You are here

KJC3_006532-T1, KJC3_006532-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006532-T1
Unique NameKJC3_006532-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5983103..5984241+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006532-T1 ID=KJC3_006532-T1|Name=KJC3_006532-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1139bp|location=Sequence derived from alignment at ch4:5983103..5984241+ (Aspergillus niger KJC3)
ATGTCACTTCGGAACCTGTTTGGCACGTTGAGGCGTTCGAGGGAGAGAAG GCAGGAGAACGATGAGACCTCCAAAGAAGCGCGGAAGGAGATTCTGAATA ACCTTCGAGAAGTGCACCGGTCTGTCAAGGCTTTTCCGCTAACCAGCCTC ACCAACGTACACGCCGCCCGGTACAACATCAGGTGCGATGACCTCACGCT GCGCACCGACGGCGGCTCCTCGGCTACGACACAGACGTATTTTAAGCCTT GGCCGTTGGAAAAGCTCGAGCAGTTTCCCCTTGATCTTGACAACCCGGAT ACCAGCAGCAACGTCCGAAGCGACGAGGCGTGCTTTGCAGAACTCGATAA AGAGAAATCGCGTGAAACGACCGCCGAGAGCGATCCAGATGGTGACGACT CTGGGCTCCTCCTGTCCAGTGTATTCCTCTGTCAATTTACATATTACGCA AGGAAGACCACGGAGGCTGGAGCTACGCTCGGTGATCTGTCGGGCTGGTT CGGAAGGTCAGTTCACCTCTGCGCACATACGCAAATCTGCCATGATAGCT GTGCATACTGACAAGCACCCACCCGCCAGGTCCTTCAATAATACCATAAT CAGGGAACGTTATATGAACATGGCCATGTTCACAGACCCAGGTAACAATC CTCTGGCCTCACCACCTCTCAGGTTTGAAGATGCTTGGTATCCGCACCGG CCACTGGGCCAGGAACTTCCTCACATAAACCTGGTCGTAACTCTTGAGGG AGTGTGCGATGATAACATCCTCCGTTCTGAACTGCTTGTTTTACTCGGCG TCATGAGGACCCGTCTTGGGAGGGTAGAGCTGAAAGACCACTCCGTGGCC CCGGTGAGTTGACTTTCCCCAGCTTCCTCTTCAATCATCCCATCTAACAA TAGACATAACCCAGGTTCTCTTGACATCATGCACAGACAATCTAAAGGCG AGGATTCTAATCGCTTACTTCAATGGTAAGAAGTTGATAGTACTGAAGAG CGCTCTCCACGATTTCTCTACTCCAGAGGCGAGGGAGAGGAACTTCCCAC TTTTCCTATTGTATATGTGCAGTCAGGCCGTGGGGGATACCAAGGCGCTG CCAGTACCGATGGCTACGGAGGAGCAGGTTACTGCTTAG
back to top

