|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5987215..5988933- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006534-T1 ID=KJC3_006534-T1|Name=KJC3_006534-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1719bp|location=Sequence derived from alignment at ch4:5987215..5988933- (Aspergillus niger KJC3)
ATGCAGGCATACCTTCAATATCGTGCCATTCGGAATTCAGTCCGCAAACA
ATTAGACGACTTCCCTCAATGGATCCACGCTTCCATTGGCCAAGCAGGTC
CAGGAAGCTCACTGCAGCGACGCCCATCTCGACCACCCCCGATCCCAGGA
ATTAGCCTGATCGACAACCCCAATAGCCGGGAAGAGCTCTCTCATATCTT
TTTTGTCGACTGGGAAAGCAGTAAAGACCCGCTGAGTCCACGACAACTTT
CGCTCGCCACACGAGTAGCAGCAACATTGATCGTTACTAGCCTGGCATTT
GTAGTCAGCGCTTCGTCGTCGATCGAATCGGCAGTTGTGCCACAAAGCAC
CGCCGACTATGGGGTCAGTGAAGTCGTAGCCGCACTTTTCGTCGGGATAT
TCCTCCTCGGCTTCGCTACCGGATCATTAATCTCAGGACCTCTATCAGAG
ATCCTGGGCCGCAACGCTGTCTACCTAGTTTCCACATCCCTCTTCATGAT
CTTCGTCATGGGCTCCGGGCTATCCCCAAACACCGGAGCCAAGCTGGCAT
TTCGCTTCTTAGCGGGTGTATGTGGCTGTCCGCCCCTGACATGTGCTGGC
GGTACGGTGGCGGATATCTGGGATTCAAAAGAGAAGACATTGGCCTTTCC
AGTCTATGCAATTCTTTCATACGGCGGTGCCATCCTGGCCCCGGTTATTG
CATCTTACATGGGTTCGGGGTCAATCTCGTATCGCTGGACTGACTGGATT
GTGCTCATTATGGCCGGCCTTGTCTTATCCCTTATTGTTCTTGTACAACC
AGAGACATATGGTCCACTACTCCTGCGGTGGAAATCTAAGCACCTACGGC
AATTAACAGGCGATCCTCGGTACCTGTCAAAGCTGGATCTTGACCAGACT
CCACTTTTGTCTCGGATTAGACGCGCCTGCGTTCGGCAGTTCACTCTACC
AATCCGGGAGCCGATCGTCCTTGTACTCTCGTTGTATCTGACGGTGCTGT
ATATTGTACTTTTCGCCTTTTTTGTCGGGTATGCCGATATCTTCACAGAC
GTACACGGTATGTCCCAGGGACTGACAAACGTCGTTTGGGTCGCTATGTA
CGTCGGAATCCTGCTGACGGGTTTGATCGTACCATAGATATATCGAAGCC
ATCGGAAGCGAGGGCTGAAGGGAGATGGAGAGGTATCTGAAATGGCCAAT
GAAACAAACGTCTCTGAGAAACCAAGCACAATCCAACCAGAAGATAGACT
CTGGTACGCCATGATGGGTGCTCCGGCAATGACCTTGAGTCTTTTCTGGA
TGGGGTGGACGGACTATGTGAGTTGCATATGTCATCCCCAACAAGTCCCA
ATTCTTCTCCACGGTAATATACAACAGATGCTAACTTATTGCAAAATCCA
GCCATCTATCTCAGTATGGTCCCCAATCGTCGGCTCAGCGTTCTTCGGCT
TCGGTAGTATCTGCATCTTTATTTCCAGCTATATGTACATCATCGACACC
TACGAGGTCTATGCTGCATCTGCGCTGGGGTTCATGACTTCCTCGCGCTA
TTGTGTCGCTGGGGGTATGACTGTAGTCGGCGTCCCATTCTATCATAACA
TGGGGGTGCATTGGACATTGACTATTTTGGGGAGTATCAGTGCTATTTTG
ACTCCTGTGCCCTATATTCTCTGGAAGTTCGGGCCTGTGGTTCGGGGGTG
GAGTCGGTATGCTGTTTGA back to topCoding sequence (CDS) from alignment at ch4:5987215..5988933- >KJC3_006534-T1 ID=KJC3_006534-T1|Name=KJC3_006534-T1|organism=Aspergillus niger KJC3|type=CDS|length=4644bp|location=Sequence derived from alignment at ch4:5987215..5988933- (Aspergillus niger KJC3)
CCATCTATCTCAGTATGGTCCCCAATCGTCGGCTCAGCGTTCTTCGGCTT
