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KJC3_006552-T2, KJC3_006552-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006552-T2
Unique NameKJC3_006552-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6018238..6019361-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006552-T2 ID=KJC3_006552-T2|Name=KJC3_006552-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1124bp|location=Sequence derived from alignment at ch4:6018238..6019361- (Aspergillus niger KJC3)
CTACCAGAACTCCTTGGGATCTCCAAATAAACACACCAAGATGAGCACGA
TTGCTGTGGCCGGTGGAACTGGCGGCATAGGGAAGACCATAGTCGAGGCG
TTGCTGCAGGAGCCCAAGTATCGGGTCATTGTCTTGACTCAAAGTGTACG
ACCCCATTGACGATGCTTCGCGCGCACTAACTCATCGAAAGTCAAGAGCC
CCAAGAAGGATCCCGTTCTCGGGCGGACGCAGCAAATTCAGATCAATTAT
GATGATGTTGACTCTATTGTCCAAACGCTGGAGAAGCATGCGATACACAC
AATCATCTCCGCTATCGGAATCTACACGGAGGAAGCCAACCAATCCCAGA
TGAACCTAGTCCAGGCTGCCGAGAGGTCTAGTGTTACGAAAAGATTTGTG
CCCAGCGAATATTCATTTATTCAAACCGAGGAGTATGTTCACCCTACTTG
GTACTTACTAATGGCAAGTTTGCTAATGAAACAGTCTCCTACCCCACGAT
CCCAGCATTAAGTACTGGCTTGATGTAGCTGAAATGCTGAAGAAAACCAA
GTTGCAGTATACTCGGGTCTGCCCCGGCGTCCTCATGGACTACTGGGGGA
TGCCTCGAGTGCGAACCAACATCCATCAACACGTTATCGGGATCGATGTA
GCCAATTGCTGGGCCGGTATTCCCGGCGATGGCAATGACAAAATGAGCGT
GACGTACTCATACGACCTGGCAGCATATATCGTGAAGCTGCTTGATCTTG
ACGAGTGGCCTGAATTCAGCGTCTTTGCAGGAGATGATGTTACCTACAAC
GAGCTTCTTAAGCTTGCTGAGGAGGCCAGAGGTATGTATTTCGAGCATCT
ACAAAGGAATTTGACTAACTTGACCAGGCAAAAAATTCGACGTTATCTAC
GACAGTGCCGAGAAGATTAAAGAAGGCCAGGTCACAGTGCCACCGTTTCT
CACCGGATATTCTGAGGCGGAGGCTCTAGAGATGACCGTGCTGGTGAGCC
GACTCACCATTGCCGGCGCTTTCGATCTACCAAAGGAGCGTATGAATTCT
ATGTTTCCCGATATTAAGCCCATCAAGATGAGGGAGTTTCTCATTAATAC
ATGGAAGGATGAGGCATAATCATG
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Coding sequence (CDS) from alignment at ch4:6018238..6019361-

>KJC3_006552-T2 ID=KJC3_006552-T2|Name=KJC3_006552-T2|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch4:6018238..6019361- (Aspergillus niger KJC3)
GCAAAAAATTCGACGTTATCTACGACAGTGCCGAGAAGATTAAAGAAGGC
CAGGTCACAGTGCCACCGTTTCTCACCGGATATTCTGAGGCGGAGGCTCT
AGAGATGACCGTGCTGGTGAGCCGACTCACCATTGCCGGCGCTTTCGATC
TACCAAAGGAGCGTATGAATTCTATGTTTCCCGATATTAAGCCCATCAAG
ATGAGGGAGTTTCTCATTAATACATGGAAGGATGAGGCATAATCTCCTAC
CCCACGATCCCAGCATTAAGTACTGGCTTGATGTAGCTGAAATGCTGAAG
AAAACCAAGTTGCAGTATACTCGGGTCTGCCCCGGCGTCCTCATGGACTA
CTGGGGGATGCCTCGAGTGCGAACCAACATCCATCAACACGTTATCGGGA
TCGATGTAGCCAATTGCTGGGCCGGTATTCCCGGCGATGGCAATGACAAA
ATGAGCGTGACGTACTCATACGACCTGGCAGCATATATCGTGAAGCTGCT
TGATCTTGACGAGTGGCCTGAATTCAGCGTCTTTGCAGGAGATGATGTTA
