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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5599013..5602016- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006413-T1 ID=KJC3_006413-T1|Name=KJC3_006413-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3004bp|location=Sequence derived from alignment at ch4:5599013..5602016- (Aspergillus niger KJC3)
CTGGATTTGGTGCTTTGCTTCTCTATCGCATCCTTCTTTATTTCTGCTTG
GCTGCAGTAGAGGTGGTGGTTTGGCTCTATTATCTTCTATATTTTTCTAC
ATTCATCTGCATTTTATATTTTCTTGGTTGGCTGTTTCGTCTGCGCCGTT
GCCTCTCTCCCTCCAGAATTCTCTTCGCCGACTTCCGAGTTTCCTACGGT
CTACGCGCCTTACGCTCCCACGATACCTAGTGGCAATCGGGTTGGGATAT
ACCTCTTGCCTTTCCTATCTCTTCTATAAAGGAAGTTGGATCTTACACTA
CGAATCGAACAGCGTGTCCTTCGTTCCCCGCCTTAGATGCTTCGTTGCGG
CAATGCCACCGCTCTCCGGTCCGGAAGCGTGGCAATGAGACCACTTCTCC
GCACACAGTGGCTCCGGACTACCCCGAGTCGATCTTTCTTTCACATTGCG
GAATCTGGACCTCGTATAGGAACATCATGGAGACACTCGGCGCGGATTGG
GACTCTGCACGCAAGGCAAATGCACGAGGCTGTGGCCGCGGAGGGCCCAC
CCGATATTACCTTCAAGGAGGAGAGTGCGCCTCGTGAGAAGGAGGAGGAA
GAAAGGGAGAGTGAGCCTGCAGACTCTGATGGAAAACAAAAGTCTCCTCA
GTCTGGTTCCGCCACAGAAGAAGTGCTTGATAAACGGACGCTACTGCGTC
GGCTTGTTCGGAGGGAATGGGTGCCGCAGACGTACTTCGTTCCTCTCTCT
GTGGTGAATGCGGAGTTGAAATGGCTGCGTGACCCATTGGCGCTGGCCGA
GCGCGTCCGGCGTTGTCTGGCAGATGGGCACCTGGCGCTTGGTGTGTCGC
TTGTTTATAAGGCCCAGAGCAAAGGGTTCAGGTGCACTGCGGCTTTTAAT
CGGCTGTTGGAGTATCTATTGCGGGAGAAGGAGCCGGAGCTTGCGTTCAG
AGCTTGGAATGATGTATGTTCCTTTTCACCCTTCTATTCTTCGTTATTGT
TGTTTCTGGATTATCGATCCCTGGCTGACCAAATGCTCATTTGAAATGTA
ACAGATGAAAAAGCGAGGTATCGAACTTAACTCGAGATCTTACACTGTTT
TCCTGAACGGTCTCTGCCAGGACTTCGACATTAAGGGCTTCAAGCCGGTG
AAATTGGCCTCGAAAATCTACATGTCGCTCTACGCTGAGACTTCCGTCGT
CGAACCCCATATCATCCACGCCAATGCAATGCTTAAGGTCTGCTGGTGGC
ACCGAGATATGGAAGTTCTATGGGAGGTTGCTGGTGCACTGCCGGAGTCC
GGCAAGCTAGCCCCGGACCTATTGACCTACACCACGCTGTTAGGGGCTAT
CGCAGGTAGTACGAGGGCCGAAACGTCGGAGTTGTATAAGGGAAATATCA
AGACGGCGGAAAGAAAACAAGTTGAAGTTGAGCCGCTTCTGCAAAGGAGA
GCTCAGGGAATACAGGAAGCCAAACGGGTCTGGGCCGACATTGTTTATCA
ATGGAAGAAGGGCCGGGTGCCCATGGACAATTATCTGGCTCACGCCATGG
CCCACATGTTGCAGGAGAACTCGAGCTGTGACCACGATGTGTGGTGCGTG
TTTGCTTTGTATAATCAAACCGCTGGTATTCCAATCTTCGCCGAAGAGCC
CCCGAAGCAAAGGATAGAGCCAACTTCGGAGAAATCGCGGGTGCTTTCCC
CGCACAAGGATGCGGACTTGGAAGATGATATCCCATTTGTCGACGAGGGA
GACAGATTACCCGATATCGAACCCGAGGATATGAAGGATGTGGAGGCCGA
