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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5995987..5997727+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006538-T1 ID=KJC3_006538-T1|Name=KJC3_006538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1741bp|location=Sequence derived from alignment at ch4:5995987..5997727+ (Aspergillus niger KJC3)
GCAGGTCTTACTTTTGTTGAAGGATCGACAGAGTTATCATCAACAGAGAC
CTTGGCAGAAACGTTGACAGCAGAAAACGTACTAGCCGAAAAGCGAGCAC
CATGGCTGGAGATAAAGTTAGAGACATGCACGTTGCTATTGTCGGTGGGT
TCAATCAACATATGTCGTGACCTCATATCACTCACGATGACCGATTCTAG
GCGCCGGCATTGGAGGCCTTGCGCTCGCCATGGGCCTGTATAGACAGGGT
GTGCCATTCACGGTCTACGAAGAAGAATCTCAATATTCCACTGTTGGGTA
GGTTTTCGCTCTGCTCTCCATCGGATAGACATTCGGCTCGTCTTTCTGAC
GGGTCAAAGCGCTGGCATAGGATTTGGGACCAATGGTGACTTGGCCTTGG
ACATGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGT
AACAAGCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAG
GGAGGGTCTTGGTAAGTATCTTTTACCCTATGGTAAATTACTAAGTAGTC
TGCTGACTGTAAATCACCGCAGGGCTTACAGAGCCCTGGTACGGCAAGTC
ATCGTGGGGTCATCCGGATTACATTCGCAGAGCTGTCTGTTTTCTCTATG
TACACACTATCAAAGCTGAGCCACGCTAATGCTAACTTAGGCACATCGGA
ATGATGTCCTCCAAGCCATGACCAGCTTCATACCGATTGAGAAAGTCCGT
TTCAGCAAGCGCTTAACAAATATCGAACAGTATTCAAACAAGGTGGTCTT
ACACTTCGCGGATGGCGACACCTCGGAGGCAAGTATCCTGGTTGGTGCAG
ACGGCATCAAAAGCGTTGTGAGGAAGCATGTCCTATCACCAACGTACCCC
AGCCAGGTCGATCCAGTCTACGCTGGCTCGTACTGCTACCGCGGCGTGAT
ACCCATTTCTGAAGGCCAGGAGATCTTCGGCAACCTGACTGACGTAGCGA
AGATGTACCTCGGTGAGAAACGCTGTTGTGTTCATTATCTGATATCGGGT
GGAGAGGTATGTCCGACTTGTTTAGTAGATCAACCGCATAGCCCAGTTAC
ACTAACCTATTCCTCTTCTGGAAAACCAGGAACTCAACTTCCTCCTCTGC
GTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAAAAAGT
GACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCGACGACC
GCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGCCTCTTC
CACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCTGCTAGG
CGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGGCCAGG
GACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCTTCCTT
CATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGGTTTGC
TGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGAACGGG
CACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACGGGGGCA
GATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAGTGGTT
GTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGGAGTGG
ATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAG back to topCoding sequence (CDS) from alignment at ch4:5995987..5997727+ >KJC3_006538-T1 ID=KJC3_006538-T1|Name=KJC3_006538-T1|organism=Aspergillus niger KJC3|type=CDS|length=7992bp|location=Sequence derived from alignment at ch4:5995987..5997727+ (Aspergillus niger KJC3)
ATGGCTGGAGATAAAGTTAGAGACATGCACGTTGCTATTGTCGGCGCCGG
CATTGGAGGCCTTGCGCTCGCCATGGGCCTGTATAGACAGGGTGTGCCAT
TCACGGTCTACGAAGAAGAATCTCAATATTCCACTGTTGGCGCTGGCATA
GGATTTGGGACCAATGGTGACTTGGCCTTGGACATGATCCAAGAGGGCTT
TCTTCCTAAATTCGAGCGCTTCTGCATAGGTAACAAGCCTAAAGATGCAC
