You are here

Home

KJC3_006519-T1, KJC3_006519-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006519-T1
Unique NameKJC3_006519-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5945424..5946904+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006519-T1 ID=KJC3_006519-T1|Name=KJC3_006519-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1481bp|location=Sequence derived from alignment at ch4:5945424..5946904+ (Aspergillus niger KJC3)
CTGGGACTTTCTGCTGGTGCCGCCAACAACCCCCCGGTCTGATTTGAGTT
GGTCGCCATATCTTCTCTTTGATAAGATACTATCGGCTTTGCTCAGCAGG
TTCCCCCGCCTGCCGCGCCAACCGGACAGCTTCACACACCCCATCCTGGT
TCACAAGCTTACTGCAGTTTGCTGTCAAAGCCTGGTCATGTCCACTTTGC
AGTTTCACTAATCCCTTTAATCTCATCATCATCGAACATCTCTTGTCATG
GAGAGATTTACTCAGTTTCGCGATCGAGGTGCGTATGCAGATCCCCGACC
CTAGTCATCGTACCGGCGCTCGATTACTGACGATAATGCGCTGTGTAGGA
ACGGGTGTCTCGCCCTTCTTCCCGACTCCTCGTCCATCGCTCAGCTACCC
CCAGTGGGTTCTACGAATCTTCCTCTTCTGCGTCCGCCTTCCGCTCTTCA
TCTCCGTTTGCATCGGCTACTTCCTGCTTTTTCAATGGCTTCCAATCACA
TCGCTGGGAAGGAAGGCCGCTCTGTGGTGCATTCTAGGCGTGCCCAGCGT
CTGGTGGGTTGATCTTCAGGTGGACGGTGTGAGAAAAGGGTCAGTTGCGC
CTCTCTGCAAACTCTATGTCTATCTTGTAGAATATCTACTGAGCTCCTCG
ACTTTTAGAACCCTCAACAATGACCGGCATCAGAACCGTCTACCCGGTCC
CGGATCCATCATTGCCTCCTCCTTCACCTCTCCAATTGACGCACTCTACC
TAGCCGCCGTTTTTGACCCCATCTTCGTATCTTGCTACCCCTCCACCCGC
GAAGTTGAACAACTATCTGTCTGGCAAGCAATTATCCGCGCCTTCGCACT
CCCACAAGCAAAGCCCCCGCCCCGAGCCCGTACGGTTGACCTGAAAACCA
TCATGCGGAAGTACCCCGGTCGGCCTATTGCCCTGTTCCCAGAGTGCACG
ACCACCAACGGACAGGGCGTCTTGCCGCTAAGCCCCGTTCTGGCGAGCGC
TCCTCACAAGACGAAGATCTTCCCTGTGGCCCTGCGGTATGAGCCTAAAG
ACGTGGTGACTCCAGTACCCGGGTCGTACATGACGTTCCTGTGGAGTCTG
CTGGGTCGACCGAGACATTACATTCGGGTGCGCATTGGACAGGCAGTCGT
GGGCGTCGCTGCGGATGAACTGCCAACGCATGACGCTACCATATTTGATG
CTAGTGCTACGGAGAATGGATACCCTCATGACAGAGACGATGAACGGCCC
TTCAATGAGACCTCCGTGATGGTGCTGGAAGAGCAGGTGCCGAACTATGT
AGGGGATTCGCTGGCTCGGCTTGGCAGAGCCAGGCGTGTAGCCGTTACGG
CGCCGCAAAAGTTGGAATTTGTGAAGTTGTGGAAGAAGTCATATTGGACA
TGGTAATATGCCGTCAATCACGGCTTGCAGATAGGCAGTTGCTCATAAGT
AGATAAATATCAGTATTCTGGCGGAGCCACC
back to top

