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KJC3_006487-T1, KJC3_006487-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006487-T1
Unique NameKJC3_006487-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5849015..5850822-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006487-T1 ID=KJC3_006487-T1|Name=KJC3_006487-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1808bp|location=Sequence derived from alignment at ch4:5849015..5850822- (Aspergillus niger KJC3)
AGCTGCCGATGAGCCTCCGTCTGCTGCTTTAACTTTTATTGACTGTACGA
CATTTGTATTGTTTCTCGACTTGATCCAAGTCGCTTATTGGACTTATTTC
TATCCCCCTCTCATCTTACTCAACTCCTCGACAGCCCACGCCCATGGCGG
GACCAGCAACGACGGCCGTTGCGCCGGCCGACAACAAGCGCAAGGAAAGC
AAAAGAATGATGGAAGCGCAAAAGACCTACGGCCGGGGTAAATCCATCCA
CACCCACAGCGTTCGCGACAAGAAACTGCGCAGCAACCTCAAAGCCGTGG
AAGACAAGTACAAGGAAGCAGCCCTGAAGGCCAAGGATGCGGAAATCCTG
CTCGAGCACGATGCCGGATTCCTCGAGCCGGAGGCAGAGCTGGAACGGAC
GTACAAAGTTCGACAGGATGAGATTCGCGAGAGCGTCGGTATCGAAACGG
CCAAGAAGGGATTTGAGCTCAAGTTGACGGACATGGGACCCTACCGCATG
GACTACACAAGGAACGGTCGCGAATTGCTGTTGGCCGGGCGCAAAGGGCA
TGTGGCAACGATGGACTGGCGGAATGGAAAGCTGGGATGCGAGTTGCAGT
TGAACGAGACTGTGCGCGATGCTCGGTGGCTGCACAATAATCAGTTCTTT
GCCGTGGCGCAGAAGAGATCCGTCTATATCTACGACCACGCCGGTGTGGA
ACTGCACTGTCTCAACAAGCATCTCGAGCCTCTTTTCCTTGAATTCCTGC
CCTACCACTTCCTCCTTGCGAGCGCTGTGAGTGCACCTGCCCCCCAATTT
ACAACTACAGAGTCCTAACTAATCATTCACTAGCAAATGAGCGGCTACCT
CAAATACACCGACACCTCGACGGGCCAAATGGTCGCCGAACTGCCTACCC
GCCTCGGTGCACCCACCTCCCTCGCCCAGAACCCATGGAACGCCATCCTA
CACGTCGGCCACCAAAACGGTACCGTGACTCTCTGGTCTCCCAACTCTCA
AACCGCGCTCGTGAAGGCCCTTGTCCACCGCGGCCCCGTCCGCTCGATGG
CCATCGATCGCCAAGGCCGATACATGGTATCGACCGGCCAAGACCAAAAG
ATGAACGTCTGGGACATCCGCATGTTCCGCGAAGTACACAGCTACTCATG
CTACCAACCCGGCGCATCCGTGTCCATCAGCGACCGGAACCTAACAGCCG
TAGGCTGGGGCACGCAAGTCAGCGTATGGCGGGGTCTCTTCGACGCCGCC
GCCGCAGACCAAGGCAAGGTACAGAGTCCCTACATGGCCTGGGGCGGTGA
CGGCCAACGCATCGAAAACATGCGCTGGTGCCCCTTCGAAGATGTTCTCG
GCGTGGGCCACGACCAAGGCTTCGCCAGCATCATCGTCCCCGGCGCGGGT
GAACCCAACTTCGACGCCCTGGAGGCCAACCCGTACGAGAACACCAAGCA
GCGCCAGGAAGCCGAAGTACGCGGACTCCTGAACAAGCTGCAACCGGAGA
TGATCTCGCTGGACCCCAACTTTGTCGGAAAGCTCAACACCATCAGCGAC
AAGAAGAACCGCGAGGAGCGCGATCTCGATCGCAGACCCGAAGACCCTAT
GGAGAAGCTCAAGAACCGTGGTCGGGGTCGCAACAGTGCACTGCGCAAGT
ATCTGCGCAAGAAGGGTCGGCGCAATGTCATCGACGACAAGCGCGTCAAG
