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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5750839..5752400+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006452-T1 ID=KJC3_006452-T1|Name=KJC3_006452-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1562bp|location=Sequence derived from alignment at ch4:5750839..5752400+ (Aspergillus niger KJC3)
CTCGATCTTTCCCTTTCTCTCTCTTTACATCCATCTACTCTATACATCCA
ACTCTTCAACAACAACACCACCATCATGACCACCCCAATTCCCTACGGCG
CTCCCATGCGCCAACACTTCTGCCTCGACCCCAACTGGAAGAACCTCAAC
CACGGCAAGCCCCTCCCCCGTTCCCATTCCCATCTCCTCAAACGTTTCAA
GCCTCCTAATAATGATACCCCAGGATCCTTCGGCACCTACCCCCTCCGGG
TCCAAACCGCCCTCCGCGCCCACCAAAGCACCGCAGAATCGCACCCGGAC
CTCTTCATCCGGCGCCTCTGCCCCTCTCAAACCCAACACTCCCTCAAGTT
ACTCTCCACCCTCCTGCACGCGCCAGAATCCTCTCTCGCGTTCGTCAAAA
ACGCCACCACGGGCGTTAACACCGTCCTGCACAACATCCCCTTCACATCC
AACGATGTGATCATCTACTTCGACACCATCTACGGAGCAATCGAGTACGG
GCTTCTTGCCCTGCAGGAACGGACCGGCGTGAAACTTCGGAAGGTGGAGT
ATACGCTTCCGATATCTCATGGGGAGATAGTGAAGAGGTTTAGGGATGTA
GTGGAGAAGGTGAGGGAAGAGGAAGGGGGAGGGTTGAACGTTAAGGCAGC
GGTGTTTGATATGGTGGTTAGTGTTCCTGCGATCCGGTTCCCGTTTGAGG
CGTTGGTGAGGGAATGTAAGGAGTTGGGGGTGTTGAGTGTGGTTGATGGT
GCGCATGGGGTGGGTATGTTGGATTTGGATTTGGAAGCCTTGGGAGTGGA
TTTCTTGACGAGTAATTTGCATAAGTATGCCCCCCTTCCCCCCCCCCTTT
TTCCTTCTTTTGTCTCATTCCATTTGGGTGTATATGTATGTGTGTGTGTG
GTATTGATATGTGGTGTTGTTGCAGGTGGCTCTACATCCCCCGCGGCTGC
GCCGTGCTCTACGTCGCGCCTCAACATCAACATCTCATGCGCACGACGTC
GCCCACTTCCTGGGGATATATATCCTCCGCTGCGGCGGAGGAAGCCCGTA
CAAATGGCACCACTGCGTCTGCGTTCAGGAATCTGTTTCAGTCGACGGCT
ACGAATGACGACACGCCGTATTTGTGTGTGCCTGAGGCGTTGAAGTTCCG
GGAGGAGGTGTGTGGTGGGGAGAAGGCTATTTATGAGTATTTGGAGAGGT
TGGCGAATGAGGCGGCGGATGTGGTGGCGGGGGTGTTGGGGACGGAGGTG
TTGAGGGATGAGGAGGGGTTGTTGACCAGGTGTGCGATGACGAATGTGAG
GTTGCCGTTGAAGGTTGGTGATGGTGGTGATGGTGATGGGTATACGGTGG
TGGAGAAGGAGGTGGTGGGGAAGGTGACGGAGTGGTTTCGTAATGTTCTC
ATGGATGAGTATAAGACGTTTGTGCCGGTGTTTGAGTACAAGGGGTGGTT
GTGGATGAGGTTGTCGGCACAGGTGTATTTGGATAAGAGTGATTTTGAGT
GGTTGGGAGGTGTGTTGAAGGAGTGTTGTGAGAGAGTGGGGAGGGAGGTT
CTTCAAAAGTAG back to topCoding sequence (CDS) from alignment at ch4:5750839..5752400+ >KJC3_006452-T1 ID=KJC3_006452-T1|Name=KJC3_006452-T1|organism=Aspergillus niger KJC3|type=CDS|length=3951bp|location=Sequence derived from alignment at ch4:5750839..5752400+ (Aspergillus niger KJC3)
