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KJC3_006489-T1, KJC3_006489-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006489-T1
Unique NameKJC3_006489-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5854001..5855609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006489-T1 ID=KJC3_006489-T1|Name=KJC3_006489-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1609bp|location=Sequence derived from alignment at ch4:5854001..5855609- (Aspergillus niger KJC3)
CACTGCTTCTCCTCATCTTCTAGACAATCATCCCCACTTCTCTTTGCCCG
CAACCTGACCTCTAGCATCACTCTCCTCTTCACCTGCTCGGGCCGACAAT
CTCTTCACAAAATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGTAATC
CCCCCGAACCCCGCTGTCCATCATCGCTATGCTTGGAATTCGACGATCGC
TAACCCCTATGACGTACATTAGGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAGTAA
GCCAATGATCTCCCCCCTGTCTCGGATCAACGAGCTCTAACTCGTTGCCA
AACACACAGACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATT
CAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCTGACTGA
AGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGC
TCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGTCGCGCG
GCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGA
TACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACG
GTGACAATGCTGAAGCGTACGTCTATCCTCGGCGTTTTCATATACAAATC
TAACTTGATGTGTTGTTCTCCAGACTTGCCAACAAGCACTACCTTAAGGC
AGCGGACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACT
ACGAGCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCC
GTTAAGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATGT
ACGGCTGTCCTCATCTGCCCAAACCATTTACACAGTACTGATTCCACACA
GGACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACA
CCACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAG
ACCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATT
CGACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGA
TCAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTATTCT
TTTCTATTCTATTCCCAGCAACAATATCATCGTTTTTCTGGTTCACTTCG
ATATGTTCATCCATTCGCTTGTTGTTGGTGGATTAGTTAACTAGGCAGAC
GTTATATGTTCCCTACCCTTACCCCGTTGGCTGGTCCCATGGTAGATGGA
TGCTGTGCCATCGTATAATTGCTTGAGGTCTGTCTTTCGTGCAAATATAC
ATGGTGCCCTTGCCTGTCCTTTTCCTGTTCCGTCTTGTTTTGCTTATTAA
ACCGCCCTACCATATTTCATTGTTCACATTCAGGTTACACACATAGATGC
GTGGCCTGCCTTATTGACAGATATCGATATTCGTGAATGAACAAAATTGC
CACCTCGAC
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Coding sequence (CDS) from alignment at ch4:5854001..5855609-

>KJC3_006489-T1 ID=KJC3_006489-T1|Name=KJC3_006489-T1|organism=Aspergillus niger KJC3|type=CDS|length=4395bp|location=Sequence derived from alignment at ch4:5854001..5855609- (Aspergillus niger KJC3)
GACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGACATCGACAC
CACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGA
CCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTC
GACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGAT
CAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAAC
AAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTA
CAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAATCAATAACA
ACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGC
CACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCC
TCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCAAACACCCT
GACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTC
GCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGT
CGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACT
GGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGT
TCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTG
GTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCT
GATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGG
CCCAAGATCCCAGAGTTCTGCTCCAACGAGACCTGGTGGCCGCCAACCGC
GCCCTCGAAAACTACCGCGACATCGACACCACCTTCGCCTCGACAAGAGA
GCACCAGCTCCTCGTCGACCTGATCCAGACCATCGAAGCCGGCGACCAGG
AAGCATTCGCCGACAAGCTGTTCCAATTCGACCAGCTCAGCAAGTTGGAC
AAGTGGAAGACAACTCTTCTGTTGCGGATCAAGAACAGTATCGAGGAGCA
GGGCGAGGATTTCTCTTAGACTTGCCAACAAGCACTACCTTAAGGCAGCG
GACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAGCACTACGA
GCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAAATGGTCCGTTA
AGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGAATACAAGG
AAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCAGACCCAGAACCTT
AACGAGCCCGACGATGCAGCAAACACCCTGACTGAAGCGTTCAAGGTCTA
CCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTCTCCAGTGCCATCC
AACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGCCACGCAACAGCAA
CATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATACGAAGAAGGCGCT
GGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGTGACAATGCTGAAG
CGCCGACAAAGCGCTTAGCAGCGCATCTGGTGGCTTTAGCTTCTTCGGTG
GAAGGACAGAGAAGTACGAGAATGCGGCTGATCTCTACACACAAGCTGCG
AACGCCTTCCGAGTGCAGAAGCAGAATGGCCCAAGATCCCAGAGTTCTGC
TCCAACGAGACCTGGTGGCCGCCAACCGCGCCCTCGAAAACTACCGCGAC
ATCGACACCACCTTCGCCTCGACAAGAGAGCACCAGCTCCTCGTCGACCT
GATCCAGACCATCGAAGCCGGCGACCAGGAAGCATTCGCCGACAAGCTGT
TCCAATTCGACCAGCTCAGCAAGTTGGACAAGTGGAAGACAACTCTTCTG
TTGCGGATCAAGAACAGTATCGAGGAGCAGGGCGAGGATTTCTCTTAGAC
TTGCCAACAAGCACTACCTTAAGGCAGCGGACCTGGCCGCTCTCGAAGGC
GACTACTACAAGGCTATTGAGCACTACGAGCGGATCGGCCGCTCATCAAT
CAATAACAACCTGATGAAATGGTCCGTTAAGGACTACTTCCTCAAGGCTG
GCATCTGCCACTTGGCGACGAATACAAGGAAGCTGGTCTTGCCTTCGAAA
AGGCTGCCTCCATTCAGACCCAGAACCTTAACGAGCCCGACGATGCAGCA
AACACCCTGACTGAAGCGTTCAAGGTCTACCGCAAATCCGACCCCGAGGA
CGCCGCTCGCGTGCTCTCCAGTGCCATCCAACACTACGTGCTAAAGGGTA
ACCTCCGTCGCGCGGCCACGCAACAGCAACATCTGGCCGAGGTCTATGAG
GTGGAACTGGGAGATACGAAGAAGGCGCTGGAAGCCTACGAGAAAGCGGC
GGAGTGGTTCGACGGTGACAATGCTGAAGCGCCGACAAAGCGCTTAGCAG
CGCATCTGGTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAAGTACGAGA
ATGCGGCTGATCTCTACACACAAGCTGCGAACGCCTTCCGAGTGCAGAAG
CAGAATGGCCCAAGATCCCAGAGTTCTGCTCCAACGAGACCTGGTGGCCG
CCAACCGCGCCCTCGAAAACTACCGCGACATCGACACCACCTTCGCCTCG
ACAAGAGAGCACCAGCTCCTCGTCGACCTGATCCAGACCATCGAAGCCGG
CGACCAGGAAGCATTCGCCGACAAGCTGTTCCAATTCGACCAGCTCAGCA
AGTTGGACAAGTGGAAGACAACTCTTCTGTTGCGGATCAAGAACAGTATC
GAGGAGCAGGGCGAGGATTTCTCTTAGACTTGCCAACAAGCACTACCTTA
AGGCAGCGGACCTGGCCGCTCTCGAAGGCGACTACTACAAGGCTATTGAG
CACTACGAGCGGATCGGCCGCTCATCAATCAATAACAACCTGATGAAATG
GTCCGTTAAGGACTACTTCCTCAAGGCTGGCATCTGCCACTTGGCGACGA
ATACAAGGAAGCTGGTCTTGCCTTCGAAAAGGCTGCCTCCATTCAGACCC
AGAACCTTAACGAGCCCGACGATGCAGCAAACACCCTGACTGAAGCGTTC
AAGGTCTACCGCAAATCCGACCCCGAGGACGCCGCTCGCGTGCTCTCCAG
TGCCATCCAACACTACGTGCTAAAGGGTAACCTCCGTCGCGCGGCCACGC
AACAGCAACATCTGGCCGAGGTCTATGAGGTGGAACTGGGAGATACGAAG
AAGGCGCTGGAAGCCTACGAGAAAGCGGCGGAGTGGTTCGACGGTGACAA
TGCTGAAGCGCCGACAAAGCGCTTAGCAGCGCATCTGGTGGCTTTAGCTT
CTTCGGTGGAAGGACAGAGAAGTACGAGAATGCGGCTGATCTCTACACAC
AAGCTGCGAACGCCTTCCGAGTGCAGAAGCAGAATGGCCCAAGATCCCAG
AGTTCTGCTCCAACGAGACCTGGTGGCCGCCAACCGCGCCCTCGAAAACT
ACCGCGACATCGACACCACCTTCGCCTCGACAAGAGAGCACCAGCTCCTC
GTCGACCTGATCCAGACCATCGAAGCCGGCGACCAGGAAGCATTCGCCGA
CAAGCTGTTCCAATTCGACCAGCTCAGCAAGTTGGACAAGTGGAAGACAA
CTCTTCTGTTGCGGATCAAGAACAGTATCGAGGAGCAGGGCGAGGATTTC
TCTTAGACTTGCCAACAAGCACTACCTTAAGGCAGCGGACCTGGCCGCTC
TCGAAGGCGACTACTACAAGGCTATTGAGCACTACGAGCGGATCGGCCGC
TCATCAATCAATAACAACCTGATGAAATGGTCCGTTAAGGACTACTTCCT
CAAGGCTGGCATCTGCCACTTGGCGACGAATACAAGGAAGCTGGTCTTGC
CTTCGAAAAGGCTGCCTCCATTCAGACCCAGAACCTTAACGAGCCCGACG
ATGCAGCAAACACCCTGACTGAAGCGTTCAAGGTCTACCGCAAATCCGAC
CCCGAGGACGCCGCTCGCGTGCTCTCCAGTGCCATCCAACACTACGTGCT
AAAGGGTAACCTCCGTCGCGCGGCCACGCAACAGCAACATCTGGCCGAGG
TCTATGAGGTGGAACTGGGAGATACGAAGAAGGCGCTGGAAGCCTACGAG
AAAGCGGCGGAGTGGTTCGACGGTGACAATGCTGAAGCGCCGACAAAGCG
CTTAGCAGCGCATCTGGTGGCTTTAGCTTCTTCGGTGGAAGGACAGAGAA
GTACGAGAATGCGGCTGATCTCTACACACAAGCTGCGAACGCCTTCCGAG
TGCAGAAGCAGAATGGCCCAAGATCCCAGAGTTCTGCTCCAACGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006489KJC3_006489Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006489-T1KJC3_006489-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006489-T1.cdsKJC3_006489-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006489-T1.utr3p1KJC3_006489-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006489-T1.exon5KJC3_006489-T1.exon5Aspergillus niger KJC3exon
KJC3_006489-T1.exon4KJC3_006489-T1.exon4Aspergillus niger KJC3exon
KJC3_006489-T1.exon3KJC3_006489-T1.exon3Aspergillus niger KJC3exon
KJC3_006489-T1.exon2KJC3_006489-T1.exon2Aspergillus niger KJC3exon
KJC3_006489-T1.exon1KJC3_006489-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006489-T1.utr5p1KJC3_006489-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263X22
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR000744
DBxrefPFAM:PF14938
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5854001..5855609 -
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