Coding sequence (CDS) from alignment at ch4:5983103..5984241+

>KJC3_006532-T1 ID=KJC3_006532-T1|Name=KJC3_006532-T1|organism=Aspergillus niger KJC3|type=CDS|length=3015bp|location=Sequence derived from alignment at ch4:5983103..5984241+ (Aspergillus niger KJC3)
ATGTCACTTCGGAACCTGTTTGGCACGTTGAGGCGTTCGAGGGAGAGAAG
GCAGGAGAACGATGAGACCTCCAAAGAAGCGCGGAAGGAGATTCTGAATA
ACCTTCGAGAAGTGCACCGGTCTGTCAAGGCTTTTCCGCTAACCAGCCTC
ACCAACGTACACGCCGCCCGGTACAACATCAGGTGCGATGACCTCACGCT
GCGCACCGACGGCGGCTCCTCGGCTACGACACAGACGTATTTTAAGCCTT
GGCCGTTGGAAAAGCTCGAGCAGTTTCCCCTTGATCTTGACAACCCGGAT
ACCAGCAGCAACGTCCGAAGCGACGAGGCGTGCTTTGCAGAACTCGATAA
AGAGAAATCGCGTGAAACGACCGCCGAGAGCGATCCAGATGGTGACGACT
CTGGGCTCCTCCTGTCCAGTGTATTCCTCTGTCAATTTACATATTACGCA
AGGAAGACCACGGAGGCTGGAGCTACGCTCGGTGATCTGTCGGGCTGGTT
CGGAAGGTCCTTCAATAATACCATAATCAGGGAACGTTATATGAACATGG
CCATGTTCACAGACCCAGGTAACAATCCTCTGGCCTCACCACCTCTCAGG
TTTGAAGATGCTTGGTATCCGCACCGGCCACTGGGCCAGGAACTTCCTCA
CATAAACCTGGTCGTAACTCTTGAGGGAGTGTGCGATGATAACATCCTCC
GTTCTGAACTGCTTGTTTTACTCGGCGTCATGAGGACCCGTCTTGGGAGG
GTAGAGCTGAAAGACCACTCCGTGGCCCCGGTTCTCTTGACATCATGCAC
AGACAATCTAAAGGCGAGGATTCTAATCGCTTACTTCAATGGTAAGAAGT
TGATAGTACTGAAGAGCGCTCTCCACGATTTCTCTACTCCAGAGGCGAGG
GAGAGGAACTTCCCACTTTTCCTATTGTATATGTGCAGTCAGGCCGTGGG
GGATACCAAGGCGCTGCCAGTACCGATGGCTACGGAGGAGCAGGTTACTG
CTTAGATGTCACTTCGGAACCTGTTTGGCACGTTGAGGCGTTCGAGGGAG
AGAAGGCAGGAGAACGATGAGACCTCCAAAGAAGCGCGGAAGGAGATTCT
GAATAACCTTCGAGAAGTGCACCGGTCTGTCAAGGCTTTTCCGCTAACCA
GCCTCACCAACGTACACGCCGCCCGGTACAACATCAGGTGCGATGACCTC
ACGCTGCGCACCGACGGCGGCTCCTCGGCTACGACACAGACGTATTTTAA
GCCTTGGCCGTTGGAAAAGCTCGAGCAGTTTCCCCTTGATCTTGACAACC
CGGATACCAGCAGCAACGTCCGAAGCGACGAGGCGTGCTTTGCAGAACTC
GATAAAGAGAAATCGCGTGAAACGACCGCCGAGAGCGATCCAGATGGTGA
CGACTCTGGGCTCCTCCTGTCCAGTGTATTCCTCTGTCAATTTACATATT
ACGCAAGGAAGACCACGGAGGCTGGAGCTACGCTCGGTGATCTGTCGGGC
TGGTTCGGAAGGTCCTTCAATAATACCATAATCAGGGAACGTTATATGAA
CATGGCCATGTTCACAGACCCAGGTAACAATCCTCTGGCCTCACCACCTC
TCAGGTTTGAAGATGCTTGGTATCCGCACCGGCCACTGGGCCAGGAACTT
CCTCACATAAACCTGGTCGTAACTCTTGAGGGAGTGTGCGATGATAACAT
CCTCCGTTCTGAACTGCTTGTTTTACTCGGCGTCATGAGGACCCGTCTTG
GGAGGGTAGAGCTGAAAGACCACTCCGTGGCCCCGGTTCTCTTGACATCA
TGCACAGACAATCTAAAGGCGAGGATTCTAATCGCTTACTTCAATGGTAA
GAAGTTGATAGTACTGAAGAGCGCTCTCCACGATTTCTCTACTCCAGAGG
CGAGGGAGAGGAACTTCCCACTTTTCCTATTGTATATGTGCAGTCAGGCC
GTGGGGGATACCAAGGCGCTGCCAGTACCGATGGCTACGGAGGAGCAGGT
TACTGCTTAGATGTCACTTCGGAACCTGTTTGGCACGTTGAGGCGTTCGA
GGGAGAGAAGGCAGGAGAACGATGAGACCTCCAAAGAAGCGCGGAAGGAG
ATTCTGAATAACCTTCGAGAAGTGCACCGGTCTGTCAAGGCTTTTCCGCT
AACCAGCCTCACCAACGTACACGCCGCCCGGTACAACATCAGGTGCGATG
ACCTCACGCTGCGCACCGACGGCGGCTCCTCGGCTACGACACAGACGTAT
TTTAAGCCTTGGCCGTTGGAAAAGCTCGAGCAGTTTCCCCTTGATCTTGA
CAACCCGGATACCAGCAGCAACGTCCGAAGCGACGAGGCGTGCTTTGCAG
AACTCGATAAAGAGAAATCGCGTGAAACGACCGCCGAGAGCGATCCAGAT
GGTGACGACTCTGGGCTCCTCCTGTCCAGTGTATTCCTCTGTCAATTTAC
ATATTACGCAAGGAAGACCACGGAGGCTGGAGCTACGCTCGGTGATCTGT
CGGGCTGGTTCGGAAGGTCCTTCAATAATACCATAATCAGGGAACGTTAT
ATGAACATGGCCATGTTCACAGACCCAGGTAACAATCCTCTGGCCTCACC
ACCTCTCAGGTTTGAAGATGCTTGGTATCCGCACCGGCCACTGGGCCAGG
AACTTCCTCACATAAACCTGGTCGTAACTCTTGAGGGAGTGTGCGATGAT
AACATCCTCCGTTCTGAACTGCTTGTTTTACTCGGCGTCATGAGGACCCG
TCTTGGGAGGGTAGAGCTGAAAGACCACTCCGTGGCCCCGGTTCTCTTGA
CATCATGCACAGACAATCTAAAGGCGAGGATTCTAATCGCTTACTTCAAT
GGTAAGAAGTTGATAGTACTGAAGAGCGCTCTCCACGATTTCTCTACTCC
AGAGGCGAGGGAGAGGAACTTCCCACTTTTCCTATTGTATATGTGCAGTC
AGGCCGTGGGGGATACCAAGGCGCTGCCAGTACCGATGGCTACGGAGGAG
CAGGTTACTGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006532KJC3_006532Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006532-T1.exon1KJC3_006532-T1.exon1Aspergillus niger KJC3exon
KJC3_006532-T1.exon2KJC3_006532-T1.exon2Aspergillus niger KJC3exon
KJC3_006532-T1.exon3KJC3_006532-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006532-T1.cdsKJC3_006532-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006532-T1KJC3_006532-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5983103..5984241 +