AGAGGATTTCGATCATCTTTTCGACCCTGTTGTTGACACGGTGAAACCGC
CTGCGAAGACAAGGCTCTCTGTGAAAGATGAAGCGGCCCTCCCCTCGTAT
ATTGAGGTGGGAAACAGGGAGCTCACTATGCTTCTCAAAGCCTGCCTGTC
GATAACACAAGGAACAGCCGCTGCAAAGGAATACTGGCGGTACCTTACGA
AAGGAGATGACTCGCATAAGGTCGTACCTGACGCGGTTAGCTATCACGCA
TACCTACGCATTCTACGTGCTGCGCGGGCTAGTCGTGAAACCGTGGAAGT
GGTACGCGATATGACTCGGGACCCCAACGGACCTACCGAAGGAAAGACCT
TCCGCATATCCATGGCCTCATGTACTCGGGACCGCAGAAACCCCAATGTG
TTCAGACACGCCAACGAGCTTCTGGATCTCATGGCCAACGGCATCGTGCT
TCCCGATGCTCGATCCATAACTCAATATCTCGACTTGGTCCATTCGCTGG
AGGATAGTCCAGATCTACTGATGTCCCTCGCTGGCCTTGAGTCGGGAGCA
GACGCCAAATCAAACAATCTCAGCGCCCTAGGCGTGAAACTGAAGGCCAG
CCTAATCACATCCGCCGCAGAACGGCTCTGTACCCTGATTCGGGACCTCG
ATGAAGCCGTGTCCAGTGAACTATTGGGGCAGAAGTCTCGACAATCCTAC
CTGGCCCGGGTGGCCAAGACCAATCCGGCGGCTGTGATTAGAGGAGAAGA
TGCCCTCAAGGCACTTACTATGACACGAAGATTATTTGACTCGGTCAAAG
AATTCAAGCAACATGTTCCCCAGGAGACCTTCAAAGAGGTCCAGCGCCAC
GCCGAGCTTCTGAAGAAATACTCCGACAAGAGCATTATCACGAAGTTCCG
GAAAACCTTGGTCGGAGCGACCGAGGAGCAAATGAACAGATTCGCAGAGC
GAGAATAACCCAGCCCATGAGTTCCTACTTATTGATCCAGTCCAGTCCTA
TCAGCCGAGGGCCATTCGGATCCTTTTGCTTCATCCAAGTGGATCTATCT
AACGCCATGTTGCGTGGTCTCCACTCTTATTCAGTACAAAGTATAGCATA
ATCGGGCGTTATAGAAAAGTCGATGTATCATAGCACATTTTGAAGGGGAG
GACTATATGTATAATACTCTTGGAACATGAACATAGTACTCATCATCTTT
TGGG back to topCoding sequence (CDS) from alignment at ch4:5599013..5602016- >KJC3_006413-T1 ID=KJC3_006413-T1|Name=KJC3_006413-T1|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch4:5599013..5602016- (Aspergillus niger KJC3)
ATGAAAAAGCGAGGTATCGAACTTAACTCGAGATCTTACACTGTTTTCCT
GAACGGTCTCTGCCAGGACTTCGACATTAAGGGCTTCAAGCCGGTGAAAT
TGGCCTCGAAAATCTACATGTCGCTCTACGCTGAGACTTCCGTCGTCGAA
CCCCATATCATCCACGCCAATGCAATGCTTAAGGTCTGCTGGTGGCACCG
AGATATGGAAGTTCTATGGGAGGTTGCTGGTGCACTGCCGGAGTCCGGCA
AGCTAGCCCCGGACCTATTGACCTACACCACGCTGTTAGGGGCTATCGCA
GGTAGTACGAGGGCCGAAACGTCGGAGTTGTATAAGGGAAATATCAAGAC
GGCGGAAAGAAAACAAGTTGAAGTTGAGCCGCTTCTGCAAAGGAGAGCTC
AGGGAATACAGGAAGCCAAACGGGTCTGGGCCGACATTGTTTATCAATGG
AAGAAGGGCCGGGTGCCCATGGACAATTATCTGGCTCACGCCATGGCCCA
CATGTTGCAGGAGAACTCGAGCTGTGACCACGATGTGTGGTGCGTGTTTG
CTTTGTATAATCAAACCGCTGGTATTCCAATCTTCGCCGAAGAGCCCCCG
AAGCAAAGGATAGAGCCAACTTCGGAGAAATCGCGGGTGCTTTCCCCGCA
CAAGGATGCGGACTTGGAAGATGATATCCCATTTGTCGACGAGGGAGACA