CGGTAGTATCTGCATCTTTATTTCCAGCTATATGTACATCATCGACACCT
ACGAGGTCTATGCTGCATCTGCGCTGGGGTTCATGACTTCCTCGCGCTAT
TGTGTCGCTGGGGGTATGACTGTAGTCGGCGTCCCATTCTATCATAACAT
GGGGGTGCATTGGACATTGACTATTTTGGGGAGTATCAGTGCTATTTTGA
CTCCTGTGCCCTATATTCTCTGGAAGTTCGGGCCTGTGGTTCGGGGGTGG
AGTCGGTATGCTGTTTGAATATATCGAAGCCATCGGAAGCGAGGGCTGAA
GGGAGATGGAGAGGTATCTGAAATGGCCAATGAAACAAACGTCTCTGAGA
AACCAAGCACAATCCAACCAGAAGATAGACTCTGGTACGCCATGATGGGT
GCTCCGGCAATGACCTTGAGTCTTTTCTGGATGGGGTGGACGGACTATAT
GCAGGCATACCTTCAATATCGTGCCATTCGGAATTCAGTCCGCAAACAAT
TAGACGACTTCCCTCAATGGATCCACGCTTCCATTGGCCAAGCAGGTCCA
GGAAGCTCACTGCAGCGACGCCCATCTCGACCACCCCCGATCCCAGGAAT
TAGCCTGATCGACAACCCCAATAGCCGGGAAGAGCTCTCTCATATCTTTT
TTGTCGACTGGGAAAGCAGTAAAGACCCGCTGAGTCCACGACAACTTTCG
CTCGCCACACGAGTAGCAGCAACATTGATCGTTACTAGCCTGGCATTTGT
AGTCAGCGCTTCGTCGTCGATCGAATCGGCAGTTGTGCCACAAAGCACCG
CCGACTATGGGGTCAGTGAAGTCGTAGCCGCACTTTTCGTCGGGATATTC
CTCCTCGGCTTCGCTACCGGATCATTAATCTCAGGACCTCTATCAGAGAT
CCTGGGCCGCAACGCTGTCTACCTAGTTTCCACATCCCTCTTCATGATCT
TCGTCATGGGCTCCGGGCTATCCCCAAACACCGGAGCCAAGCTGGCATTT
CGCTTCTTAGCGGGTGTATGTGGCTGTCCGCCCCTGACATGTGCTGGCGG
TACGGTGGCGGATATCTGGGATTCAAAAGAGAAGACATTGGCCTTTCCAG
TCTATGCAATTCTTTCATACGGCGGTGCCATCCTGGCCCCGGTTATTGCA
TCTTACATGGGTTCGGGGTCAATCTCGTATCGCTGGACTGACTGGATTGT
GCTCATTATGGCCGGCCTTGTCTTATCCCTTATTGTTCTTGTACAACCAG
AGACATATGGTCCACTACTCCTGCGGTGGAAATCTAAGCACCTACGGCAA
TTAACAGGCGATCCTCGGTACCTGTCAAAGCTGGATCTTGACCAGACTCC
ACTTTTGTCTCGGATTAGACGCGCCTGCGTTCGGCAGTTCACTCTACCAA
TCCGGGAGCCGATCGTCCTTGTACTCTCGTTGTATCTGACGGTGCTGTAT
ATTGTACTTTTCGCCTTTTTTGTCGGGTATGCCGATATCTTCACAGACCC
ATCTATCTCAGTATGGTCCCCAATCGTCGGCTCAGCGTTCTTCGGCTTCG
GTAGTATCTGCATCTTTATTTCCAGCTATATGTACATCATCGACACCTAC
GAGGTCTATGCTGCATCTGCGCTGGGGTTCATGACTTCCTCGCGCTATTG
TGTCGCTGGGGGTATGACTGTAGTCGGCGTCCCATTCTATCATAACATGG
GGGTGCATTGGACATTGACTATTTTGGGGAGTATCAGTGCTATTTTGACT
CCTGTGCCCTATATTCTCTGGAAGTTCGGGCCTGTGGTTCGGGGGTGGAG
TCGGTATGCTGTTTGAATATATCGAAGCCATCGGAAGCGAGGGCTGAAGG
GAGATGGAGAGGTATCTGAAATGGCCAATGAAACAAACGTCTCTGAGAAA
CCAAGCACAATCCAACCAGAAGATAGACTCTGGTACGCCATGATGGGTGC
TCCGGCAATGACCTTGAGTCTTTTCTGGATGGGGTGGACGGACTATATGC
AGGCATACCTTCAATATCGTGCCATTCGGAATTCAGTCCGCAAACAATTA
GACGACTTCCCTCAATGGATCCACGCTTCCATTGGCCAAGCAGGTCCAGG
AAGCTCACTGCAGCGACGCCCATCTCGACCACCCCCGATCCCAGGAATTA
GCCTGATCGACAACCCCAATAGCCGGGAAGAGCTCTCTCATATCTTTTTT
GTCGACTGGGAAAGCAGTAAAGACCCGCTGAGTCCACGACAACTTTCGCT
CGCCACACGAGTAGCAGCAACATTGATCGTTACTAGCCTGGCATTTGTAG
TCAGCGCTTCGTCGTCGATCGAATCGGCAGTTGTGCCACAAAGCACCGCC
