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KJC3_006513-T1, KJC3_006513-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006513-T1
Unique NameKJC3_006513-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5928835..5930312+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006513-T1 ID=KJC3_006513-T1|Name=KJC3_006513-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1478bp|location=Sequence derived from alignment at ch4:5928835..5930312+ (Aspergillus niger KJC3)
CGTTCAAGTGTGGACCCAACCTTCAGCTATACACCACACCACGTTAGCCG
AGCACCACTCGATCCCCTCTTCAGAGCTGTGCTACTAACTAGTGCGTACA
CCATCCGACCAAGTTTCCCCCGCCAGCCACATTATCACTATCTAAGAGAT
AGTCAAGGAGTCAGCGAAAACAAAATGTCTACCTCTTCGGGTCTGCTCTA
TGCGGCCTCAAGAATCGATCCTCCATCGAAAATATCAGCAGATGTCTTCA
ACGCCTGGTATGATGGCGTCCATGTGCCTGATGTCCTTAAGACCTCGGGA
ATCAACACCGCAGTCCGCTATGAAACGGCTGTAGTGCCCCAAGACAGTTC
CCCGTGGGCGTTCCTTGCTCTCTACCCTGTTCCAGACATTGAGTTCTTAA
ACACGGAGGAGTTCGCGAGCATTCCAGCGACTAGTGATGCTCTGCCGGGG
CCAACACACAGTTGCATGGATATAGCGCAGTTCGATATCAGGCGATACCG
CGAGGTCGGGAAGCGACACGACTTGGATATGCCAACAGGTGAGTATATGT
GAGAGAAGAGAAGGGAAGAGCAAAGCTGATTCACTTCTTCTAATAATGTT
GGATGTGTTAGGACCAACGTCGCATCTTCTTACTGTGGAATTTGACTTGC
CTTCACACATTGACATATCTGATGACCAGGCTGTACTGGACTGGTTCTGT
GGGATATACAGTGGTGGCACGCCTCAGCGGGTTGCCATTCATGAAGTCTT
CTGGGCTATGTTGTACCCGAACGAGAAACCAGCAGAGGTGCCACGTTGTT
TGGCGGTGGTAAGCTGTGGTGTTCTTTCCCCATTTGCCATCATCTTGACT
GATAGAATGATGATAGCTCGAATTCCACGGCGATGAGAATGTGTACGATG
AAGCCATCAAAGAGATCCAATTGGTTGCGAAGGTTGGCCAATGGAAACTG
CACAAGGCCTTTGGCTGGCCATAAGTTGTCTGCTGAAGACCCGACTTTAA
CGTTAATTCAATGCTATATCTTTATTATTGAACGTACTATGGCTGTGTCT
GTTGTTGGTATCTTGCGTTCTATGTCTGGGTTACTTGTTGTGTTCCGGAG
TAGTGAAATATGTCTCAAATTTATGGAGGCCACAGGATCTTGACGCCCTG
AGTTTTGCCGCTTAGACGGAGGACCCGTCAAGTCTAAACCTTCGTACATG
AAAAGATAAATACTCGACGTTATTCTATGACTGAGGGTTTGTAGACCGAC
GGATCGACAAAGGGCGTCCCCCTCCGTCCTTGTTTGGAGAATCCCCAGCG
AATCTGGCCTGGCATAGCAACCTCGACATCAAGATGCTGCGCAAAGGTCC
AAACCAATCCGGGATCTTTCTGAAACCCACGCCCGACAAGGACTACATCC
AGTCCTTCTTCTTCGAGCAGCCGGTTTGCCAGCTTCCCGTCTCTGATATG
ACCAACAGTCGCAACAAGCATCCTTTCC
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Coding sequence (CDS) from alignment at ch4:5928835..5930312+

>KJC3_006513-T1 ID=KJC3_006513-T1|Name=KJC3_006513-T1|organism=Aspergillus niger KJC3|type=CDS|length=2007bp|location=Sequence derived from alignment at ch4:5928835..5930312+ (Aspergillus niger KJC3)
ATGTCTACCTCTTCGGGTCTGCTCTATGCGGCCTCAAGAATCGATCCTCC
ATCGAAAATATCAGCAGATGTCTTCAACGCCTGGTATGATGGCGTCCATG
TGCCTGATGTCCTTAAGACCTCGGGAATCAACACCGCAGTCCGCTATGAA
ACGGCTGTAGTGCCCCAAGACAGTTCCCCGTGGGCGTTCCTTGCTCTCTA
