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KJC3_006516-T1, KJC3_006516-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006516-T1
Unique NameKJC3_006516-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5934941..5936090+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006516-T1 ID=KJC3_006516-T1|Name=KJC3_006516-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1150bp|location=Sequence derived from alignment at ch4:5934941..5936090+ (Aspergillus niger KJC3)
GGAGAAGAAGAAGAAAAACAATGATTATGGAAGAATGCACTGTACATAAA
GACCCCTACTTCGAATTTAAGCAGCATTTCACTTTCAGATCAGCGAGTCT
ATCCATGCTTGTTCAATCCTACTGCATCACTCTCGAGCCTTTTCTTTTTT
TCTGAATTCTACTATACACCCCTGCAGCACGACAACCATGTTCAAATACT
CGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATCAACCACA
ACCACAACCACTAGCAAGCCAGGCTACTCGCGGAACATCACCTCGACCGT
TACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCAGTGCTTAATCTAG
ATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGCCGGGCAG
CTATGGATTGACAATGTTGCGAATTGGATTGATGCGTATGTACTCCATTG
GACCTGAATACATTATCTCGGATCATACTCATGCTCTAAAAGCGTGCACA
AGCAGGACTCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTCTCCAAC
ACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAG
CCTCGGAAATGCCACAGCATCGAGTCCCGATAGCCAAATTTATTCTGCTT
TCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGGTATTAT
GCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGA
TACGGTGATTCTGGTAGGTGCAGCCATAAAACGGAACGGAAGTAAAGTCA
ACAGACTCAGTCAACAGGTTAGCTGACCACAAGTGTAACTGGTAGTCCGG
CATCCGTACTTCGGGAGTAGTGCTTAGCACCGCGCTTCGTCTGTTGGACA
TGAACTATAATGTGTAAGCCAGCATCACGATTCAAGACCAATCAGGAGAG
AAAACAGTGGGCACTGCTAACGCATCGTGCTTGACGACAGCTACGTTATC
TCGAACAATACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAA
GATTATCTTGGAGGGCATACTCCCCGAATTACCAGTCAATGTAATTACCA
TCGAACAGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAG
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Coding sequence (CDS) from alignment at ch4:5934941..5936090+

>KJC3_006516-T1 ID=KJC3_006516-T1|Name=KJC3_006516-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch4:5934941..5936090+ (Aspergillus niger KJC3)
ATGTTCAAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCT
CTCATCAACCACAACCACAACCACTAGCAAGCCAGGCTACTCGCGGAACA
TCACCTCGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCA
GTGCTTAATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCAC
TAAGGCCGGGCAGCTATGGATTGACAATGTTGCGAATTGGATTGATGCCG
TGCACAAGCAGGACTCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTC
TCCAACACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGT
GACTAGCCTCGGAAATGCCACAGCATCGAGTCCCGATAGCCAAATTTATT
CTGCTTTCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGG
TATTATGCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAA
GATTGATACGGTGATTCTGTCCGGCATCCGTACTTCGGGAGTAGTGCTTA
GCACCGCGCTTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCG
AACAATACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGAT
TATCTTGGAGGGCATACTCCCCGAATTACCAGTCAATGTAATTACCATCG
AACAGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAGATG
TTCAAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTC
ATCAACCACAACCACAACCACTAGCAAGCCAGGCTACTCGCGGAACATCA
CCTCGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCAGTG
CTTAATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAA
GGCCGGGCAGCTATGGATTGACAATGTTGCGAATTGGATTGATGCCGTGC
ACAAGCAGGACTCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTCTCC
AACACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGAC
TAGCCTCGGAAATGCCACAGCATCGAGTCCCGATAGCCAAATTTATTCTG
CTTTCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGGTAT
TATGCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGAT
TGATACGGTGATTCTGTCCGGCATCCGTACTTCGGGAGTAGTGCTTAGCA
CCGCGCTTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCGAAC
AATACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTAT
CTTGGAGGGCATACTCCCCGAATTACCAGTCAATGTAATTACCATCGAAC
AGGCCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAGATGTTC
AAATACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATC
AACCACAACCACAACCACTAGCAAGCCAGGCTACTCGCGGAACATCACCT
CGACCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCAGTGCTT
AATCTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGC
CGGGCAGCTATGGATTGACAATGTTGCGAATTGGATTGATGCCGTGCACA
AGCAGGACTCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTCTCCAAC
ACTTACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAG
CCTCGGAAATGCCACAGCATCGAGTCCCGATAGCCAAATTTATTCTGCTT
TCAAGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGGTATTAT
GCTGGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGA
TACGGTGATTCTGTCCGGCATCCGTACTTCGGGAGTAGTGCTTAGCACCG
CGCTTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCGAACAAT
ACGATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTATCTT
GGAGGGCATACTCCCCGAATTACCAGTCAATGTAATTACCATCGAACAGG
CCATTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAGATGTTCAAA
TACTCGCTTGCATGCCTGGCCCTCCTGGCAACCGGGTGTCTCTCATCAAC
CACAACCACAACCACTAGCAAGCCAGGCTACTCGCGGAACATCACCTCGA
CCGTTACCGACCCCTCGTTCAGTTTCGGGCAACACTATGCAGTGCTTAAT
CTAGATCTTATCGATGGATTGGTGGCAAATGTGAATACCACTAAGGCCGG
GCAGCTATGGATTGACAATGTTGCGAATTGGATTGATGCCGTGCACAAGC
AGGACTCTCCTCCCTTGAGTATCTTCACTCGCATCTTCTTCTCCAACACT
TACCGTCCTGAACTCGGCAACGCACCCTTCGCCAGCGCGGTGACTAGCCT
CGGAAATGCCACAGCATCGAGTCCCGATAGCCAAATTTATTCTGCTTTCA
AGACCCTAGATAATTGGGATGTGGTGCTGCAGAAAGCGCGGTATTATGCT
GGTGCTGGGAATCAGTTGGAGGAGATCCTCAGTAGTCAAAAGATTGATAC
GGTGATTCTGTCCGGCATCCGTACTTCGGGAGTAGTGCTTAGCACCGCGC
TTCGTCTGTTGGACATGAACTATAATGTCTACGTTATCTCGAACAATACG
ATCGAGACTCCCTCGACGTATGCGCCCCTGAATCAGAAGATTATCTTGGA
GGGCATACTCCCCGAATTACCAGTCAATGTAATTACCATCGAACAGGCCA
TTGGGGCTCTCAACCGCTCCGGACCAGCTGTCTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006516KJC3_006516Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006516-T1KJC3_006516-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006516-T1.utr5p1KJC3_006516-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006516-T1.exon1KJC3_006516-T1.exon1Aspergillus niger KJC3exon
KJC3_006516-T1.exon2KJC3_006516-T1.exon2Aspergillus niger KJC3exon
KJC3_006516-T1.exon3KJC3_006516-T1.exon3Aspergillus niger KJC3exon
KJC3_006516-T1.exon4KJC3_006516-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006516-T1.cdsKJC3_006516-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR000868
DBxrefInterPro:IPR036380
DBxrefPFAM:PF00857
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5934941..5936090 +
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