Coding sequence (CDS) from alignment at ch4:5945424..5946904+

>KJC3_006519-T1 ID=KJC3_006519-T1|Name=KJC3_006519-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch4:5945424..5946904+ (Aspergillus niger KJC3)
ATGGAGAGATTTACTCAGTTTCGCGATCGAGGAACGGGTGTCTCGCCCTT
CTTCCCGACTCCTCGTCCATCGCTCAGCTACCCCCAGTGGGTTCTACGAA
TCTTCCTCTTCTGCGTCCGCCTTCCGCTCTTCATCTCCGTTTGCATCGGC
TACTTCCTGCTTTTTCAATGGCTTCCAATCACATCGCTGGGAAGGAAGGC
CGCTCTGTGGTGCATTCTAGGCGTGCCCAGCGTCTGGTGGGTTGATCTTC
AGGTGGACGGTGTGAGAAAAGGAACCCTCAACAATGACCGGCATCAGAAC
CGTCTACCCGGTCCCGGATCCATCATTGCCTCCTCCTTCACCTCTCCAAT
TGACGCACTCTACCTAGCCGCCGTTTTTGACCCCATCTTCGTATCTTGCT
ACCCCTCCACCCGCGAAGTTGAACAACTATCTGTCTGGCAAGCAATTATC
CGCGCCTTCGCACTCCCACAAGCAAAGCCCCCGCCCCGAGCCCGTACGGT
TGACCTGAAAACCATCATGCGGAAGTACCCCGGTCGGCCTATTGCCCTGT
TCCCAGAGTGCACGACCACCAACGGACAGGGCGTCTTGCCGCTAAGCCCC
GTTCTGGCGAGCGCTCCTCACAAGACGAAGATCTTCCCTGTGGCCCTGCG
GTATGAGCCTAAAGACGTGGTGACTCCAGTACCCGGGTCGTACATGACGT
TCCTGTGGAGTCTGCTGGGTCGACCGAGACATTACATTCGGGTGCGCATT
GGACAGGCAGTCGTGGGCGTCGCTGCGGATGAACTGCCAACGCATGACGC
TACCATATTTGATGCTAGTGCTACGGAGAATGGATACCCTCATGACAGAG
ACGATGAACGGCCCTTCAATGAGACCTCCGTGATGGTGCTGGAAGAGCAG
GTGCCGAACTATGTAGGGGATTCGCTGGCTCGGCTTGGCAGAGCCAGGCG
TGTAGCCGTTACGGCGCCGCAAAAGTTGGAATTTGTGAAGTTGTGGAAGA
AGTCATATTGGACATGGTAAATGGAGAGATTTACTCAGTTTCGCGATCGA
GGAACGGGTGTCTCGCCCTTCTTCCCGACTCCTCGTCCATCGCTCAGCTA
CCCCCAGTGGGTTCTACGAATCTTCCTCTTCTGCGTCCGCCTTCCGCTCT
TCATCTCCGTTTGCATCGGCTACTTCCTGCTTTTTCAATGGCTTCCAATC
ACATCGCTGGGAAGGAAGGCCGCTCTGTGGTGCATTCTAGGCGTGCCCAG
CGTCTGGTGGGTTGATCTTCAGGTGGACGGTGTGAGAAAAGGAACCCTCA
ACAATGACCGGCATCAGAACCGTCTACCCGGTCCCGGATCCATCATTGCC
TCCTCCTTCACCTCTCCAATTGACGCACTCTACCTAGCCGCCGTTTTTGA
CCCCATCTTCGTATCTTGCTACCCCTCCACCCGCGAAGTTGAACAACTAT
CTGTCTGGCAAGCAATTATCCGCGCCTTCGCACTCCCACAAGCAAAGCCC
CCGCCCCGAGCCCGTACGGTTGACCTGAAAACCATCATGCGGAAGTACCC
CGGTCGGCCTATTGCCCTGTTCCCAGAGTGCACGACCACCAACGGACAGG
GCGTCTTGCCGCTAAGCCCCGTTCTGGCGAGCGCTCCTCACAAGACGAAG
ATCTTCCCTGTGGCCCTGCGGTATGAGCCTAAAGACGTGGTGACTCCAGT
ACCCGGGTCGTACATGACGTTCCTGTGGAGTCTGCTGGGTCGACCGAGAC
