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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5789884..5793638+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006466-T1 ID=KJC3_006466-T1|Name=KJC3_006466-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3755bp|location=Sequence derived from alignment at ch4:5789884..5793638+ (Aspergillus niger KJC3)
TTATCCTGTACCTTCTTGTACTTCCTGTACCTGGCCTGAAGACTCCAGAA
CTCCCATTCAGAATATCAATCCCTATATAATCTACTACTACATTACTCGT
ATCATTATTATTGTCTTATCCCTACTATCTAACTAACGGCGCAACAGCTG
CTCCAATAAACCTTCACCCCCTCCCCCTTCGAGGTGGTCCCTCGTGTGGG
TGTCTGCAAGCACCTTTGTAACCCGCCGTGACTTGTCGCATTCCCGTTAG
TCCGCTGGTCAGTTTATGACATACAGACAGACCAGGCAGACAGACAGACA
GACAGAAGAGTGAAAGCAAGAAAGGGAACTGGCTTGGCCAAACACATCTT
CCATTCTATTCTGAGTTCTGACTGATTCGACGGACTGGACGGTCTTTCAT
CTTGCTCTCCCCACCTCTCCAGTTCTGTTTCGTCGGACCGGCCTGATCGC
TCGCCGTTGCTGGCCATTCCTCAGGCACTCAGGCTTTCCCCCCCGGGTTC
TCGTCCCGCGTATCTTCTACTACTACTACTACTTACTACCCTCCCACCAT
TACTCAACCTTCCCATGTCTTGCTCTCCCTCCTCCCTGCTCTCTCTTGGA
TTCATTCGCAGGGACATCTATAACAATCTTCACTGTAATCTTAACCCTTC
TTTCTACCCTTCACCCCTGCCATCATCTGTTCCTTCCCCCTCTCCCCCTT
GGCGCATAGCTTCTATTCTCCCTTCCTTAACCGGATCTTAGCGCGCCCGC
AACTAACCCTCGTTCTTCTAACACCTTGATAGCACCCACCCTCTGAAGTT
ATTGTCTATTGCTGCGCAAGTCGTTCACGACGTCGCAGCGATCGAAAGTG
GCCTTGACTTCTTTGGTGTTGCAGTGCGCAACGCCGTCTATCATGCTAGA
CGAGCTGGAGAGCGCCTTCGACGAGCATCCTTCATTGGATGCGTCGCTCG
AGGACTTTGAGAGCAATAGTAACGCTCGTCAATCCCCCGTTTTCGGTCTG
CCTTCCCAGCATTCGGGCTTTCGCTCTGAGGAATCGGATGGGGAAGACGA
CGACCTCACGCCCAACGGAGATCGCTGGTCGCCTCCGGGCTTACGCAGGT
ATGACTATGTACAAGGAAGTGGTTGGTATCGCCATCAGCCCTACGTGCGC
AATGCCGATTACGACCGTTTCTGCCTTAAGCCCTCGGTCGGACTGAGCCC
GTCGCAATCGCGCGAGCCTAGCCCGCAGTATGAGGATGCGCTGGAGGCAC
CGACCGCAGGGAAACGCAGCCAGTCCGCAGAGACAGCTGACATTACCATC
GCCGCCAATGTTCCCCTGCCAGCCGACGCAGAGACCCCAGAAAAAGGTCG
GTCGCCGAGCCCGGGACCCAAAGGCGCAAGAGCTAGCCCGGATGGCGAGG
GTCTGGACTTTGGGTCGGGGAACAACCTCAGCAATTGTAGGCTTTACCTT
GGTTTGCTACCCTTTGCAGCTTCCTGGCCGGAATGAACTAATCCATGACG
CCTCAAAGATATCCGGTTCGCTGTGCGCGCGGAGGTTCAGCACCGTGAGC
CCTTTGTCGCATTCTTTAGTTACTTGCGGTCCAAATTCGATAAGATCACT
AGCTCCAAATCCAACGCAATTCTTTCTGTAATCGTTGCTTTCATATCGAT
CGCGTTCATGCGCGCCTTATTCTTACCCAGCGTTCCCGAAGCGATACCCG
