCAAGGCGTCCTTCCCTTCA
ACACCTCCGCCCCGCCACTCCTCATTTCCTCCAATTTCCTCGTCAGATCA
GCAGACTGCTCCTCCACGACCTCATTCCTCCGAGCGATTTCCGCTTCAAA
CAACGCCGCCGTTTTGCGTCTTGCATGGCGTAGATCTTTCATCTTGGAGA
GGGCGTCACTGAATTGGTCGATTAGGAGATCACCGTAATCTTCCCATTCG
TTCATGGTAAGGGTGGAGAAGAAGTCGCGGCGGTCTTTGTCTTCCGAGTT
CATTAGGAAATCCATTTTCTCGTCGGAGGTGGCGTTAGGGCCGGGGGTTG
GGGCTGGCGTGGTGGTTTTGACGGGTGCACTTGCTGTTGCGGTTGGGGTG
TGGTCGAAGGGTTCAGATTGGAGGTCCTTGAAGGATTTTTGGCGCAGGAT
TTCGGGTGGATAGTCGGATTCGAGGTTTCGTCTTTTGTTTTGGCTGCTAC
TGCTGGTTATGGTGCTCTTGTTGGGTTGGAAGTCGGGGTCTGAGACGATG
CGTTGGACGGAGTTGCGGCGCGCGAACGGGTCGTTGATTGGGTCGTTGTC
ATCGTCGACATCTAGGTCGTCGATGTTGGTCATGTCGAAGGTGCTTAGGG
GTGGTAGGCTGTCGCGGCTGGTGTTGAAGAGGTGATTGTCGTCAGAGTTG
TGGCGGTGGTGTTGGTGGGTGGTGGTGCTCGTGATTCCTGGTTCTTTGCC
GGGTTGGGGTCGAGGTCCTGAGGTCCGACGAGTTGGGGTTATGTCCAACT
GTTCTAGGAGGGATGGTTTGGGGGGACTGAATCGTGTCCGTGGGGTTGCT
GTCATGCTGCGTGGCAGTGTGACTTTCCTGTTGGGTAGAGCCTGTTTTGA
TAACCTGGCGTCGGATGTGGATTGCCGCAGAAGAGGAGGGGCAGCAGAAG
CAGCAGTCTTCGATGGTTCTGGGTATGCTTGTGGTTCTGGATTCTTATAA
AATCTCCTGCTGGCACTCCAGAAGCTCTGTAGTCGTTTGCTTAATGGTTC
CTCGGTGGAGGACCTGTATCTGCGGGCGTAGTTTGCGTCCTCAGTTGTAT
CAGATCGCTCATCGTCTCCAGCCATGGAAGTCAATTGACTTGCATCATCG
GCATCTTCTGAATCGAAACCAGCTGATTTCATAGCCTTGTCTCCGAAATT
CTCGTACCACTTGCCATCGTAAGCACGGCGTGGCAATCGAGACGGATGCA
GTGGCCTCTCATCCACTACTGGCGCTGCCTCTTGATATTGAGGAACCGTG
GCGGGTCGTAATTGGAATTGCAGCGGAGCATCCTCTGCGCCCATGACACT
TGTCGCAGCGATAGTCGACTCGTCGATGCCTTCTACATCGGTGTCAAACA
TCTCTCTATGCACGCCATTTTCCGCGGGCGCCTGAGGCATCTGCTCGCTA
AATGCCGGTGTTGAATAATGCTCCAGGGGAATTGATTTATTGATTGGCAG
AGGCACTGGCGCCACCAGATTCGTTGGAGGGACGTCAATCCTTGCTTGTG
CGGCTACAGCCTGCCGTGACTGGTTTGAGACTTCAGTTGTGCGTGGTCGA
GGCTGGCCAGCCTCTTTCGAATGCACATAATCGCCCACTCCCATGGTTAC
CCGAGTCTGAGCGGGGTGAGGAGAAGGAAGGGTAGTATTCAACAAACAAC
AAGTTGGAAAGGGGCTGACGGATATGCCAGAATGATGGTGAATGACTTGC
AAATTACAATTGTTATCTAGAACGGGTGGATCCGATCATGGTTGTGAGGT
TATTGAACGCTGGCGCTGTGAGGAGGTCGAAACTGGCAAACGCGTTGATT
CTTCAGGCACGCGCGAGGCATCCACACGAGGTCACGTGTGACTGATGGGC
back to topCoding sequence (CDS) from alignment at ch4:5566603..5571752+ >KJC3_006400-T1 ID=KJC3_006400-T1|Name=KJC3_006400-T1|organism=Aspergillus niger KJC3|type=CDS|length=4398bp|location=Sequence derived from alignment at ch4:5566603..5571752+ (Aspergillus niger KJC3)
ATGTCTGCCAATCCTGCCGACGATGGCGCTGCAAAGCCGCGCCTACACAC
GGCCCGCTCGTTCCCAAGGATGGACACTCCCGAGACCAGCCCTTTCGTTC
GTTCCAGAGCCAAGACTGTTCAGTCCGTGGCAATACCAGAGTCGGTAGAC