AGAATATCTACTTTGAAGGGATGCTTCTCAGGGAGGGTCTTGGGCTTACA
GAGCCCTGGTACGGCAAGTCATCGTGGGGTCATCCGGATTACATTCGCAG
AGCTGCACATCGGAATGATGTCCTCCAAGCCATGACCAGCTTCATACCGA
TTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAATATCGAACAGTATTCA
AACAAGGTGGTCTTACACTTCGCGGATGGCGACACCTCGGAGGCAAGTAT
CCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTGAGGAAGCATGTCCTAT
CACCAACGTACCCCAGCCAGGTCGATCCAGTCTACGCTGGCTCGTACTGC
TACCGCGGCGTGATACCCATTTCTGAAGGCCAGGAGATCTTCGGCAACCT
GACTGACGTAGCGAAGATGTACCTCGGTGAGAAACGCTGTTGTGTTCATT
ATCTGATATCGGGTGGAGAGGAACTCAACTTCCTCCTCTGCGTAGCGGAC
AACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAAAAAGTGACCTACGA
GACAATGATGTCCGACTTCAATGACCCGAACATCGACGACCGCTTCCGTC
GACTCCTCCACAAAGCAAAACCAATCCGATGGGGCCTCTTCCACCACCGC
TATACCTCAACATACTACCGTGATCGCGTCGTCCTGCTAGGCGATAGTGC
CCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGGCCAGGGACTGGAGG
ATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCTTCCTTCATGCTCCG
GATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGGTTTGCTGGGTATGA
TGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGAACGGGCACATGAGA
TGGCGATGATGCTTTACTATGAGCATCCGGAGACGGGGGCAGATATGCAT
AAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAGTGGTTGTGGTTTCA
TGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGGAGTGGATGAGATTA
TAGAACGGAGTGGAGGTCGGTGTAGAATTTAGATGGCTGGAGATAAAGTT
AGAGACATGCACGTTGCTATTGTCGGCGCCGGCATTGGAGGCCTTGCGCT
CGCCATGGGCCTGTATAGACAGGGTGTGCCATTCACGGTCTACGAAGAAG
AATCTCAATATTCCACTGTTGGCGCTGGCATAGGATTTGGGACCAATGGT
GACTTGGCCTTGGACATGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCG
CTTCTGCATAGGTAACAAGCCTAAAGATGCACAGAATATCTACTTTGAAG
GGATGCTTCTCAGGGAGGGTCTTGGGCTTACAGAGCCCTGGTACGGCAAG
TCATCGTGGGGTCATCCGGATTACATTCGCAGAGCTGCACATCGGAATGA
TGTCCTCCAAGCCATGACCAGCTTCATACCGATTGAGAAAGTCCGTTTCA
GCAAGCGCTTAACAAATATCGAACAGTATTCAAACAAGGTGGTCTTACAC
TTCGCGGATGGCGACACCTCGGAGGCAAGTATCCTGGTTGGTGCAGACGG
CATCAAAAGCGTTGTGAGGAAGCATGTCCTATCACCAACGTACCCCAGCC
AGGTCGATCCAGTCTACGCTGGCTCGTACTGCTACCGCGGCGTGATACCC
ATTTCTGAAGGCCAGGAGATCTTCGGCAACCTGACTGACGTAGCGAAGAT
GTACCTCGGTGAGAAACGCTGTTGTGTTCATTATCTGATATCGGGTGGAG
AGGAACTCAACTTCCTCCTCTGCGTAGCGGACAACAAGCCCTGGGAGCTG
TCCAACGCAGTCACCCAAAAAGTGACCTACGAGACAATGATGTCCGACTT
CAATGACCCGAACATCGACGACCGCTTCCGTCGACTCCTCCACAAAGCAA
AACCAATCCGATGGGGCCTCTTCCACCACCGCTATACCTCAACATACTAC
CGTGATCGCGTCGTCCTGCTAGGCGATAGTGCCCATGCTTCGCTGCCTTT
CCAGGCTGCCGGTGCTGGCCAGGGACTGGAGGATGCATTAGTCCTCTCCA
ACGTGCTCGCTAAGATCTTCCTTCATGCTCCGGATGGTGAGCTTTTGTAT
CCGTATATCTGTGCCGGGTTTGCTGGGTATGATGCCGTAAGGAGGCCTAG
GGCACAAAGACAGCTGGAACGGGCACATGAGATGGCGATGATGCTTTACT
ATGAGCATCCGGAGACGGGGGCAGATATGCATAAGGTGTTGGAGAAGTTG
CAAGCTGGGTGGTTTGAGTGGTTGTGGTTTCATGATTTGGGTAAGGATGT
ACGGGAGGCGGGGAGGGGAGTGGATGAGATTATAGAACGGAGTGGAGGTC
GGTGTAGAATTTAGATGGCTGGAGATAAAGTTAGAGACATGCACGTTGCT
ATTGTCGGCGCCGGCATTGGAGGCCTTGCGCTCGCCATGGGCCTGTATAG
ACAGGGTGTGCCATTCACGGTCTACGAAGAAGAATCTCAATATTCCACTG
TTGGCGCTGGCATAGGATTTGGGACCAATGGTGACTTGGCCTTGGACATG
ATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAACAA
GCCTAAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGGAGG
GTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCATCCG
GATTACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCATGAC
CAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAATA
TCGAACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGACACC
TCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTGAG
GAAGCATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCTACG
CTGGCTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAGGAG
ATCTTCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAAACG
CTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCCTCC
TCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAA
AAAGTGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCGA
CGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGCC
TCTTCCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCTG
CTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGG
CCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCT
TCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGG
TTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGA
ACGGGCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACGG
GGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAG
TGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGG
AGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAGATGG
CTGGAGATAAAGTTAGAGACATGCACGTTGCTATTGTCGGCGCCGGCATT
GGAGGCCTTGCGCTCGCCATGGGCCTGTATAGACAGGGTGTGCCATTCAC
GGTCTACGAAGAAGAATCTCAATATTCCACTGTTGGCGCTGGCATAGGAT
TTGGGACCAATGGTGACTTGGCCTTGGACATGATCCAAGAGGGCTTTCTT
CCTAAATTCGAGCGCTTCTGCATAGGTAACAAGCCTAAAGATGCACAGAA
TATCTACTTTGAAGGGATGCTTCTCAGGGAGGGTCTTGGGCTTACAGAGC
CCTGGTACGGCAAGTCATCGTGGGGTCATCCGGATTACATTCGCAGAGCT
GCACATCGGAATGATGTCCTCCAAGCCATGACCAGCTTCATACCGATTGA
GAAAGTCCGTTTCAGCAAGCGCTTAACAAATATCGAACAGTATTCAAACA
AGGTGGTCTTACACTTCGCGGATGGCGACACCTCGGAGGCAAGTATCCTG
GTTGGTGCAGACGGCATCAAAAGCGTTGTGAGGAAGCATGTCCTATCACC
AACGTACCCCAGCCAGGTCGATCCAGTCTACGCTGGCTCGTACTGCTACC
GCGGCGTGATACCCATTTCTGAAGGCCAGGAGATCTTCGGCAACCTGACT
GACGTAGCGAAGATGTACCTCGGTGAGAAACGCTGTTGTGTTCATTATCT
GATATCGGGTGGAGAGGAACTCAACTTCCTCCTCTGCGTAGCGGACAACA
AGCCCTGGGAGCTGTCCAACGCAGTCACCCAAAAAGTGACCTACGAGACA
ATGATGTCCGACTTCAATGACCCGAACATCGACGACCGCTTCCGTCGACT
CCTCCACAAAGCAAAACCAATCCGATGGGGCCTCTTCCACCACCGCTATA
CCTCAACATACTACCGTGATCGCGTCGTCCTGCTAGGCGATAGTGCCCAT
GCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGGCCAGGGACTGGAGGATGC
ATTAGTCCTCTCCAACGTGCTCGCTAAGATCTTCCTTCATGCTCCGGATG
GTGAGCTTTTGTATCCGTATATCTGTGCCGGGTTTGCTGGGTATGATGCC
GTAAGGAGGCCTAGGGCACAAAGACAGCTGGAACGGGCACATGAGATGGC
GATGATGCTTTACTATGAGCATCCGGAGACGGGGGCAGATATGCATAAGG
TGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAGTGGTTGTGGTTTCATGAT
TTGGGTAAGGATGTACGGGAGGCGGGGAGGGGAGTGGATGAGATTATAGA
ACGGAGTGGAGGTCGGTGTAGAATTTAGATGGCTGGAGATAAAGTTAGAG
ACATGCACGTTGCTATTGTCGGCGCCGGCATTGGAGGCCTTGCGCTCGCC