ACCTGGTCAAGCTGTCAGGGTTTGCGCGCTCATTCGAGCCCCTCATCTAC
TATTCGGAGAATGGCGCACATCAAATAACCGCCTTGCAGGAGACAGGGGT
GGCCGTCTGGGATCTCGGAGAATCGGTGCGCGGGACCAACATGACCAGCG
CGCCGATCATTGTCCGCCAACTGGATGAACTCTCCGAGTCGCTCAAGTCG
CTCTCTCTGGAGCTGGCGCGCTTCTTCTCCGATGTCGAAGGGGACATTGA
CTCTATCCTACTCGCCATGGACTGGGCCAAGCGTGAACTAGAGGCCTTAT
CGTCGCAACCGCCTAGTACGTTGCCGTCGGTCGTCTTCGATAACCTCCAC
GGGATCTTTGCGCGACTGGGGGCGCTGGAGCGACTTAGCGCCACGAGTGG
GGAAGGGTCCAGCACTGAATTGACCAGCACCCCAACCACCTTTGGTAACT
TCGTCACCGCGGTCTTCGGCCAAACCTCTGCCCAGCGCACGCGCACCACC
CTCACTCGCACCTTTACCGAAATGCTCTCCGTACTAGAAGAGGCGATCAA
CAACGAACTGACGCACTCAACGGCGCTGTTCGCGCTCTTTGAAGCGATCG
ACCGCCAGTTCCTGAATCTTCAACGGACTGTCGTTCGCGAGTCGGACGTA
CAAGAGCGGGAGGAGGGCGAGATGCTGGAGTCGCTGTGGACTCGGCTCGT
GGGAGCCAATGCTGCTGCGGTTCGCAAATACGAGAAGAACAAGCGGCTGC
TCGCCAATGTCCGTAGTCGCACTGTCACTAACAAGCACCTATTGGTGGAC
CACCGCGGCCGTCTACTAACCCTCAAGGTCAATCTGGAAACTCTGCGGCG
CAAACTTGTCAGCCCGCTAGTTCGACGCAACGACTCGGTGAGCTTCACGG
GCATGGAGTCCAGTAGTCGTAGCAACGGTCGCATGTTGGGCCATGTTGAG
GCTGCGATCGACGGGCAAATCCGCGGACTCGAAGGCAGCTATGATTACCT
CAAATCTGTTCGAGACAAACAGAAAGCCAAGACCCTGGAGTTCTACTACG
GATTTGGGCGGCGATTGCCGCAGAATCCAGTCTTGGCCGACGGATCGGAC
GATCTGGGAACGGACGCAATTGACGGGGTGTGATGAAACGGAGTCGAGAG
ATCTTGCATGCATAGGCAGGCGTTCCTTGTCTTTCTGCTCCTTCTTTTGT
CTCTGCACCTGCATCACGTGGACATGGCGTTGTCGATCTGATCCATTCGG
AACCATTGGTCTTGTGTGCTGTGCACATGGTGGGCGTTCATCTACAGGTC
CCCTTTCTTCGGTTACTTACATCTCGCTTCTCTCTCCTCGCATCGCTCTG
GCTAGCTGGCGTACACTGGCGTCCATTGCCTACAGATTTTCATTGGCCTG
CCCTATCTTCTGCCTCCTTTCACCTCACCTCATCTCCATCTCCCTCCATC
TCGGTGACACGACTTCTAGGGCTTTCTCATGTTGTTTGGCATCACAATCA
AAAGCGGGAAGGGAAAACATAGACAAGATTTGATTTGATTCATTGCGATC
TATCTACCCTGCTGCAACCTGCATCCCGTGACATGTCTTGTCGTTTGTTC
CCCTCCATTGGCTGCCATCCATACACCCGTTTCTTGTTTCTCATCTTTCC
TCCCCTCTCATTTCCCCGAAGGTAAGAGGTTAGCTGGCTGGCTGGCTGGT
GTGGTTGCCTGCTTACATGCTTGATCATCTACTGTGGCGCACGTGGTCTG
GTTTTTCGTTTGGTCTCCTCAATTCGGTTCTCTCCTCTTGTCAATAGTTG
GTGGACGGAGTGTGCTCGGTATGGGTACATGGTTGGTTGGTAAGGTATCT
TTGACGGTAGTACATGGTGTTGTAGTGTGGTTGGTCTAGCTATCATCTAT
CTATCTACCTGTCATTTTCTTTGGATCTACTACTACTTATTCTTCTCTTT
ACCTGTATCGATGGTACTATTCTACCATCACATCATCATAGTATATATGC
GAGCTTACTACTACTTACTCTTTATTACTAGCATATATCACTCTGAAACA
