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KJC3_006431-T1, KJC3_006431-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006431-T1
Unique NameKJC3_006431-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5684735..5686208+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006431-T1 ID=KJC3_006431-T1|Name=KJC3_006431-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1474bp|location=Sequence derived from alignment at ch4:5684735..5686208+ (Aspergillus niger KJC3)
TATAGGGCGAGCCAAGGTTAATCTCACACGCGGCATATTAGCCTGGTAGG
AAACCTTGAACGTTCGAAATGCCCCTGTTTCGGACAATAGGCGCCAGGAT
ATCAACTGCTTAGTATTCGCCTACTTGTCGCCACCCACTCGGAATGCCAC
AGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAAGCGGCGC
CATGTCAAGGTATTAGCTTACGCTCCGGTTATCCCTACGAACCGACTAAC
CTCTCCAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCCATAGCGCC
GAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAGCAGCTCC
ACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATACCTCTCG
GGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGCGCCCTTC
CGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCACAATTTGTA
CACCAAGATCCGCACCAGCTTCGACCCCAACAGATCTATATCATGGCTAG
CAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACGAGCTGCTC
GCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGCCGCGAATA
CTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTCCATTTTCC
AAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATCTCTTCGTC
TTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTCGTCTACCG
CGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTCCACTTCT
TCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTCGCATATG
ATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAGATCTGTA
TAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGATGGATCTGA
TCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATATATAGGGAGGCT
GTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAATCTGGACGA
GCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCTGATGAAGA
TTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCACTGATTATT
TTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTTTGGATGTT
TGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATGCTTGGGGG
AGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAGATGATCTT
AACTAGTACCACTAATAGTAGTATATACATGCTCGCACTAGGGGATGATC
AGAGGATGACCAGGAAGAGTTCGATCATACTAGATTCAACTAGTACTACT
ATAGTACTACTACGCCAATCACGC
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Coding sequence (CDS) from alignment at ch4:5684735..5686208+

>KJC3_006431-T1 ID=KJC3_006431-T1|Name=KJC3_006431-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch4:5684735..5686208+ (Aspergillus niger KJC3)
ATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAA
GCGGCGCCATGTCAAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCC
ATAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCA
GCAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTAT
ACCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGG
CGCCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCAC
AATTTGTACACCAAGATCCGCACCAGCTTCGACCCCAACAGATCTATATC
ATGGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACG
AGCTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGC
CGCGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTC
CATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGAGAATTGCGTCCATC
TCTTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTC
GTCTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGT
CCACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCT
CGCATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATA
GATCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGAT
GGATCTGATCTATAGCGCCAAGCTCGGGAACGAACTCACGGGAATATATA
GGGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATGTTATAGAAGAGAAT
CTGGACGAGCTGCATGTGGGAATTAATGCGGTAACTACGTGGCCTATCCT
GATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAGACGGCCTGAGGCAC
TGATTATTTTGGCTCATTATGCGTGTTTGTTGCATCGATTTCGGGAATTT
TGGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTGGAGGTTATGGGATG
CTTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCCGAAGGAGGTTCTAG
ATGATCTTAACTAGATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGA
TGTCTCGAGTGTAAGCGGCGCCATGTCAAGTGCGATGAGAGACATCCCAT
TTGCTCGAATTGCCATAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCT
CTTTGCTGAGAGCAGCAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCA
GCTTCACCGCCTATACCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAA
TGAACCCTCACAGGCGCCCTTCCGCAGCCAGGCCGTGAACATACTCCATA
TCGAGCTCTTCCACAATTTGTACACCAAGATCCGCACCAGCTTCGACCCC
AACAGATCTATATCATGGCTAGCAGATGGTGTGGACCCTACTACAGCCCC
ATATCTAGTCAACGAGCTGCTCGCATTTAGTGCCCTACACCTAAGTACGG
CACGACCAGATCGCCGCGAATACTACCGCTACCACGCAGCCCAGCTACAA
ACCGACGCGTTGTCCATTTTCCAAGCGTCCTCCCCGCAAGTAACACGAGA
GAATTGCGTCCATCTCTTCGTCTTCGCAGCTACTCTGGGTATCCACATGC
TCTGCGACACACTCGTCTACCGCGAAGGAGGCGGCGACTTTGATACCTTC
CTCGACCGCTTCGTCCACTTCTTCCGTGTTTATCATGGTGTCCGTACCAT
TGTTAGCAAAGCCTCGCATATGATTCAGGATACGCCGCTCGGTTTAAGTT
TCAACGTGGGCATAGATCTGTATAAATTTAATGGATGTCTTGGGCCCGGC
TGTCAGCGCCTGATGGATCTGATCTATAGCGCCAAGCTCGGGAACGAACT
CACGGGAATATATAGGGAGGCTGTAGAATCGTTACAGTCGTGTTTGAATG
TTATAGAAGAGAATCTGGACGAGCTGCATGTGGGAATTAATGCGGTAACT
ACGTGGCCTATCCTGATGAAGATTGAGTTCGCGGAGTCTTTGGAGCAGAG
ACGGCCTGAGGCACTGATTATTTTGGCTCATTATGCGTGTTTGTTGCATC
GATTTCGGGAATTTTGGATGTTTGGGGATTCGGGGCAGTTTGTTATCCTG
GAGGTTATGGGATGCTTGGGGGAGGAGTGGGAGGAGTGGTTGGCGTGGCC
GAAGGAGGTTCTAGATGATCTTAACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006431KJC3_006431Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006431-T1.utr5p1KJC3_006431-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006431-T1.exon1KJC3_006431-T1.exon1Aspergillus niger KJC3exon
KJC3_006431-T1.exon2KJC3_006431-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006431-T1.cdsKJC3_006431-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006431-T1.utr3p1KJC3_006431-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006431-T1KJC3_006431-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5684735..5686208 +
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