GCCGAAGCACTCCCGTTACCCTTGTCCACGTCCGAGGAGGACCGGAATAG
CAGCCCTGACCTGTTCGAGAAACCAGGCTCTGCCGACTTGGGGGACGATG
CGCAGCAGGGTGAGGAGACCTCGGTGCTCTCTCGAGGTAGCTTGGGTCAC
ACGGAAGAACTACCTATAGAGCTCGCAAGTATGACAGATAGATTTGTCCA
CTCTCTTACTGCCAAGGTACATTCCTCTCCTCCTACAATCGAGAAAGTAT
CGAGCCGGTTCCAAGAATTCTACGTCCGAGCAGAATCACACATAGCTACT
CACATCTCTGCTCTTGCTTCCCGGATAAATCGTGACCCTTCCCCGTACCG
TGCGGCGCAGGGCAAGTCTAGTAATACAGGTTCAGATGGCCGTCAAATGT
TGACAGCATCAGAAGTGACAGAAAGGAGGATTGCGCGAAAGCATCTTGCA
ACCAAGCGTGTTGCTTTGGAAGAAGCTGTGGAACGGAGAGCTTGCGAGAC
TATCTACGACAAGCTATGGAGGCATAAAAGCACACTGGATGAAATCAGGG
ACGAGAAATTGCGATCAAAGACCGCGGCTCTCTCTGTAGTTGGTATTAAT
CTGAAGGATCTCGGCGTCGAAATCGACCTAAGTGCTATTGATGAAGGGAA
ACAGAAAGAAGCAGATGAATGCCTTTCTGCTGCACGAGACTGCTTGGCAA
AGATGAACGATGACAAGTATCCTTTGGGCAAACTGCAGCAACTTGCCGCC
GCGCACAAGGCGATAGTTGATGCCTTGACTAAGCTCCTGCCATCTTCTTC
TTCCGCTGACGAGATACTGCCCACTCTGATCTATTCCTTGATCACTTGCC
CTCCTGAGGGGATCAACGTTATAAGCAATCTACAATTCATTCAACGGTTT
AGGTCGTCAAATAAGATAGACGGTGAAACCGCATATTGCTTGACTAACCT
GGAAGCGGCTATTAGCTTTCTTGAGAATGTAGATCTGTCCGAATTGCGCG
GCGAGGAAGCCTTTGAAGGCCAGACCAAGGCGTCCAATGATGATTCAACT
GCGGCCGGCAAGATCGACTCTCTCCCATCTCCTACTACCATCAAGGAAGC
AGCAGTATCGTCGGTTACACCGGTGACAGCCTCACCTGAACTCTCGAAGC
CAGCTGGTCAAGAAGCTTCGGATAGCTTGCTCAGGCCTCAGTCATCGGCG
AGCACTCAACAACGGCGGCTGAACAATCTCTTTCAGCCCCCTGCTAAAGT
GCTCGGCGCTGCTAATGATGCTGTTCGTAACACTGCCGACCAGGGCCTCA
AGAACATTGGGGCATCCCTAGACAGCAGCTTCAACTTTCTGTTTGGCCGC
CTCAAAGAGTTGCAGTCCAACCAGTTCCCTGTCAAAGATGGGAATCCGGT
CCTGCCGAAGACGTTGGCAGATGCTCGACGTCTGGTCACCAACCCTATAT
CTACGGAGCATAGCCTGAACCAGGACGAAAATGCAGGAAGAGAGTCTCGT
CCCATTGATCGCCCACAATTAAGGCGCATCGGATCGAAGGCAGAGGATAC
ATTCCTAGGGCTGGTCAGCGGCCAAAGAACTCCACGTGACCGGAGTGTCG
AGAGTGTACGGACTCAGGGCAGCTCCAGGAAAACAACAGTCTCCCAAGGC
CCGCAGAAGGAAGAGCCCCAGGCTTCCCCAGCAAGCGCGTCCTCCCAGAC
GCCTACACCGCTTGAATCGGTGCGGAACTTTGGAAACACCCTCAACCCAC
TAAACCACATCCCCGGTATGATCCGCAACTTTGGACGTGGTGCCCCTGGA
ACTCCTGACACTCCCGGTCCGATGCCATCATCCAACACTCCCACCGAGAG
AATCAGGGCCTCGATCCTCTCCCGCGAGACATCCTCATCAAGCGTCCCCA
GCGCTCCACCCCGGGTAGAGCGGGTCGACCCGCCTATTCAGCGTTTCCTC
CAGTTGCAGAACGCCAATGAGCTCACCATCGCCGACGTATCTGTTTTGTT
GGACGACTACAAGCGCCTTGCAGCAGCGCTATCGAAACAGAATCCCTGAA
TGTCTGCCAATCCTGCCGACGATGGCGCTGCAAAGCCGCGCCTACACACG
GCCCGCTCGTTCCCAAGGATGGACACTCCCGAGACCAGCCCTTTCGTTCG
TTCCAGAGCCAAGACTGTTCAGTCCGTGGCAATACCAGAGTCGGTAGACG
CCGAAGCACTCCCGTTACCCTTGTCCACGTCCGAGGAGGACCGGAATAGC
AGCCCTGACCTGTTCGAGAAACCAGGCTCTGCCGACTTGGGGGACGATGC