TTTTC back to topCoding sequence (CDS) from alignment at ch4:5789884..5793638+ >KJC3_006466-T1 ID=KJC3_006466-T1|Name=KJC3_006466-T1|organism=Aspergillus niger KJC3|type=CDS|length=3738bp|location=Sequence derived from alignment at ch4:5789884..5793638+ (Aspergillus niger KJC3)
ATGCTAGACGAGCTGGAGAGCGCCTTCGACGAGCATCCTTCATTGGATGC
GTCGCTCGAGGACTTTGAGAGCAATAGTAACGCTCGTCAATCCCCCGTTT
TCGGTCTGCCTTCCCAGCATTCGGGCTTTCGCTCTGAGGAATCGGATGGG
GAAGACGACGACCTCACGCCCAACGGAGATCGCTGGTCGCCTCCGGGCTT
ACGCAGGTATGACTATGTACAAGGAAGTGGTTGGTATCGCCATCAGCCCT
ACGTGCGCAATGCCGATTACGACCGTTTCTGCCTTAAGCCCTCGGTCGGA
CTGAGCCCGTCGCAATCGCGCGAGCCTAGCCCGCAGTATGAGGATGCGCT
GGAGGCACCGACCGCAGGGAAACGCAGCCAGTCCGCAGAGACAGCTGACA
TTACCATCGCCGCCAATGTTCCCCTGCCAGCCGACGCAGAGACCCCAGAA
AAAGGTCGGTCGCCGAGCCCGGGACCCAAAGGCGCAAGAGCTAGCCCGGA
TGGCGAGGGTCTGGACTTTGGGTCGGGGAACAACCTCAGCAATTATATCC
GGTTCGCTGTGCGCGCGGAGGTTCAGCACCGTGAGCCCTTTGTCGCATTC
TTTAGTTACTTGCGGTCCAAATTCGATAAGATCACTAGCTCCAAATCCAA
CGCAATTCTTTCTGTAATCGTTGCTTTCATATCGATCGCGTTCATGCGCG
CCTTATTCTTACCCAGCGTTCCCGAAGCGATACCCGACCTGGTCAAGCTG
TCAGGGTTTGCGCGCTCATTCGAGCCCCTCATCTACTATTCGGAGAATGG
CGCACATCAAATAACCGCCTTGCAGGAGACAGGGGTGGCCGTCTGGGATC
TCGGAGAATCGGTGCGCGGGACCAACATGACCAGCGCGCCGATCATTGTC
CGCCAACTGGATGAACTCTCCGAGTCGCTCAAGTCGCTCTCTCTGGAGCT
GGCGCGCTTCTTCTCCGATGTCGAAGGGGACATTGACTCTATCCTACTCG
CCATGGACTGGGCCAAGCGTGAACTAGAGGCCTTATCGTCGCAACCGCCT
AGTACGTTGCCGTCGGTCGTCTTCGATAACCTCCACGGGATCTTTGCGCG
ACTGGGGGCGCTGGAGCGACTTAGCGCCACGAGTGGGGAAGGGTCCAGCA
CTGAATTGACCAGCACCCCAACCACCTTTGGTAACTTCGTCACCGCGGTC
TTCGGCCAAACCTCTGCCCAGCGCACGCGCACCACCCTCACTCGCACCTT
TACCGAAATGCTCTCCGTACTAGAAGAGGCGATCAACAACGAACTGACGC
ACTCAACGGCGCTGTTCGCGCTCTTTGAAGCGATCGACCGCCAGTTCCTG
AATCTTCAACGGACTGTCGTTCGCGAGTCGGACGTACAAGAGCGGGAGGA
GGGCGAGATGCTGGAGTCGCTGTGGACTCGGCTCGTGGGAGCCAATGCTG
CTGCGGTTCGCAAATACGAGAAGAACAAGCGGCTGCTCGCCAATGTCCGT
AGTCGCACTGTCACTAACAAGCACCTATTGGTGGACCACCGCGGCCGTCT
ACTAACCCTCAAGGTCAATCTGGAAACTCTGCGGCGCAAACTTGTCAGCC
CGCTAGTTCGACGCAACGACTCGGTGAGCTTCACGGGCATGGAGTCCAGT
AGTCGTAGCAACGGTCGCATGTTGGGCCATGTTGAGGCTGCGATCGACGG
GCAAATCCGCGGACTCGAAGGCAGCTATGATTACCTCAAATCTGTTCGAG
ACAAACAGAAAGCCAAGACCCTGGAGTTCTACTACGGATTTGGGCGGCGA
TTGCCGCAGAATCCAGTCTTGGCCGACGGATCGGACGATCTGGGAACGGA
