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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5943118..5945444+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006518-T1 ID=KJC3_006518-T1|Name=KJC3_006518-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2327bp|location=Sequence derived from alignment at ch4:5943118..5945444+ (Aspergillus niger KJC3)
TTCATCTCAATTTCCTTTCCCCTCTCCCCTTATCGGGGTTTTGTGGCTAG
GCTGAGAGGTTCACCGCTTAATGCTCGTATTTGATCGCGTTCTTGCGCCC
ATATGTAATCCCGCCGTATATTCCCTCCCTCTCACTTCTCTCCCTCGACT
GGCAATGGTCATCTGGAACCATGCCTCTTGAGTCCAATGAACCCCTCGAC
CGCGAGGATGCCCCGTTCCTTGCCTCGGGTCAAAGGCCCTCGTCCCCTGT
GGATGAAGGGGAGCCCAGTCCGTCGGATGCACAGAAAGAACACCTTCGGA
AAACTCGCTTTCGCTTAATGTTGACCCTCTTTGCCATGATTCTGGCCGTC
GAAGTTGGCATCTGCATGTCCAACGGCCCCGTCACCCGTATATACGAGTC
CATCGCCTGTCGAGAGTACTACGCGCAACATGATCCCACCCAGATTGGGG
CTGACGGCGAGGTCCAGGAGGAATTGTGCAAGGTTAAGGCGGTCCAGCAG
GATCTGGCTGCAGTGAAGGGCTATATGGAGTTTTTCGATGGCATTCTCAG
TAGGTCACGACGAAGGCACCACTGTTTCGGACGAGGCTACGTCGCATCTC
TTGTTCCCTAGTCTCTACCGATCGGGCGCCTCCCTTTTTGCACTTCATGC
GCGACATATAGACGAGGACCCTTATTCACGTTCCTTCTCATCCAGGTGCT
GTGCTAGCAATTCCATACGGTCTGTTGGCTGATCGACGGGGACGGAAATC
CACCATTTGTCTCAGCATTCCCGGATTCGCCCTGAACTGCATCATTCAGC
TGGTGGTGATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCA
TCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCAT
TATCTGGACCATGATGTCGGATGTGTCAACCGAAGAGGAAAGGTATGCGT
GTTCTAGATGCCACAATCGTTGGTGGGATTATAGCTAATGATTCTCAGAG
CGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCGCC
TCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGACCCGTGGCTTCCTCT
CTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCTTATCGC
TACCGGAAACAATGCGTGTAGGATCATCGCAGCCGACTTGGAAGCAACCG
AGCATGGAGATGAGTCAGGTATCACCGGGAAACGCCGAGTATAAGGAAGT
TCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGATGAAGAGACTCTTC
AAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCACGACCAACCTTCTTC
GCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTCAT
TTTCAGGAACAAACAGATCATGCTCCTCCTTACCGCGTTTCTTGTCTATC
GACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCCACGCGG
TATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATGTCATTCAAGCCGGC
CTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGCTATTTCACGACAGC
TGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGCAGCTCATGCGCATC
AGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCTAG
CGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGGAT
TTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGGTGAATCGAGAAGAA
ACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAGTCGGTGGGCAATGT
CATTGCCAGTTTGTCCATTACCACGGTGTTCCAAATCGGGCTGGAACTCG
GAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGGCGACGGCCTTCACT
CTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCTTCTCGTCAGTCGGA
TGACAAGATGGAGGAAGACAACGAGGTGTTTTGAACTAGTGGGACCTGAA
CAATGTACATATATAGAACTTTAAGATTTTTCACTTCATGTAAATAGTAT
AGATGAGAAAGAGAAAGGAACTTGCTTGAAGTCTGTTGATGTGAGGGATG
AACTACTTACTTACTATAACTATGGGCGGTGACCTTCCAGCCTCGGTTTC
CCGATCGGGGAAGGTGATTACCCAAGCAGGACTAGTGCGGGAGAGCAGCA
GCAGCTCGCATGTGAACATCTCAATTCCATTCCTTCGTGCTGAAATCAAC
AAATCACTGGGACTTTCTGCTGGTGCC back to topCoding sequence (CDS) from alignment at ch4:5943118..5945444+ >KJC3_006518-T1 ID=KJC3_006518-T1|Name=KJC3_006518-T1|organism=Aspergillus niger KJC3|type=CDS|length=4986bp|location=Sequence derived from alignment at ch4:5943118..5945444+ (Aspergillus niger KJC3)
ATGCCTCTTGAGTCCAATGAACCCCTCGACCGCGAGGATGCCCCGTTCCT
TGCCTCGGGTCAAAGGCCCTCGTCCCCTGTGGATGAAGGGGAGCCCAGTC
CGTCGGATGCACAGAAAGAACACCTTCGGAAAACTCGCTTTCGCTTAATG
TTGACCCTCTTTGCCATGATTCTGGCCGTCGAAGTTGGCATCTGCATGTC
CAACGGCCCCGTCACCCGTATATACGAGTCCATCGCCTGTCGAGAGTACT
ACGCGCAACATGATCCCACCCAGATTGGGGCTGACGGCGAGGTCCAGGAG
GAATTGTGCAAGGTTAAGGCGGTCCAGCAGGATCTGGCTGCAGTGAAGGG
CTATATGGAGTTTTTCGATGGCATTCTCAGTGCTGTGCTAGCAATTCCAT
ACGGTCTGTTGGCTGATCGACGGGGACGGAAATCCACCATTTGTCTCAGC
ATTCCCGGATTCGCCCTGAACTGCATCATTCAGCTGGTGGTGATGTGGCG
CCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCATCCTCCTTGGCTTGGT
TGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCATTATCTGGACCATGATG
TCGGATGTGTCAACCGAAGAGGAAAGAGCGGCGATATTCTTCAGGTTCGG
CGTGGCTAGCATGGGGGCCGATTTCGCCTCCAGTGCCGCCAGCTCCTGGT
TGATGTCACTAGACCCGTGGCTTCCTCTCTTACTAGGTTGGGGCTTGGCT
GTTATTGGCATGTTCTTCGCCTTATCGCTACCGGAAACAATGCGTGTAGG
ATCATCGCAGCCGACTTGGAAGCAACCGAGCATGGAGATGAGTCAGGTAT
CACCGGGAAACGCCGAGTATAAGGAAGTTCCCAGCAAGGAACAAGAACAG
GAGGTGCTTAGCGATGAAGAGACTCTTCAAGGAGAGGAAGCTTCTTTCAC
GACCAAGACAGCACGACCAACCTTCTTCGCTTCTGCGAATCAACGGTCGC
GGGCCTATTTCGCGCCCTACTCCTTCATTTTCAGGAACAAACAGATCATG