GCCGAGATGTTGCGCAAGGAGCATGCTGCTCGGCACAAGGAGAAGTTGCG
CTCCGAGAGGGAGAATCTGGGTCCCGCGCTGGCGAGGTTCGCCAAGAAGG
AGATTTGA
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Coding sequence (CDS) from alignment at ch4:5849015..5850822-

>KJC3_006487-T1 ID=KJC3_006487-T1|Name=KJC3_006487-T1|organism=Aspergillus niger KJC3|type=CDS|length=3216bp|location=Sequence derived from alignment at ch4:5849015..5850822- (Aspergillus niger KJC3)
CAAATGAGCGGCTACCTCAAATACACCGACACCTCGACGGGCCAAATGGT
CGCCGAACTGCCTACCCGCCTCGGTGCACCCACCTCCCTCGCCCAGAACC
CATGGAACGCCATCCTACACGTCGGCCACCAAAACGGTACCGTGACTCTC
TGGTCTCCCAACTCTCAAACCGCGCTCGTGAAGGCCCTTGTCCACCGCGG
CCCCGTCCGCTCGATGGCCATCGATCGCCAAGGCCGATACATGGTATCGA
CCGGCCAAGACCAAAAGATGAACGTCTGGGACATCCGCATGTTCCGCGAA
GTACACAGCTACTCATGCTACCAACCCGGCGCATCCGTGTCCATCAGCGA
CCGGAACCTAACAGCCGTAGGCTGGGGCACGCAAGTCAGCGTATGGCGGG
GTCTCTTCGACGCCGCCGCCGCAGACCAAGGCAAGGTACAGAGTCCCTAC
ATGGCCTGGGGCGGTGACGGCCAACGCATCGAAAACATGCGCTGGTGCCC
CTTCGAAGATGTTCTCGGCGTGGGCCACGACCAAGGCTTCGCCAGCATCA
TCGTCCCCGGCGCGGGTGAACCCAACTTCGACGCCCTGGAGGCCAACCCG
TACGAGAACACCAAGCAGCGCCAGGAAGCCGAAGTACGCGGACTCCTGAA
CAAGCTGCAACCGGAGATGATCTCGCTGGACCCCAACTTTGTCGGAAAGC
TCAACACCATCAGCGACAAGAAGAACCGCGAGGAGCGCGATCTCGATCGC
AGACCCGAAGACCCTATGGAGAAGCTCAAGAACCGTGGTCGGGGTCGCAA
CAGTGCACTGCGCAAGTATCTGCGCAAGAAGGGTCGGCGCAATGTCATCG
ACGACAAGCGCGTCAAGGCCGAGATGTTGCGCAAGGAGCATGCTGCTCGG
CACAAGGAGAAGTTGCGCTCCGAGAGGGAGAATCTGGGTCCCGCGCTGGC
GAGGTTCGCCAAGAAGGAGATTTGAATGGCGGGACCAGCAACGACGGCCG
TTGCGCCGGCCGACAACAAGCGCAAGGAAAGCAAAAGAATGATGGAAGCG
CAAAAGACCTACGGCCGGGGTAAATCCATCCACACCCACAGCGTTCGCGA
CAAGAAACTGCGCAGCAACCTCAAAGCCGTGGAAGACAAGTACAAGGAAG
CAGCCCTGAAGGCCAAGGATGCGGAAATCCTGCTCGAGCACGATGCCGGA
TTCCTCGAGCCGGAGGCAGAGCTGGAACGGACGTACAAAGTTCGACAGGA
TGAGATTCGCGAGAGCGTCGGTATCGAAACGGCCAAGAAGGGATTTGAGC
TCAAGTTGACGGACATGGGACCCTACCGCATGGACTACACAAGGAACGGT
CGCGAATTGCTGTTGGCCGGGCGCAAAGGGCATGTGGCAACGATGGACTG
GCGGAATGGAAAGCTGGGATGCGAGTTGCAGTTGAACGAGACTGTGCGCG
ATGCTCGGTGGCTGCACAATAATCAGTTCTTTGCCGTGGCGCAGAAGAGA
TCCGTCTATATCTACGACCACGCCGGTGTGGAACTGCACTGTCTCAACAA
GCATCTCGAGCCTCTTTTCCTTGAATTCCTGCCCTACCACTTCCTCCTTG
CGAGCGCTCAAATGAGCGGCTACCTCAAATACACCGACACCTCGACGGGC
CAAATGGTCGCCGAACTGCCTACCCGCCTCGGTGCACCCACCTCCCTCGC
CCAGAACCCATGGAACGCCATCCTACACGTCGGCCACCAAAACGGTACCG