CGCAATTGACGGGGTGTGAATGCTAGACGAGCTGGAGAGCGCCTTCGACG
AGCATCCTTCATTGGATGCGTCGCTCGAGGACTTTGAGAGCAATAGTAAC
GCTCGTCAATCCCCCGTTTTCGGTCTGCCTTCCCAGCATTCGGGCTTTCG
CTCTGAGGAATCGGATGGGGAAGACGACGACCTCACGCCCAACGGAGATC
GCTGGTCGCCTCCGGGCTTACGCAGGTATGACTATGTACAAGGAAGTGGT
TGGTATCGCCATCAGCCCTACGTGCGCAATGCCGATTACGACCGTTTCTG
CCTTAAGCCCTCGGTCGGACTGAGCCCGTCGCAATCGCGCGAGCCTAGCC
CGCAGTATGAGGATGCGCTGGAGGCACCGACCGCAGGGAAACGCAGCCAG
TCCGCAGAGACAGCTGACATTACCATCGCCGCCAATGTTCCCCTGCCAGC
CGACGCAGAGACCCCAGAAAAAGGTCGGTCGCCGAGCCCGGGACCCAAAG
GCGCAAGAGCTAGCCCGGATGGCGAGGGTCTGGACTTTGGGTCGGGGAAC
AACCTCAGCAATTATATCCGGTTCGCTGTGCGCGCGGAGGTTCAGCACCG
TGAGCCCTTTGTCGCATTCTTTAGTTACTTGCGGTCCAAATTCGATAAGA
TCACTAGCTCCAAATCCAACGCAATTCTTTCTGTAATCGTTGCTTTCATA
TCGATCGCGTTCATGCGCGCCTTATTCTTACCCAGCGTTCCCGAAGCGAT
ACCCGACCTGGTCAAGCTGTCAGGGTTTGCGCGCTCATTCGAGCCCCTCA
TCTACTATTCGGAGAATGGCGCACATCAAATAACCGCCTTGCAGGAGACA
GGGGTGGCCGTCTGGGATCTCGGAGAATCGGTGCGCGGGACCAACATGAC
CAGCGCGCCGATCATTGTCCGCCAACTGGATGAACTCTCCGAGTCGCTCA
AGTCGCTCTCTCTGGAGCTGGCGCGCTTCTTCTCCGATGTCGAAGGGGAC
ATTGACTCTATCCTACTCGCCATGGACTGGGCCAAGCGTGAACTAGAGGC
CTTATCGTCGCAACCGCCTAGTACGTTGCCGTCGGTCGTCTTCGATAACC
TCCACGGGATCTTTGCGCGACTGGGGGCGCTGGAGCGACTTAGCGCCACG
AGTGGGGAAGGGTCCAGCACTGAATTGACCAGCACCCCAACCACCTTTGG
TAACTTCGTCACCGCGGTCTTCGGCCAAACCTCTGCCCAGCGCACGCGCA
CCACCCTCACTCGCACCTTTACCGAAATGCTCTCCGTACTAGAAGAGGCG
ATCAACAACGAACTGACGCACTCAACGGCGCTGTTCGCGCTCTTTGAAGC
GATCGACCGCCAGTTCCTGAATCTTCAACGGACTGTCGTTCGCGAGTCGG
ACGTACAAGAGCGGGAGGAGGGCGAGATGCTGGAGTCGCTGTGGACTCGG
CTCGTGGGAGCCAATGCTGCTGCGGTTCGCAAATACGAGAAGAACAAGCG
GCTGCTCGCCAATGTCCGTAGTCGCACTGTCACTAACAAGCACCTATTGG
TGGACCACCGCGGCCGTCTACTAACCCTCAAGGTCAATCTGGAAACTCTG
CGGCGCAAACTTGTCAGCCCGCTAGTTCGACGCAACGACTCGGTGAGCTT
CACGGGCATGGAGTCCAGTAGTCGTAGCAACGGTCGCATGTTGGGCCATG
TTGAGGCTGCGATCGACGGGCAAATCCGCGGACTCGAAGGCAGCTATGAT
TACCTCAAATCTGTTCGAGACAAACAGAAAGCCAAGACCCTGGAGTTCTA
CTACGGATTTGGGCGGCGATTGCCGCAGAATCCAGTCTTGGCCGACGGAT
CGGACGATCTGGGAACGGACGCAATTGACGGGGTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006466-T1.utr3p1 | KJC3_006466-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5789884..5793638 + |
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