CTCCTCCTTACCGCGTTTCTTGTCTATCGACTGAGCCGTGGCTCGTCCTG
GTTTTTGGTCCAGTACATCTCCACGCGGTATAAGTGGACCCTGGCAGAAG
CGAACTTCCTCATGTCATTCAAGCCGGCCTTGACCATCCCGTTGTTCTTG
TTCATCCTACCGGCTATTTCACGACAGCTGCTCAAAACCATGAAGCCGAC
GCAGAAAGACCTGCAGCTCATGCGCATCAGTATCGGGCTGTTGGCGGTAG
GAACGTTGGGAATCGGTCTTTCTCCTAGCGTAGCCATGTTGATTCCCAGT
CTGCTCGTCCAGACATCCGGGTCTGGATTTGTCTTCCTGACTCGTGCGCT
CATTACCACCTTGGTGAATCGAGAAGAAACGGCACGTCTCTTCACCATCA
TCGAGGTTCTGCAGTCGGTGGGCAATGTCATTGCCAGTTTGTCCATTACC
ACGGTGTTCCAAATCGGGCTGGAACTCGGAGGGCCTTGGATTGGTCTGGC
CTGGATGATGACGGCGACGGCCTTCACTCTGGTAGGTGTAGCTATCTGGA
TGTTTCGGATTCCTTCTCGTCAGTCGGATGACAAGATGGAGGAAGACAAC
GAGGTGTTTTGAATGCCTCTTGAGTCCAATGAACCCCTCGACCGCGAGGA
TGCCCCGTTCCTTGCCTCGGGTCAAAGGCCCTCGTCCCCTGTGGATGAAG
GGGAGCCCAGTCCGTCGGATGCACAGAAAGAACACCTTCGGAAAACTCGC
TTTCGCTTAATGTTGACCCTCTTTGCCATGATTCTGGCCGTCGAAGTTGG
CATCTGCATGTCCAACGGCCCCGTCACCCGTATATACGAGTCCATCGCCT
GTCGAGAGTACTACGCGCAACATGATCCCACCCAGATTGGGGCTGACGGC
GAGGTCCAGGAGGAATTGTGCAAGGTTAAGGCGGTCCAGCAGGATCTGGC
TGCAGTGAAGGGCTATATGGAGTTTTTCGATGGCATTCTCAGTGCTGTGC
TAGCAATTCCATACGGTCTGTTGGCTGATCGACGGGGACGGAAATCCACC
ATTTGTCTCAGCATTCCCGGATTCGCCCTGAACTGCATCATTCAGCTGGT
GGTGATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTGTCTGGGCATCCT
CCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCTTTCGCCATTATC
TGGACCATGATGTCGGATGTGTCAACCGAAGAGGAAAGAGCGGCGATATT
CTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCGCCTCCAGTGCCG
CCAGCTCCTGGTTGATGTCACTAGACCCGTGGCTTCCTCTCTTACTAGGT
TGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCTTATCGCTACCGGAAAC
AATGCGTGTAGGATCATCGCAGCCGACTTGGAAGCAACCGAGCATGGAGA
TGAGTCAGGTATCACCGGGAAACGCCGAGTATAAGGAAGTTCCCAGCAAG
GAACAAGAACAGGAGGTGCTTAGCGATGAAGAGACTCTTCAAGGAGAGGA
AGCTTCTTTCACGACCAAGACAGCACGACCAACCTTCTTCGCTTCTGCGA
ATCAACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTCATTTTCAGGAAC
AAACAGATCATGCTCCTCCTTACCGCGTTTCTTGTCTATCGACTGAGCCG
TGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCCACGCGGTATAAGTGGA
CCCTGGCAGAAGCGAACTTCCTCATGTCATTCAAGCCGGCCTTGACCATC
CCGTTGTTCTTGTTCATCCTACCGGCTATTTCACGACAGCTGCTCAAAAC
CATGAAGCCGACGCAGAAAGACCTGCAGCTCATGCGCATCAGTATCGGGC
TGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCTAGCGTAGCCATG
TTGATTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGGATTTGTCTTCCT
GACTCGTGCGCTCATTACCACCTTGGTGAATCGAGAAGAAACGGCACGTC