ATGACCACCCCAATTCCCTACGGCGCTCCCATGCGCCAACACTTCTGCCT
CGACCCCAACTGGAAGAACCTCAACCACGGATCCTTCGGCACCTACCCCC
TCCGGGTCCAAACCGCCCTCCGCGCCCACCAAAGCACCGCAGAATCGCAC
CCGGACCTCTTCATCCGGCGCCTCTGCCCCTCTCAAACCCAACACTCCCT
CAAGTTACTCTCCACCCTCCTGCACGCGCCAGAATCCTCTCTCGCGTTCG
TCAAAAACGCCACCACGGGCGTTAACACCGTCCTGCACAACATCCCCTTC
ACATCCAACGATGTGATCATCTACTTCGACACCATCTACGGAGCAATCGA
GTACGGGCTTCTTGCCCTGCAGGAACGGACCGGCGTGAAACTTCGGAAGG
TGGAGTATACGCTTCCGATATCTCATGGGGAGATAGTGAAGAGGTTTAGG
GATGTAGTGGAGAAGGTGAGGGAAGAGGAAGGGGGAGGGTTGAACGTTAA
GGCAGCGGTGTTTGATATGGTGGTTAGTGTTCCTGCGATCCGGTTCCCGT
TTGAGGCGTTGGTGAGGGAATGTAAGGAGTTGGGGGTGTTGAGTGTGGTT
GATGGTGCGCATGGGGTGGGTATGTTGGATTTGGATTTGGAAGCCTTGGG
AGTGGATTTCTTGACGAGTAATTTGCATAAGTGGCTCTACATCCCCCGCG
GCTGCGCCGTGCTCTACGTCGCGCCTCAACATCAACATCTCATGCGCACG
ACGTCGCCCACTTCCTGGGGATATATATCCTCCGCTGCGGCGGAGGAAGC
CCGTACAAATGGCACCACTGCGTCTGCGTTCAGGAATCTGTTTCAGTCGA
CGGCTACGAATGACGACACGCCGTATTTGTGTGTGCCTGAGGCGTTGAAG
TTCCGGGAGGAGGTGTGTGGTGGGGAGAAGGCTATTTATGAGTATTTGGA
GAGGTTGGCGAATGAGGCGGCGGATGTGGTGGCGGGGGTGTTGGGGACGG
AGGTGTTGAGGGATGAGGAGGGGTTGTTGACCAGGTGTGCGATGACGAAT
GTGAGGTTGCCGTTGAAGGTTGGTGATGGTGGTGATGGTGATGGGTATAC
GGTGGTGGAGAAGGAGGTGGTGGGGAAGGTGACGGAGTGGTTTCGTAATG
TTCTCATGGATGAGTATAAGACGTTTGTGCCGGTGTTTGAGTACAAGGGG
TGGTTGTGGATGAGGTTGTCGGCACAGGTGTATTTGGATAAGAGTGATTT
TGAGTGGTTGGGAGGTGTGTTGAAGGAGTGTTGTGAGAGAGTGGGGAGGG
AGGTTCTTCAAAAGTAGATGACCACCCCAATTCCCTACGGCGCTCCCATG
CGCCAACACTTCTGCCTCGACCCCAACTGGAAGAACCTCAACCACGGATC
CTTCGGCACCTACCCCCTCCGGGTCCAAACCGCCCTCCGCGCCCACCAAA
GCACCGCAGAATCGCACCCGGACCTCTTCATCCGGCGCCTCTGCCCCTCT
CAAACCCAACACTCCCTCAAGTTACTCTCCACCCTCCTGCACGCGCCAGA
ATCCTCTCTCGCGTTCGTCAAAAACGCCACCACGGGCGTTAACACCGTCC
TGCACAACATCCCCTTCACATCCAACGATGTGATCATCTACTTCGACACC
ATCTACGGAGCAATCGAGTACGGGCTTCTTGCCCTGCAGGAACGGACCGG
CGTGAAACTTCGGAAGGTGGAGTATACGCTTCCGATATCTCATGGGGAGA
TAGTGAAGAGGTTTAGGGATGTAGTGGAGAAGGTGAGGGAAGAGGAAGGG
GGAGGGTTGAACGTTAAGGCAGCGGTGTTTGATATGGTGGTTAGTGTTCC
TGCGATCCGGTTCCCGTTTGAGGCGTTGGTGAGGGAATGTAAGGAGTTGG
GGGTGTTGAGTGTGGTTGATGGTGCGCATGGGGTGGGTATGTTGGATTTG
GATTTGGAAGCCTTGGGAGTGGATTTCTTGACGAGTAATTTGCATAAGTG
GCTCTACATCCCCCGCGGCTGCGCCGTGCTCTACGTCGCGCCTCAACATC
AACATCTCATGCGCACGACGTCGCCCACTTCCTGGGGATATATATCCTCC
