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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6014835..6015802- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006548-T1 ID=KJC3_006548-T1|Name=KJC3_006548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=968bp|location=Sequence derived from alignment at ch4:6014835..6015802- (Aspergillus niger KJC3)
ATGCAATCAAAATATTACTGTATCGGTGCAGGATTCTGCGGGACAGTCTG
GACCCTCGCTGAAGTTGGTCTAGCCATCAAGCGAGAGGATGGCGGTCCAG
ACAGGTCCCTCGCTAATGATTATGCTATGAACCAGCGAGTTCTTCGGTGT
CTCTCGCGACTGACAGACATCAAAAGTCGAAGATCCATTAACTACCAGGC
ATTTCCCCAAGTTCGGGTCTCACAGTGCCATCGCTTCATCCCCCCAAGCG
ATCGGTGGTGGTCGGAAAATCTTCCTCTCTTTCCATCGCAACACTCACCC
TGCAATGCCATCGTCTCATACCGCATCCCCCCATTTCCTGAGCAGACTAG
AGACCTCATTGTCAACAAATACTTCAATCCAAAGATACAAATGGAGATAC
TGACAACCGCAGCCAATAGAGACTGTCTGATACGGCCGTATCTGGGTAGG
CGACGGACGCAGAGGACCGGAATCAGCAGACCCTCGAGATCTGCGACTTT
CTCACTGCGAAACTACCCATACATGAAGACCAGATGGAAGACATTGGTAT
CTCGATCGAAAACATGCAGAAATATGCGCGAATGATGGGTGAAGCATTAG
CAACTCTACACTGGCTCGGCGAGATGGACGGAAATGATATTGAATTTGTC
CTGGCTCCTCTCCCTTTCGATGAACAACAACCCAACACCGACCTAATCAC
CGATGTCCTCGGTCAGCATACTATGTGGATGCTGGACTTCGATTTATGTC
AGCCTATGCCCATGAGCGATGATGGGGTCCAGCAGGCTGTTACTGCTTTT
TGGCGCAATGATCCCTTCTATCCCCGACCGCAGAGAGAGCTGTGGGATGT
ATTTCGCGAGCAATACTTGATAACTAGCGAGACCATCATTTCTGGGTATA
ATCAGGTCGATATTGATCAGCGACTGTCGCTTGCTCGAAGATTTATTGAA
TTGATTGAGACAAACTAG back to topCoding sequence (CDS) from alignment at ch4:6014835..6015802- >KJC3_006548-T1 ID=KJC3_006548-T1|Name=KJC3_006548-T1|organism=Aspergillus niger KJC3|type=CDS|length=1758bp|location=Sequence derived from alignment at ch4:6014835..6015802- (Aspergillus niger KJC3)
GCGACGGACGCAGAGGACCGGAATCAGCAGACCCTCGAGATCTGCGACTT
TCTCACTGCGAAACTACCCATACATGAAGACCAGATGGAAGACATTGGTA
TCTCGATCGAAAACATGCAGAAATATGCGCGAATGATGGGTGAAGCATTA
GCAACTCTACACTGGCTCGGCGAGATGGACGGAAATGATATTGAATTTGT
CCTGGCTCCTCTCCCTTTCGATGAACAACAACCCAACACCGACCTAATCA
CCGATGTCCTCGGTCAGCATACTATGTGGATGCTGGACTTCGATTTATGT
CAGCCTATGCCCATGAGCGATGATGGGGTCCAGCAGGCTGTTACTGCTTT
TTGGCGCAATGATCCCTTCTATCCCCGACCGCAGAGAGAGCTGTGGGATG
TATTTCGCGAGCAATACTTGATAACTAGCGAGACCATCATTTCTGGGTAT
AATCAGGTCGATATTGATCAGCGACTGTCGCTTGCTCGAAGATTTATTGA
ATTGATTGAGACAAACTAGATGCAATCAAAATATTACTGTATCGGTGCAG
GATTCTGCGGGACAGTCTGGACCCTCGCTGAAGTTGGTCTAGCCATCAAG
CGAGAGGATGGCGGTCCAGACAGGTCCCTCGCTAATGATTATGCTATGAA
CCAGCGAGTTCTTCGGTGTCTCTCGCGACTGACAGACATCAAAAGTCGAA
GATCCATTAACTACCAGGCATTTCCCCAAGTTCGGGTCTCACAGTGCCAT
CGCTTCATCCCCCCAAGCGATCGGTGGTGGTCGGAAAATCTTCCTCTCTT
TCCATCGCAACACTCACCCTGCAATGCCATCGTCTCATACCGCATCCCCC
CATTTCCTGAGCAGACTAGAGACCTCATTGCGACGGACGCAGAGGACCGG
AATCAGCAGACCCTCGAGATCTGCGACTTTCTCACTGCGAAACTACCCAT
ACATGAAGACCAGATGGAAGACATTGGTATCTCGATCGAAAACATGCAGA
AATATGCGCGAATGATGGGTGAAGCATTAGCAACTCTACACTGGCTCGGC
GAGATGGACGGAAATGATATTGAATTTGTCCTGGCTCCTCTCCCTTTCGA
TGAACAACAACCCAACACCGACCTAATCACCGATGTCCTCGGTCAGCATA
CTATGTGGATGCTGGACTTCGATTTATGTCAGCCTATGCCCATGAGCGAT
GATGGGGTCCAGCAGGCTGTTACTGCTTTTTGGCGCAATGATCCCTTCTA
TCCCCGACCGCAGAGAGAGCTGTGGGATGTATTTCGCGAGCAATACTTGA
TAACTAGCGAGACCATCATTTCTGGGTATAATCAGGTCGATATTGATCAG
CGACTGTCGCTTGCTCGAAGATTTATTGAATTGATTGAGACAAACTAGAT
GCAATCAAAATATTACTGTATCGGTGCAGGATTCTGCGGGACAGTCTGGA
CCCTCGCTGAAGTTGGTCTAGCCATCAAGCGAGAGGATGGCGGTCCAGAC
AGGTCCCTCGCTAATGATTATGCTATGAACCAGCGAGTTCTTCGGTGTCT
CTCGCGACTGACAGACATCAAAAGTCGAAGATCCATTAACTACCAGGCAT
TTCCCCAAGTTCGGGTCTCACAGTGCCATCGCTTCATCCCCCCAAGCGAT
CGGTGGTGGTCGGAAAATCTTCCTCTCTTTCCATCGCAACACTCACCCTG
CAATGCCATCGTCTCATACCGCATCCCCCCATTTCCTGAGCAGACTAGAG
ACCTCATT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.12 |
| DBxref | InterPro:IPR022137 |
| DBxref | PFAM:PF12417 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6014835..6015802 - |
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