CCCTGTTCCAGACATTGAGTTCTTAAACACGGAGGAGTTCGCGAGCATTC
CAGCGACTAGTGATGCTCTGCCGGGGCCAACACACAGTTGCATGGATATA
GCGCAGTTCGATATCAGGCGATACCGCGAGGTCGGGAAGCGACACGACTT
GGATATGCCAACAGGACCAACGTCGCATCTTCTTACTGTGGAATTTGACT
TGCCTTCACACATTGACATATCTGATGACCAGGCTGTACTGGACTGGTTC
TGTGGGATATACAGTGGTGGCACGCCTCAGCGGGTTGCCATTCATGAAGT
CTTCTGGGCTATGTTGTACCCGAACGAGAAACCAGCAGAGGTGCCACGTT
GTTTGGCGGTGCTCGAATTCCACGGCGATGAGAATGTGTACGATGAAGCC
ATCAAAGAGATCCAATTGGTTGCGAAGGTTGGCCAATGGAAACTGCACAA
GGCCTTTGGCTGGCCATAAATGTCTACCTCTTCGGGTCTGCTCTATGCGG
CCTCAAGAATCGATCCTCCATCGAAAATATCAGCAGATGTCTTCAACGCC
TGGTATGATGGCGTCCATGTGCCTGATGTCCTTAAGACCTCGGGAATCAA
CACCGCAGTCCGCTATGAAACGGCTGTAGTGCCCCAAGACAGTTCCCCGT
GGGCGTTCCTTGCTCTCTACCCTGTTCCAGACATTGAGTTCTTAAACACG
GAGGAGTTCGCGAGCATTCCAGCGACTAGTGATGCTCTGCCGGGGCCAAC
ACACAGTTGCATGGATATAGCGCAGTTCGATATCAGGCGATACCGCGAGG
TCGGGAAGCGACACGACTTGGATATGCCAACAGGACCAACGTCGCATCTT
CTTACTGTGGAATTTGACTTGCCTTCACACATTGACATATCTGATGACCA
GGCTGTACTGGACTGGTTCTGTGGGATATACAGTGGTGGCACGCCTCAGC
GGGTTGCCATTCATGAAGTCTTCTGGGCTATGTTGTACCCGAACGAGAAA
CCAGCAGAGGTGCCACGTTGTTTGGCGGTGCTCGAATTCCACGGCGATGA
GAATGTGTACGATGAAGCCATCAAAGAGATCCAATTGGTTGCGAAGGTTG
GCCAATGGAAACTGCACAAGGCCTTTGGCTGGCCATAAATGTCTACCTCT
TCGGGTCTGCTCTATGCGGCCTCAAGAATCGATCCTCCATCGAAAATATC
AGCAGATGTCTTCAACGCCTGGTATGATGGCGTCCATGTGCCTGATGTCC
TTAAGACCTCGGGAATCAACACCGCAGTCCGCTATGAAACGGCTGTAGTG
CCCCAAGACAGTTCCCCGTGGGCGTTCCTTGCTCTCTACCCTGTTCCAGA
CATTGAGTTCTTAAACACGGAGGAGTTCGCGAGCATTCCAGCGACTAGTG
ATGCTCTGCCGGGGCCAACACACAGTTGCATGGATATAGCGCAGTTCGAT
ATCAGGCGATACCGCGAGGTCGGGAAGCGACACGACTTGGATATGCCAAC
AGGACCAACGTCGCATCTTCTTACTGTGGAATTTGACTTGCCTTCACACA
TTGACATATCTGATGACCAGGCTGTACTGGACTGGTTCTGTGGGATATAC
AGTGGTGGCACGCCTCAGCGGGTTGCCATTCATGAAGTCTTCTGGGCTAT
GTTGTACCCGAACGAGAAACCAGCAGAGGTGCCACGTTGTTTGGCGGTGC
TCGAATTCCACGGCGATGAGAATGTGTACGATGAAGCCATCAAAGAGATC
CAATTGGTTGCGAAGGTTGGCCAATGGAAACTGCACAAGGCCTTTGGCTG
GCCATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006513KJC3_006513Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006513-T1KJC3_006513-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006513-T1.utr5p1KJC3_006513-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006513-T1.exon1KJC3_006513-T1.exon1Aspergillus niger KJC3exon
KJC3_006513-T1.exon2KJC3_006513-T1.exon2Aspergillus niger KJC3exon
KJC3_006513-T1.exon3KJC3_006513-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006513-T1.cdsKJC3_006513-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006513-T1.utr3p1KJC3_006513-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5928835..5930312 +
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