You are here

Home

KJC3_006481-T1, KJC3_006481-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006481-T1
Unique NameKJC3_006481-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5827926..5828588-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006481-T1 ID=KJC3_006481-T1|Name=KJC3_006481-T1|organism=Aspergillus niger KJC3|type=mRNA|length=663bp|location=Sequence derived from alignment at ch4:5827926..5828588- (Aspergillus niger KJC3)
AATCTCTCGCGCAGAAACTTTCCGAGCAGCCACTGGCTAGTCTACATCAT
CATCATGAGTCGCAATTGGATTCCGGCCCTTATGGCCATTGGCATGGGTG
TCTGGACTGGTAGGTGTTGGGGATACCCACCCTCACTCTTATGAGCATGT
GATTGCCATCAGCTTGCTAATCGTTACGTTTTCCGGGTCTGCAGGATACT
ATACCTTCCAGCCTGCATTGCGAGAATTACAGACAGAGAAGACGGGTCCT
CAGTAAGGCCGGCCTTCTAAGTCAAACCTCTTGCATGCCGTTCTTTGCTG
ACCGGAATGCATCACCGATAGGACTCTGCCGTCGCAAGACCAAAAGATCG
CACCCACACCCACTCCCAGCTCAGACAAGGATTCAAGCAAGCCAGTGACC
CAGCCCAGCGAAGCAAAGGCCCCCGAGGTTCAAAAGAGCTAGCTTGCAGA
TGAATAAGCCGCTTTGTGATGCATACACCGAAACGCCGCTGGTCGGTGAT
ATAAAGCCGGAACATCGAAGGCATGGGTCCTTTTGCGAGTTCATGATGGT
CTGGAATAGAGGATGAGGTTACTAATGGAGCCCGCACTGACTCCTCAGTA
ACTGCTAGCGGTGACTGGGAGAAATCGTCTTACATGGGCTGCAGTGGGAT
TACAAACGGAGGC
back to top

Coding sequence (CDS) from alignment at ch4:5827926..5828588-

>KJC3_006481-T1 ID=KJC3_006481-T1|Name=KJC3_006481-T1|organism=Aspergillus niger KJC3|type=CDS|length=702bp|location=Sequence derived from alignment at ch4:5827926..5828588- (Aspergillus niger KJC3)
GACTCTGCCGTCGCAAGACCAAAAGATCGCACCCACACCCACTCCCAGCT
CAGACAAGGATTCAAGCAAGCCAGTGACCCAGCCCAGCGAAGCAAAGGCC
CCCGAGGTTCAAAAGAGCTAGGATACTATACCTTCCAGCCTGCATTGCGA
GAATTACAGACAGAGAAGACGGGTCCTCAATGAGTCGCAATTGGATTCCG
GCCCTTATGGCCATTGGCATGGGTGTCTGGACTGGACTCTGCCGTCGCAA
GACCAAAAGATCGCACCCACACCCACTCCCAGCTCAGACAAGGATTCAAG
CAAGCCAGTGACCCAGCCCAGCGAAGCAAAGGCCCCCGAGGTTCAAAAGA
GCTAGGATACTATACCTTCCAGCCTGCATTGCGAGAATTACAGACAGAGA
AGACGGGTCCTCAATGAGTCGCAATTGGATTCCGGCCCTTATGGCCATTG
GCATGGGTGTCTGGACTGGACTCTGCCGTCGCAAGACCAAAAGATCGCAC
CCACACCCACTCCCAGCTCAGACAAGGATTCAAGCAAGCCAGTGACCCAG
CCCAGCGAAGCAAAGGCCCCCGAGGTTCAAAAGAGCTAGGATACTATACC
TTCCAGCCTGCATTGCGAGAATTACAGACAGAGAAGACGGGTCCTCAATG
AGTCGCAATTGGATTCCGGCCCTTATGGCCATTGGCATGGGTGTCTGGAC
TG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006481KJC3_006481Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006481-T1KJC3_006481-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006481-T1.cdsKJC3_006481-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006481-T1.utr3p1KJC3_006481-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006481-T1.exon3KJC3_006481-T1.exon3Aspergillus niger KJC3exon
KJC3_006481-T1.exon2KJC3_006481-T1.exon2Aspergillus niger KJC3exon
KJC3_006481-T1.exon1KJC3_006481-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006481-T1.utr5p1KJC3_006481-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5827926..5828588 -
Powered by Drupal