GACTATGGGGTCAGTGAAGTCGTAGCCGCACTTTTCGTCGGGATATTCCT
CCTCGGCTTCGCTACCGGATCATTAATCTCAGGACCTCTATCAGAGATCC
TGGGCCGCAACGCTGTCTACCTAGTTTCCACATCCCTCTTCATGATCTTC
GTCATGGGCTCCGGGCTATCCCCAAACACCGGAGCCAAGCTGGCATTTCG
CTTCTTAGCGGGTGTATGTGGCTGTCCGCCCCTGACATGTGCTGGCGGTA
CGGTGGCGGATATCTGGGATTCAAAAGAGAAGACATTGGCCTTTCCAGTC
TATGCAATTCTTTCATACGGCGGTGCCATCCTGGCCCCGGTTATTGCATC
TTACATGGGTTCGGGGTCAATCTCGTATCGCTGGACTGACTGGATTGTGC
TCATTATGGCCGGCCTTGTCTTATCCCTTATTGTTCTTGTACAACCAGAG
ACATATGGTCCACTACTCCTGCGGTGGAAATCTAAGCACCTACGGCAATT
AACAGGCGATCCTCGGTACCTGTCAAAGCTGGATCTTGACCAGACTCCAC
TTTTGTCTCGGATTAGACGCGCCTGCGTTCGGCAGTTCACTCTACCAATC
CGGGAGCCGATCGTCCTTGTACTCTCGTTGTATCTGACGGTGCTGTATAT
TGTACTTTTCGCCTTTTTTGTCGGGTATGCCGATATCTTCACAGACCCAT
CTATCTCAGTATGGTCCCCAATCGTCGGCTCAGCGTTCTTCGGCTTCGGT
AGTATCTGCATCTTTATTTCCAGCTATATGTACATCATCGACACCTACGA
GGTCTATGCTGCATCTGCGCTGGGGTTCATGACTTCCTCGCGCTATTGTG
TCGCTGGGGGTATGACTGTAGTCGGCGTCCCATTCTATCATAACATGGGG
GTGCATTGGACATTGACTATTTTGGGGAGTATCAGTGCTATTTTGACTCC
TGTGCCCTATATTCTCTGGAAGTTCGGGCCTGTGGTTCGGGGGTGGAGTC
GGTATGCTGTTTGAATATATCGAAGCCATCGGAAGCGAGGGCTGAAGGGA
GATGGAGAGGTATCTGAAATGGCCAATGAAACAAACGTCTCTGAGAAACC
AAGCACAATCCAACCAGAAGATAGACTCTGGTACGCCATGATGGGTGCTC
CGGCAATGACCTTGAGTCTTTTCTGGATGGGGTGGACGGACTATATGCAG
GCATACCTTCAATATCGTGCCATTCGGAATTCAGTCCGCAAACAATTAGA
CGACTTCCCTCAATGGATCCACGCTTCCATTGGCCAAGCAGGTCCAGGAA
GCTCACTGCAGCGACGCCCATCTCGACCACCCCCGATCCCAGGAATTAGC
CTGATCGACAACCCCAATAGCCGGGAAGAGCTCTCTCATATCTTTTTTGT
CGACTGGGAAAGCAGTAAAGACCCGCTGAGTCCACGACAACTTTCGCTCG
CCACACGAGTAGCAGCAACATTGATCGTTACTAGCCTGGCATTTGTAGTC
AGCGCTTCGTCGTCGATCGAATCGGCAGTTGTGCCACAAAGCACCGCCGA
CTATGGGGTCAGTGAAGTCGTAGCCGCACTTTTCGTCGGGATATTCCTCC
TCGGCTTCGCTACCGGATCATTAATCTCAGGACCTCTATCAGAGATCCTG
GGCCGCAACGCTGTCTACCTAGTTTCCACATCCCTCTTCATGATCTTCGT
CATGGGCTCCGGGCTATCCCCAAACACCGGAGCCAAGCTGGCATTTCGCT
TCTTAGCGGGTGTATGTGGCTGTCCGCCCCTGACATGTGCTGGCGGTACG
GTGGCGGATATCTGGGATTCAAAAGAGAAGACATTGGCCTTTCCAGTCTA
TGCAATTCTTTCATACGGCGGTGCCATCCTGGCCCCGGTTATTGCATCTT
ACATGGGTTCGGGGTCAATCTCGTATCGCTGGACTGACTGGATTGTGCTC
ATTATGGCCGGCCTTGTCTTATCCCTTATTGTTCTTGTACAACCAGAGAC
ATATGGTCCACTACTCCTGCGGTGGAAATCTAAGCACCTACGGCAATTAA
CAGGCGATCCTCGGTACCTGTCAAAGCTGGATCTTGACCAGACTCCACTT
TTGTCTCGGATTAGACGCGCCTGCGTTCGGCAGTTCACTCTACCAATCCG
GGAGCCGATCGTCCTTGTACTCTCGTTGTATCTGACGGTGCTGTATATTG
TACTTTTCGCCTTTTTTGTCGGGTATGCCGATATCTTCACAGAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5987215..5988933 - |
|