GATTACCCGATATCGAACCCGAGGATATGAAGGATGTGGAGGCCGAAGAG
GATTTCGATCATCTTTTCGACCCTGTTGTTGACACGGTGAAACCGCCTGC
GAAGACAAGGCTCTCTGTGAAAGATGAAGCGGCCCTCCCCTCGTATATTG
AGGTGGGAAACAGGGAGCTCACTATGCTTCTCAAAGCCTGCCTGTCGATA
ACACAAGGAACAGCCGCTGCAAAGGAATACTGGCGGTACCTTACGAAAGG
AGATGACTCGCATAAGGTCGTACCTGACGCGGTTAGCTATCACGCATACC
TACGCATTCTACGTGCTGCGCGGGCTAGTCGTGAAACCGTGGAAGTGGTA
CGCGATATGACTCGGGACCCCAACGGACCTACCGAAGGAAAGACCTTCCG
CATATCCATGGCCTCATGTACTCGGGACCGCAGAAACCCCAATGTGTTCA
GACACGCCAACGAGCTTCTGGATCTCATGGCCAACGGCATCGTGCTTCCC
GATGCTCGATCCATAACTCAATATCTCGACTTGGTCCATTCGCTGGAGGA
TAGTCCAGATCTACTGATGTCCCTCGCTGGCCTTGAGTCGGGAGCAGACG
CCAAATCAAACAATCTCAGCGCCCTAGGCGTGAAACTGAAGGCCAGCCTA
ATCACATCCGCCGCAGAACGGCTCTGTACCCTGATTCGGGACCTCGATGA
AGCCGTGTCCAGTGAACTATTGGGGCAGAAGTCTCGACAATCCTACCTGG
CCCGGGTGGCCAAGACCAATCCGGCGGCTGTGATTAGAGGAGAAGATGCC
CTCAAGGCACTTACTATGACACGAAGATTATTTGACTCGGTCAAAGAATT
CAAGCAACATGTTCCCCAGGAGACCTTCAAAGAGGTCCAGCGCCACGCCG
AGCTTCTGAAGAAATACTCCGACAAGAGCATTATCACGAAGTTCCGGAAA
ACCTTGGTCGGAGCGACCGAGGAGCAAATGAACAGATTCGCAGAGCGAGA
ATAAATGCTTCGTTGCGGCAATGCCACCGCTCTCCGGTCCGGAAGCGTGG
CAATGAGACCACTTCTCCGCACACAGTGGCTCCGGACTACCCCGAGTCGA
TCTTTCTTTCACATTGCGGAATCTGGACCTCGTATAGGAACATCATGGAG
ACACTCGGCGCGGATTGGGACTCTGCACGCAAGGCAAATGCACGAGGCTG
TGGCCGCGGAGGGCCCACCCGATATTACCTTCAAGGAGGAGAGTGCGCCT
CGTGAGAAGGAGGAGGAAGAAAGGGAGAGTGAGCCTGCAGACTCTGATGG
AAAACAAAAGTCTCCTCAGTCTGGTTCCGCCACAGAAGAAGTGCTTGATA
AACGGACGCTACTGCGTCGGCTTGTTCGGAGGGAATGGGTGCCGCAGACG
TACTTCGTTCCTCTCTCTGTGGTGAATGCGGAGTTGAAATGGCTGCGTGA
CCCATTGGCGCTGGCCGAGCGCGTCCGGCGTTGTCTGGCAGATGGGCACC
TGGCGCTTGGTGTGTCGCTTGTTTATAAGGCCCAGAGCAAAGGGTTCAGG
TGCACTGCGGCTTTTAATCGGCTGTTGGAGTATCTATTGCGGGAGAAGGA
GCCGGAGCTTGCGTTCAGAGCTTGGAATGATATGAAAAAGCGAGGTATCG
AACTTAACTCGAGATCTTACACTGTTTTCCTGAACGGTCTCTGCCAGGAC
TTCGACATTAAGGGCTTCAAGCCGGTGAAATTGGCCTCGAAAATCTACAT
GTCGCTCTACGCTGAGACTTCCGTCGTCGAACCCCATATCATCCACGCCA
ATGCAATGCTTAAGGTCTGCTGGTGGCACCGAGATATGGAAGTTCTATGG
GAGGTTGCTGGTGCACTGCCGGAGTCCGGCAAGCTAGCCCCGGACCTATT
GACCTACACCACGCTGTTAGGGGCTATCGCAGGTAGTACGAGGGCCGAAA
CGTCGGAGTTGTATAAGGGAAATATCAAGACGGCGGAAAGAAAACAAGTT
GAAGTTGAGCCGCTTCTGCAAAGGAGAGCTCAGGGAATACAGGAAGCCAA
ACGGGTCTGGGCCGACATTGTTTATCAATGGAAGAAGGGCCGGGTGCCCA
TGGACAATTATCTGGCTCACGCCATGGCCCACATGTTGCAGGAGAACTCG
AGCTGTGACCACGATGTGTGGTGCGTGTTTGCTTTGTATAATCAAACCGC