TGACTCTCTGGTCTCCCAACTCTCAAACCGCGCTCGTGAAGGCCCTTGTC
CACCGCGGCCCCGTCCGCTCGATGGCCATCGATCGCCAAGGCCGATACAT
GGTATCGACCGGCCAAGACCAAAAGATGAACGTCTGGGACATCCGCATGT
TCCGCGAAGTACACAGCTACTCATGCTACCAACCCGGCGCATCCGTGTCC
ATCAGCGACCGGAACCTAACAGCCGTAGGCTGGGGCACGCAAGTCAGCGT
ATGGCGGGGTCTCTTCGACGCCGCCGCCGCAGACCAAGGCAAGGTACAGA
GTCCCTACATGGCCTGGGGCGGTGACGGCCAACGCATCGAAAACATGCGC
TGGTGCCCCTTCGAAGATGTTCTCGGCGTGGGCCACGACCAAGGCTTCGC
CAGCATCATCGTCCCCGGCGCGGGTGAACCCAACTTCGACGCCCTGGAGG
CCAACCCGTACGAGAACACCAAGCAGCGCCAGGAAGCCGAAGTACGCGGA
CTCCTGAACAAGCTGCAACCGGAGATGATCTCGCTGGACCCCAACTTTGT
CGGAAAGCTCAACACCATCAGCGACAAGAAGAACCGCGAGGAGCGCGATC
TCGATCGCAGACCCGAAGACCCTATGGAGAAGCTCAAGAACCGTGGTCGG
GGTCGCAACAGTGCACTGCGCAAGTATCTGCGCAAGAAGGGTCGGCGCAA
TGTCATCGACGACAAGCGCGTCAAGGCCGAGATGTTGCGCAAGGAGCATG
CTGCTCGGCACAAGGAGAAGTTGCGCTCCGAGAGGGAGAATCTGGGTCCC
GCGCTGGCGAGGTTCGCCAAGAAGGAGATTTGAATGGCGGGACCAGCAAC
GACGGCCGTTGCGCCGGCCGACAACAAGCGCAAGGAAAGCAAAAGAATGA
TGGAAGCGCAAAAGACCTACGGCCGGGGTAAATCCATCCACACCCACAGC
GTTCGCGACAAGAAACTGCGCAGCAACCTCAAAGCCGTGGAAGACAAGTA
CAAGGAAGCAGCCCTGAAGGCCAAGGATGCGGAAATCCTGCTCGAGCACG
ATGCCGGATTCCTCGAGCCGGAGGCAGAGCTGGAACGGACGTACAAAGTT
CGACAGGATGAGATTCGCGAGAGCGTCGGTATCGAAACGGCCAAGAAGGG
ATTTGAGCTCAAGTTGACGGACATGGGACCCTACCGCATGGACTACACAA
GGAACGGTCGCGAATTGCTGTTGGCCGGGCGCAAAGGGCATGTGGCAACG
ATGGACTGGCGGAATGGAAAGCTGGGATGCGAGTTGCAGTTGAACGAGAC
TGTGCGCGATGCTCGGTGGCTGCACAATAATCAGTTCTTTGCCGTGGCGC
AGAAGAGATCCGTCTATATCTACGACCACGCCGGTGTGGAACTGCACTGT
CTCAACAAGCATCTCGAGCCTCTTTTCCTTGAATTCCTGCCCTACCACTT
CCTCCTTGCGAGCGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006487KJC3_006487Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006487-T1KJC3_006487-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006487-T1.cdsKJC3_006487-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006487-T1.exon2KJC3_006487-T1.exon2Aspergillus niger KJC3exon
KJC3_006487-T1.exon1KJC3_006487-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006487-T1.utr5p1KJC3_006487-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261UMG
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR012952
DBxrefInterPro:IPR001680
DBxrefPFAM:PF08149
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5849015..5850822 -
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