GCTGCGGCGGAGGAAGCCCGTACAAATGGCACCACTGCGTCTGCGTTCAG
GAATCTGTTTCAGTCGACGGCTACGAATGACGACACGCCGTATTTGTGTG
TGCCTGAGGCGTTGAAGTTCCGGGAGGAGGTGTGTGGTGGGGAGAAGGCT
ATTTATGAGTATTTGGAGAGGTTGGCGAATGAGGCGGCGGATGTGGTGGC
GGGGGTGTTGGGGACGGAGGTGTTGAGGGATGAGGAGGGGTTGTTGACCA
GGTGTGCGATGACGAATGTGAGGTTGCCGTTGAAGGTTGGTGATGGTGGT
GATGGTGATGGGTATACGGTGGTGGAGAAGGAGGTGGTGGGGAAGGTGAC
GGAGTGGTTTCGTAATGTTCTCATGGATGAGTATAAGACGTTTGTGCCGG
TGTTTGAGTACAAGGGGTGGTTGTGGATGAGGTTGTCGGCACAGGTGTAT
TTGGATAAGAGTGATTTTGAGTGGTTGGGAGGTGTGTTGAAGGAGTGTTG
TGAGAGAGTGGGGAGGGAGGTTCTTCAAAAGTAGATGACCACCCCAATTC
CCTACGGCGCTCCCATGCGCCAACACTTCTGCCTCGACCCCAACTGGAAG
AACCTCAACCACGGATCCTTCGGCACCTACCCCCTCCGGGTCCAAACCGC
CCTCCGCGCCCACCAAAGCACCGCAGAATCGCACCCGGACCTCTTCATCC
GGCGCCTCTGCCCCTCTCAAACCCAACACTCCCTCAAGTTACTCTCCACC
CTCCTGCACGCGCCAGAATCCTCTCTCGCGTTCGTCAAAAACGCCACCAC
GGGCGTTAACACCGTCCTGCACAACATCCCCTTCACATCCAACGATGTGA
TCATCTACTTCGACACCATCTACGGAGCAATCGAGTACGGGCTTCTTGCC
CTGCAGGAACGGACCGGCGTGAAACTTCGGAAGGTGGAGTATACGCTTCC
GATATCTCATGGGGAGATAGTGAAGAGGTTTAGGGATGTAGTGGAGAAGG
TGAGGGAAGAGGAAGGGGGAGGGTTGAACGTTAAGGCAGCGGTGTTTGAT
ATGGTGGTTAGTGTTCCTGCGATCCGGTTCCCGTTTGAGGCGTTGGTGAG
GGAATGTAAGGAGTTGGGGGTGTTGAGTGTGGTTGATGGTGCGCATGGGG
TGGGTATGTTGGATTTGGATTTGGAAGCCTTGGGAGTGGATTTCTTGACG
AGTAATTTGCATAAGTGGCTCTACATCCCCCGCGGCTGCGCCGTGCTCTA
CGTCGCGCCTCAACATCAACATCTCATGCGCACGACGTCGCCCACTTCCT
GGGGATATATATCCTCCGCTGCGGCGGAGGAAGCCCGTACAAATGGCACC
ACTGCGTCTGCGTTCAGGAATCTGTTTCAGTCGACGGCTACGAATGACGA
CACGCCGTATTTGTGTGTGCCTGAGGCGTTGAAGTTCCGGGAGGAGGTGT
GTGGTGGGGAGAAGGCTATTTATGAGTATTTGGAGAGGTTGGCGAATGAG
GCGGCGGATGTGGTGGCGGGGGTGTTGGGGACGGAGGTGTTGAGGGATGA
GGAGGGGTTGTTGACCAGGTGTGCGATGACGAATGTGAGGTTGCCGTTGA
AGGTTGGTGATGGTGGTGATGGTGATGGGTATACGGTGGTGGAGAAGGAG
GTGGTGGGGAAGGTGACGGAGTGGTTTCGTAATGTTCTCATGGATGAGTA
TAAGACGTTTGTGCCGGTGTTTGAGTACAAGGGGTGGTTGTGGATGAGGT
TGTCGGCACAGGTGTATTTGGATAAGAGTGATTTTGAGTGGTTGGGAGGT
GTGTTGAAGGAGTGTTGTGAGAGAGTGGGGAGGGAGGTTCTTCAAAAGTA
G back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006452-T1.utr5p1 | KJC3_006452-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR000192 |
| DBxref | PFAM:PF00266 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5750839..5752400 + |
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