TGGTATTCCAATCTTCGCCGAAGAGCCCCCGAAGCAAAGGATAGAGCCAA
CTTCGGAGAAATCGCGGGTGCTTTCCCCGCACAAGGATGCGGACTTGGAA
GATGATATCCCATTTGTCGACGAGGGAGACAGATTACCCGATATCGAACC
CGAGGATATGAAGGATGTGGAGGCCGAAGAGGATTTCGATCATCTTTTCG
ACCCTGTTGTTGACACGGTGAAACCGCCTGCGAAGACAAGGCTCTCTGTG
AAAGATGAAGCGGCCCTCCCCTCGTATATTGAGGTGGGAAACAGGGAGCT
CACTATGCTTCTCAAAGCCTGCCTGTCGATAACACAAGGAACAGCCGCTG
CAAAGGAATACTGGCGGTACCTTACGAAAGGAGATGACTCGCATAAGGTC
GTACCTGACGCGGTTAGCTATCACGCATACCTACGCATTCTACGTGCTGC
GCGGGCTAGTCGTGAAACCGTGGAAGTGGTACGCGATATGACTCGGGACC
CCAACGGACCTACCGAAGGAAAGACCTTCCGCATATCCATGGCCTCATGT
ACTCGGGACCGCAGAAACCCCAATGTGTTCAGACACGCCAACGAGCTTCT
GGATCTCATGGCCAACGGCATCGTGCTTCCCGATGCTCGATCCATAACTC
AATATCTCGACTTGGTCCATTCGCTGGAGGATAGTCCAGATCTACTGATG
TCCCTCGCTGGCCTTGAGTCGGGAGCAGACGCCAAATCAAACAATCTCAG
CGCCCTAGGCGTGAAACTGAAGGCCAGCCTAATCACATCCGCCGCAGAAC
GGCTCTGTACCCTGATTCGGGACCTCGATGAAGCCGTGTCCAGTGAACTA
TTGGGGCAGAAGTCTCGACAATCCTACCTGGCCCGGGTGGCCAAGACCAA
TCCGGCGGCTGTGATTAGAGGAGAAGATGCCCTCAAGGCACTTACTATGA
CACGAAGATTATTTGACTCGGTCAAAGAATTCAAGCAACATGTTCCCCAG
GAGACCTTCAAAGAGGTCCAGCGCCACGCCGAGCTTCTGAAGAAATACTC
CGACAAGAGCATTATCACGAAGTTCCGGAAAACCTTGGTCGGAGCGACCG
AGGAGCAAATGAACAGATTCGCAGAGCGAGAATAAATGCTTCGTTGCGGC
AATGCCACCGCTCTCCGGTCCGGAAGCGTGGCAATGAGACCACTTCTCCG
CACACAGTGGCTCCGGACTACCCCGAGTCGATCTTTCTTTCACATTGCGG
AATCTGGACCTCGTATAGGAACATCATGGAGACACTCGGCGCGGATTGGG
ACTCTGCACGCAAGGCAAATGCACGAGGCTGTGGCCGCGGAGGGCCCACC
CGATATTACCTTCAAGGAGGAGAGTGCGCCTCGTGAGAAGGAGGAGGAAG
AAAGGGAGAGTGAGCCTGCAGACTCTGATGGAAAACAAAAGTCTCCTCAG
TCTGGTTCCGCCACAGAAGAAGTGCTTGATAAACGGACGCTACTGCGTCG
GCTTGTTCGGAGGGAATGGGTGCCGCAGACGTACTTCGTTCCTCTCTCTG
TGGTGAATGCGGAGTTGAAATGGCTGCGTGACCCATTGGCGCTGGCCGAG
CGCGTCCGGCGTTGTCTGGCAGATGGGCACCTGGCGCTTGGTGTGTCGCT
TGTTTATAAGGCCCAGAGCAAAGGGTTCAGGTGCACTGCGGCTTTTAATC
GGCTGTTGGAGTATCTATTGCGGGAGAAGGAGCCGGAGCTTGCGTTCAGA
GCTTGGAATGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006413-T1.utr3p1 | KJC3_006413-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006413-T1.utr5p1 | KJC3_006413-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR002885 |
| DBxref | PFAM:PF13041 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5599013..5602016 - |
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