ATTACATTCGGGTGCGCATTGGACAGGCAGTCGTGGGCGTCGCTGCGGAT
GAACTGCCAACGCATGACGCTACCATATTTGATGCTAGTGCTACGGAGAA
TGGATACCCTCATGACAGAGACGATGAACGGCCCTTCAATGAGACCTCCG
TGATGGTGCTGGAAGAGCAGGTGCCGAACTATGTAGGGGATTCGCTGGCT
CGGCTTGGCAGAGCCAGGCGTGTAGCCGTTACGGCGCCGCAAAAGTTGGA
ATTTGTGAAGTTGTGGAAGAAGTCATATTGGACATGGTAAATGGAGAGAT
TTACTCAGTTTCGCGATCGAGGAACGGGTGTCTCGCCCTTCTTCCCGACT
CCTCGTCCATCGCTCAGCTACCCCCAGTGGGTTCTACGAATCTTCCTCTT
CTGCGTCCGCCTTCCGCTCTTCATCTCCGTTTGCATCGGCTACTTCCTGC
TTTTTCAATGGCTTCCAATCACATCGCTGGGAAGGAAGGCCGCTCTGTGG
TGCATTCTAGGCGTGCCCAGCGTCTGGTGGGTTGATCTTCAGGTGGACGG
TGTGAGAAAAGGAACCCTCAACAATGACCGGCATCAGAACCGTCTACCCG
GTCCCGGATCCATCATTGCCTCCTCCTTCACCTCTCCAATTGACGCACTC
TACCTAGCCGCCGTTTTTGACCCCATCTTCGTATCTTGCTACCCCTCCAC
CCGCGAAGTTGAACAACTATCTGTCTGGCAAGCAATTATCCGCGCCTTCG
CACTCCCACAAGCAAAGCCCCCGCCCCGAGCCCGTACGGTTGACCTGAAA
ACCATCATGCGGAAGTACCCCGGTCGGCCTATTGCCCTGTTCCCAGAGTG
CACGACCACCAACGGACAGGGCGTCTTGCCGCTAAGCCCCGTTCTGGCGA
GCGCTCCTCACAAGACGAAGATCTTCCCTGTGGCCCTGCGGTATGAGCCT
AAAGACGTGGTGACTCCAGTACCCGGGTCGTACATGACGTTCCTGTGGAG
TCTGCTGGGTCGACCGAGACATTACATTCGGGTGCGCATTGGACAGGCAG
TCGTGGGCGTCGCTGCGGATGAACTGCCAACGCATGACGCTACCATATTT
GATGCTAGTGCTACGGAGAATGGATACCCTCATGACAGAGACGATGAACG
GCCCTTCAATGAGACCTCCGTGATGGTGCTGGAAGAGCAGGTGCCGAACT
ATGTAGGGGATTCGCTGGCTCGGCTTGGCAGAGCCAGGCGTGTAGCCGTT
ACGGCGCCGCAAAAGTTGGAATTTGTGAAGTTGTGGAAGAAGTCATATTG
GACATGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006519KJC3_006519Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006519-T1KJC3_006519-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006519-T1.utr5p1KJC3_006519-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006519-T1.exon1KJC3_006519-T1.exon1Aspergillus niger KJC3exon
KJC3_006519-T1.exon2KJC3_006519-T1.exon2Aspergillus niger KJC3exon
KJC3_006519-T1.exon3KJC3_006519-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006519-T1.cdsKJC3_006519-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006519-T1.utr3p1KJC3_006519-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5945424..5946904 +
Powered by Drupal