ATGGGCCTGTATAGACAGGGTGTGCCATTCACGGTCTACGAAGAAGAATC
TCAATATTCCACTGTTGGCGCTGGCATAGGATTTGGGACCAATGGTGACT
TGGCCTTGGACATGATCCAAGAGGGCTTTCTTCCTAAATTCGAGCGCTTC
TGCATAGGTAACAAGCCTAAAGATGCACAGAATATCTACTTTGAAGGGAT
GCTTCTCAGGGAGGGTCTTGGGCTTACAGAGCCCTGGTACGGCAAGTCAT
CGTGGGGTCATCCGGATTACATTCGCAGAGCTGCACATCGGAATGATGTC
CTCCAAGCCATGACCAGCTTCATACCGATTGAGAAAGTCCGTTTCAGCAA
GCGCTTAACAAATATCGAACAGTATTCAAACAAGGTGGTCTTACACTTCG
CGGATGGCGACACCTCGGAGGCAAGTATCCTGGTTGGTGCAGACGGCATC
AAAAGCGTTGTGAGGAAGCATGTCCTATCACCAACGTACCCCAGCCAGGT
CGATCCAGTCTACGCTGGCTCGTACTGCTACCGCGGCGTGATACCCATTT
CTGAAGGCCAGGAGATCTTCGGCAACCTGACTGACGTAGCGAAGATGTAC
CTCGGTGAGAAACGCTGTTGTGTTCATTATCTGATATCGGGTGGAGAGGA
ACTCAACTTCCTCCTCTGCGTAGCGGACAACAAGCCCTGGGAGCTGTCCA
ACGCAGTCACCCAAAAAGTGACCTACGAGACAATGATGTCCGACTTCAAT
GACCCGAACATCGACGACCGCTTCCGTCGACTCCTCCACAAAGCAAAACC
AATCCGATGGGGCCTCTTCCACCACCGCTATACCTCAACATACTACCGTG
ATCGCGTCGTCCTGCTAGGCGATAGTGCCCATGCTTCGCTGCCTTTCCAG
GCTGCCGGTGCTGGCCAGGGACTGGAGGATGCATTAGTCCTCTCCAACGT
GCTCGCTAAGATCTTCCTTCATGCTCCGGATGGTGAGCTTTTGTATCCGT
ATATCTGTGCCGGGTTTGCTGGGTATGATGCCGTAAGGAGGCCTAGGGCA
CAAAGACAGCTGGAACGGGCACATGAGATGGCGATGATGCTTTACTATGA
GCATCCGGAGACGGGGGCAGATATGCATAAGGTGTTGGAGAAGTTGCAAG
CTGGGTGGTTTGAGTGGTTGTGGTTTCATGATTTGGGTAAGGATGTACGG
GAGGCGGGGAGGGGAGTGGATGAGATTATAGAACGGAGTGGAGGTCGGTG
TAGAATTTAGATGGCTGGAGATAAAGTTAGAGACATGCACGTTGCTATTG
TCGGCGCCGGCATTGGAGGCCTTGCGCTCGCCATGGGCCTGTATAGACAG
GGTGTGCCATTCACGGTCTACGAAGAAGAATCTCAATATTCCACTGTTGG
CGCTGGCATAGGATTTGGGACCAATGGTGACTTGGCCTTGGACATGATCC
AAGAGGGCTTTCTTCCTAAATTCGAGCGCTTCTGCATAGGTAACAAGCCT
AAAGATGCACAGAATATCTACTTTGAAGGGATGCTTCTCAGGGAGGGTCT
TGGGCTTACAGAGCCCTGGTACGGCAAGTCATCGTGGGGTCATCCGGATT
ACATTCGCAGAGCTGCACATCGGAATGATGTCCTCCAAGCCATGACCAGC
TTCATACCGATTGAGAAAGTCCGTTTCAGCAAGCGCTTAACAAATATCGA
ACAGTATTCAAACAAGGTGGTCTTACACTTCGCGGATGGCGACACCTCGG
AGGCAAGTATCCTGGTTGGTGCAGACGGCATCAAAAGCGTTGTGAGGAAG
CATGTCCTATCACCAACGTACCCCAGCCAGGTCGATCCAGTCTACGCTGG
CTCGTACTGCTACCGCGGCGTGATACCCATTTCTGAAGGCCAGGAGATCT
TCGGCAACCTGACTGACGTAGCGAAGATGTACCTCGGTGAGAAACGCTGT
TGTGTTCATTATCTGATATCGGGTGGAGAGGAACTCAACTTCCTCCTCTG
CGTAGCGGACAACAAGCCCTGGGAGCTGTCCAACGCAGTCACCCAAAAAG
TGACCTACGAGACAATGATGTCCGACTTCAATGACCCGAACATCGACGAC
CGCTTCCGTCGACTCCTCCACAAAGCAAAACCAATCCGATGGGGCCTCTT
CCACCACCGCTATACCTCAACATACTACCGTGATCGCGTCGTCCTGCTAG
GCGATAGTGCCCATGCTTCGCTGCCTTTCCAGGCTGCCGGTGCTGGCCAG
GGACTGGAGGATGCATTAGTCCTCTCCAACGTGCTCGCTAAGATCTTCCT
TCATGCTCCGGATGGTGAGCTTTTGTATCCGTATATCTGTGCCGGGTTTG
CTGGGTATGATGCCGTAAGGAGGCCTAGGGCACAAAGACAGCTGGAACGG
GCACATGAGATGGCGATGATGCTTTACTATGAGCATCCGGAGACGGGGGC
AGATATGCATAAGGTGTTGGAGAAGTTGCAAGCTGGGTGGTTTGAGTGGT
TGTGGTTTCATGATTTGGGTAAGGATGTACGGGAGGCGGGGAGGGGAGTG
GATGAGATTATAGAACGGAGTGGAGGTCGGTGTAGAATTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006538-T1.utr5p1 | KJC3_006538-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5995987..5997727 + |
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