GCAGCAGGGTGAGGAGACCTCGGTGCTCTCTCGAGGTAGCTTGGGTCACA
CGGAAGAACTACCTATAGAGCTCGCAAGTATGACAGATAGATTTGTCCAC
TCTCTTACTGCCAAGGTACATTCCTCTCCTCCTACAATCGAGAAAGTATC
GAGCCGGTTCCAAGAATTCTACGTCCGAGCAGAATCACACATAGCTACTC
ACATCTCTGCTCTTGCTTCCCGGATAAATCGTGACCCTTCCCCGTACCGT
GCGGCGCAGGGCAAGTCTAGTAATACAGGTTCAGATGGCCGTCAAATGTT
GACAGCATCAGAAGTGACAGAAAGGAGGATTGCGCGAAAGCATCTTGCAA
CCAAGCGTGTTGCTTTGGAAGAAGCTGTGGAACGGAGAGCTTGCGAGACT
ATCTACGACAAGCTATGGAGGCATAAAAGCACACTGGATGAAATCAGGGA
CGAGAAATTGCGATCAAAGACCGCGGCTCTCTCTGTAGTTGGTATTAATC
TGAAGGATCTCGGCGTCGAAATCGACCTAAGTGCTATTGATGAAGGGAAA
CAGAAAGAAGCAGATGAATGCCTTTCTGCTGCACGAGACTGCTTGGCAAA
GATGAACGATGACAAGTATCCTTTGGGCAAACTGCAGCAACTTGCCGCCG
CGCACAAGGCGATAGTTGATGCCTTGACTAAGCTCCTGCCATCTTCTTCT
TCCGCTGACGAGATACTGCCCACTCTGATCTATTCCTTGATCACTTGCCC
TCCTGAGGGGATCAACGTTATAAGCAATCTACAATTCATTCAACGGTTTA
GGTCGTCAAATAAGATAGACGGTGAAACCGCATATTGCTTGACTAACCTG
GAAGCGGCTATTAGCTTTCTTGAGAATGTAGATCTGTCCGAATTGCGCGG
CGAGGAAGCCTTTGAAGGCCAGACCAAGGCGTCCAATGATGATTCAACTG
CGGCCGGCAAGATCGACTCTCTCCCATCTCCTACTACCATCAAGGAAGCA
GCAGTATCGTCGGTTACACCGGTGACAGCCTCACCTGAACTCTCGAAGCC
AGCTGGTCAAGAAGCTTCGGATAGCTTGCTCAGGCCTCAGTCATCGGCGA
GCACTCAACAACGGCGGCTGAACAATCTCTTTCAGCCCCCTGCTAAAGTG
CTCGGCGCTGCTAATGATGCTGTTCGTAACACTGCCGACCAGGGCCTCAA
GAACATTGGGGCATCCCTAGACAGCAGCTTCAACTTTCTGTTTGGCCGCC
TCAAAGAGTTGCAGTCCAACCAGTTCCCTGTCAAAGATGGGAATCCGGTC
CTGCCGAAGACGTTGGCAGATGCTCGACGTCTGGTCACCAACCCTATATC
TACGGAGCATAGCCTGAACCAGGACGAAAATGCAGGAAGAGAGTCTCGTC
CCATTGATCGCCCACAATTAAGGCGCATCGGATCGAAGGCAGAGGATACA
TTCCTAGGGCTGGTCAGCGGCCAAAGAACTCCACGTGACCGGAGTGTCGA
GAGTGTACGGACTCAGGGCAGCTCCAGGAAAACAACAGTCTCCCAAGGCC
CGCAGAAGGAAGAGCCCCAGGCTTCCCCAGCAAGCGCGTCCTCCCAGACG
CCTACACCGCTTGAATCGGTGCGGAACTTTGGAAACACCCTCAACCCACT
AAACCACATCCCCGGTATGATCCGCAACTTTGGACGTGGTGCCCCTGGAA
CTCCTGACACTCCCGGTCCGATGCCATCATCCAACACTCCCACCGAGAGA
ATCAGGGCCTCGATCCTCTCCCGCGAGACATCCTCATCAAGCGTCCCCAG
CGCTCCACCCCGGGTAGAGCGGGTCGACCCGCCTATTCAGCGTTTCCTCC
AGTTGCAGAACGCCAATGAGCTCACCATCGCCGACGTATCTGTTTTGTTG
GACGACTACAAGCGCCTTGCAGCAGCGCTATCGAAACAGAATCCCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006400-T1.utr5p1 | KJC3_006400-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037191 |
| DBxref | InterPro:IPR003123 |
| DBxref | PFAM:PF02204 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5566603..5571752 + |
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