CCTACAACGAGCTTCTTAAGCTTGCTGAGGAGGCCAGAGATGAACCTAGT
CCAGGCTGCCGAGAGGTCTAGTGTTACGAAAAGATTTGTGCCCAGCGAAT
ATTCATTTATTCAAACCGAGGAGCAAAAAATTCGACGTTATCTACGACAG
TGCCGAGAAGATTAAAGAAGGCCAGGTCACAGTGCCACCGTTTCTCACCG
GATATTCTGAGGCGGAGGCTCTAGAGATGACCGTGCTGGTGAGCCGACTC
ACCATTGCCGGCGCTTTCGATCTACCAAAGGAGCGTATGAATTCTATGTT
TCCCGATATTAAGCCCATCAAGATGAGGGAGTTTCTCATTAATACATGGA
AGGATGAGGCATAATCTCCTACCCCACGATCCCAGCATTAAGTACTGGCT
TGATGTAGCTGAAATGCTGAAGAAAACCAAGTTGCAGTATACTCGGGTCT
GCCCCGGCGTCCTCATGGACTACTGGGGGATGCCTCGAGTGCGAACCAAC
ATCCATCAACACGTTATCGGGATCGATGTAGCCAATTGCTGGGCCGGTAT
TCCCGGCGATGGCAATGACAAAATGAGCGTGACGTACTCATACGACCTGG
CAGCATATATCGTGAAGCTGCTTGATCTTGACGAGTGGCCTGAATTCAGC
GTCTTTGCAGGAGATGATGTTACCTACAACGAGCTTCTTAAGCTTGCTGA
GGAGGCCAGAGATGAACCTAGTCCAGGCTGCCGAGAGGTCTAGTGTTACG
AAAAGATTTGTGCCCAGCGAATATTCATTTATTCAAACCGAGGAGCAAAA
AATTCGACGTTATCTACGACAGTGCCGAGAAGATTAAAGAAGGCCAGGTC
ACAGTGCCACCGTTTCTCACCGGATATTCTGAGGCGGAGGCTCTAGAGAT
GACCGTGCTGGTGAGCCGACTCACCATTGCCGGCGCTTTCGATCTACCAA
AGGAGCGTATGAATTCTATGTTTCCCGATATTAAGCCCATCAAGATGAGG
GAGTTTCTCATTAATACATGGAAGGATGAGGCATAATCTCCTACCCCACG
ATCCCAGCATTAAGTACTGGCTTGATGTAGCTGAAATGCTGAAGAAAACC
AAGTTGCAGTATACTCGGGTCTGCCCCGGCGTCCTCATGGACTACTGGGG
GATGCCTCGAGTGCGAACCAACATCCATCAACACGTTATCGGGATCGATG
TAGCCAATTGCTGGGCCGGTATTCCCGGCGATGGCAATGACAAAATGAGC
GTGACGTACTCATACGACCTGGCAGCATATATCGTGAAGCTGCTTGATCT
TGACGAGTGGCCTGAATTCAGCGTCTTTGCAGGAGATGATGTTACCTACA
ACGAGCTTCTTAAGCTTGCTGAGGAGGCCAGAGATGAACCTAGTCCAGGC
TGCCGAGAGGTCTAGTGTTACGAAAAGATTTGTGCCCAGCGAATATTCAT
TTATTCAAACCGAGGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006552KJC3_006552Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006552-T2KJC3_006552-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006552-T2.cdsKJC3_006552-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006552-T2.utr3p1KJC3_006552-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006552-T2.exon4KJC3_006552-T2.exon4Aspergillus niger KJC3exon
KJC3_006552-T2.exon3KJC3_006552-T2.exon3Aspergillus niger KJC3exon
KJC3_006552-T2.exon2KJC3_006552-T2.exon2Aspergillus niger KJC3exon
KJC3_006552-T2.exon1KJC3_006552-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006552-T2.utr5p2KJC3_006552-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006552-T2.utr5p1KJC3_006552-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_4.12
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6018238..6019361 -
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