TCTTCACCATCATCGAGGTTCTGCAGTCGGTGGGCAATGTCATTGCCAGT
TTGTCCATTACCACGGTGTTCCAAATCGGGCTGGAACTCGGAGGGCCTTG
GATTGGTCTGGCCTGGATGATGACGGCGACGGCCTTCACTCTGGTAGGTG
TAGCTATCTGGATGTTTCGGATTCCTTCTCGTCAGTCGGATGACAAGATG
GAGGAAGACAACGAGGTGTTTTGAATGCCTCTTGAGTCCAATGAACCCCT
CGACCGCGAGGATGCCCCGTTCCTTGCCTCGGGTCAAAGGCCCTCGTCCC
CTGTGGATGAAGGGGAGCCCAGTCCGTCGGATGCACAGAAAGAACACCTT
CGGAAAACTCGCTTTCGCTTAATGTTGACCCTCTTTGCCATGATTCTGGC
CGTCGAAGTTGGCATCTGCATGTCCAACGGCCCCGTCACCCGTATATACG
AGTCCATCGCCTGTCGAGAGTACTACGCGCAACATGATCCCACCCAGATT
GGGGCTGACGGCGAGGTCCAGGAGGAATTGTGCAAGGTTAAGGCGGTCCA
GCAGGATCTGGCTGCAGTGAAGGGCTATATGGAGTTTTTCGATGGCATTC
TCAGTGCTGTGCTAGCAATTCCATACGGTCTGTTGGCTGATCGACGGGGA
CGGAAATCCACCATTTGTCTCAGCATTCCCGGATTCGCCCTGAACTGCAT
CATTCAGCTGGTGGTGATGTGGCGCCCAGACGTCTTCCCCCTGCGAACTG
TCTGGGCATCCTCCTTGGCTTGGTTGTTTGGCGGAGGCCCTGTCGTGGCT
TTCGCCATTATCTGGACCATGATGTCGGATGTGTCAACCGAAGAGGAAAG
AGCGGCGATATTCTTCAGGTTCGGCGTGGCTAGCATGGGGGCCGATTTCG
CCTCCAGTGCCGCCAGCTCCTGGTTGATGTCACTAGACCCGTGGCTTCCT
CTCTTACTAGGTTGGGGCTTGGCTGTTATTGGCATGTTCTTCGCCTTATC
GCTACCGGAAACAATGCGTGTAGGATCATCGCAGCCGACTTGGAAGCAAC
CGAGCATGGAGATGAGTCAGGTATCACCGGGAAACGCCGAGTATAAGGAA
GTTCCCAGCAAGGAACAAGAACAGGAGGTGCTTAGCGATGAAGAGACTCT
TCAAGGAGAGGAAGCTTCTTTCACGACCAAGACAGCACGACCAACCTTCT
TCGCTTCTGCGAATCAACGGTCGCGGGCCTATTTCGCGCCCTACTCCTTC
ATTTTCAGGAACAAACAGATCATGCTCCTCCTTACCGCGTTTCTTGTCTA
TCGACTGAGCCGTGGCTCGTCCTGGTTTTTGGTCCAGTACATCTCCACGC
GGTATAAGTGGACCCTGGCAGAAGCGAACTTCCTCATGTCATTCAAGCCG
GCCTTGACCATCCCGTTGTTCTTGTTCATCCTACCGGCTATTTCACGACA
GCTGCTCAAAACCATGAAGCCGACGCAGAAAGACCTGCAGCTCATGCGCA
TCAGTATCGGGCTGTTGGCGGTAGGAACGTTGGGAATCGGTCTTTCTCCT
AGCGTAGCCATGTTGATTCCCAGTCTGCTCGTCCAGACATCCGGGTCTGG
ATTTGTCTTCCTGACTCGTGCGCTCATTACCACCTTGGTGAATCGAGAAG
AAACGGCACGTCTCTTCACCATCATCGAGGTTCTGCAGTCGGTGGGCAAT
GTCATTGCCAGTTTGTCCATTACCACGGTGTTCCAAATCGGGCTGGAACT
CGGAGGGCCTTGGATTGGTCTGGCCTGGATGATGACGGCGACGGCCTTCA
CTCTGGTAGGTGTAGCTATCTGGATGTTTCGGATTCCTTCTCGTCAGTCG
GATGACAAGATGGAGGAAGACAACGAGGTGTTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006518-T1.utr5p1 | KJC3_006518-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006518-T1.utr3p1 | KJC3_006518-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5943118..5945444 + |
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