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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5762618..5763680+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006457-T1 ID=KJC3_006457-T1|Name=KJC3_006457-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1063bp|location=Sequence derived from alignment at ch4:5762618..5763680+ (Aspergillus niger KJC3)
CTATCACTTATTCCCCTCCCTGTCTCTCTACACAGTAACACATTCTACAA
TACCAAACTCAACTCCCAACACAACCACAAAAATGACCACCACCACAGAC
CCCAACAAGAAGGGCATCCCCAGCACCCCCCACCTCCACTACATGACTCA
ATGCCTCGCCCTCGCCCGCAAAGCCCCCGCCCTCCCAACCAACTTCCGCG
TCGGCGCCCTCCTCCTCAGCCGCAGCACAACCGACACCACACCCACCTAC
TCCTCCGACATCCTCCTCTCAACCGGCTACACAATGGAATTAGCCGGTAA
CACGCACGCCGAACAATGCTGCCTATCCAACTATGCCTCCGTGCACGGCG
TGCCCGACGAGCAAGTCCACACTGTCCTTCCCCACAATGACCCTGAGAGG
AAGCTTGTCATGTACGTGACCATGGAGCCCTGCGGGAAGAGACTCTCGGG
CAATGCGCCGTGCGTGGAGAGAATCATCAATACGAGACAAGGTGGGGAGG
GACGGGGCATTCAGAAGGTGTATTTCGGGGTGAAGGAGCCCGGGACGTTT
GTGGGGGAGTCGGAGGGGGTGAGGAGGTTGGAGGAGGCCGGGGTGGAGTG
GGAGGTTGTGCCGGGCTTGGAGAGAGAGATTTTGGAGGTTGCGGTTGAGG
GACATGAGAAGGAGAAGAGGGAAGAGGAGGTGAGGAGCGCGTTGGAGGGG
GTGAAGACGGATGTTGAGCCGAGTGAGGAGGAGAGGAGGAGGCAAGAGAC
GCAGCCGAGGAATCCGAAAAAGAGGATGATGGAGGGGGAGATGATGATGT
AGACTTTTCCTGTACATTATGTTTGGTAATGGGGTGGGGAGGCGTTGAGT
TGATGCCGCTGGCGGTATTGTCTGTGTATACATGTGAACAGTGGGTGAAG
TCTGAATGCATGGCCTACGAATTTGGAGAGAGATGTACATGGATAGCTTC
CGGATTGGTGTTTGAGAACTATCTGTTACAAATACTGAGATCTAATAGTG
TGAATGCGCTGTGGAAGCTCGGATAGAATGGAGTATCATTGGCATGCTGG
ACATGCTTCTGTC back to topCoding sequence (CDS) from alignment at ch4:5762618..5763680+ >KJC3_006457-T1 ID=KJC3_006457-T1|Name=KJC3_006457-T1|organism=Aspergillus niger KJC3|type=CDS|length=720bp|location=Sequence derived from alignment at ch4:5762618..5763680+ (Aspergillus niger KJC3)
ATGACCACCACCACAGACCCCAACAAGAAGGGCATCCCCAGCACCCCCCA
CCTCCACTACATGACTCAATGCCTCGCCCTCGCCCGCAAAGCCCCCGCCC
TCCCAACCAACTTCCGCGTCGGCGCCCTCCTCCTCAGCCGCAGCACAACC
GACACCACACCCACCTACTCCTCCGACATCCTCCTCTCAACCGGCTACAC
AATGGAATTAGCCGGTAACACGCACGCCGAACAATGCTGCCTATCCAACT
ATGCCTCCGTGCACGGCGTGCCCGACGAGCAAGTCCACACTGTCCTTCCC
CACAATGACCCTGAGAGGAAGCTTGTCATGTACGTGACCATGGAGCCCTG
CGGGAAGAGACTCTCGGGCAATGCGCCGTGCGTGGAGAGAATCATCAATA
CGAGACAAGGTGGGGAGGGACGGGGCATTCAGAAGGTGTATTTCGGGGTG
AAGGAGCCCGGGACGTTTGTGGGGGAGTCGGAGGGGGTGAGGAGGTTGGA
GGAGGCCGGGGTGGAGTGGGAGGTTGTGCCGGGCTTGGAGAGAGAGATTT
TGGAGGTTGCGGTTGAGGGACATGAGAAGGAGAAGAGGGAAGAGGAGGTG
AGGAGCGCGTTGGAGGGGGTGAAGACGGATGTTGAGCCGAGTGAGGAGGA
GAGGAGGAGGCAAGAGACGCAGCCGAGGAATCCGAAAAAGAGGATGATGG
AGGGGGAGATGATGATGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006457-T1.utr5p1 | KJC3_006457-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006457-T1.utr3p1 | KJC3_006457-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016193 |
| DBxref | InterPro:IPR002125 |
| DBxref | PFAM:PF18785 |
| DBxref | PFAM:PF00383 |
| DBxref | PFAM:PF08210 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5762618..5763680 + |
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