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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6026531..6030082+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006556-T1 ID=KJC3_006556-T1|Name=KJC3_006556-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3552bp|location=Sequence derived from alignment at ch4:6026531..6030082+ (Aspergillus niger KJC3)
GGCGGATGAGACGATGATCAAAATTTTTGATTAGTGAACAGCCCGAGCCG
AGGCATCTTTCCCGTCTCCCTTTTGCTCAACCAGCACACACACCCAAGCA
CATCATCCACTTAGTGTCTGAGATATTCATGCATAACGTAAAGTTTCTAA
GCTGTTGATAACCTTACTTTATGCTATCCACCCCAACAAAGAATAAATGG
ACCCGGTCTGGACGGGTTGGATGCAGTGACGTGTGGCGACAGGACGGCAG
GCACAGGATATGTCAGCAGCACTTCTGTCTTTGACTTTTCTCTGCACCAC
CTCCACCAGCTCTTCCGTACAAACAAACCATCAGGGTGAATGATGATAAA
ATATTTTGTCTATTCTCAAAAATGAATATGAGCGACTCAGACACGGCTCT
ACTCCCCTGGGAGACTGTCAACGATGAGTTTTTTGGATCTCAGTGTGACT
CGACCGCCCCGCAGATAACATCGCTGCTCTCGGCTTGCTCGTATCCCGTG
CCCCAACAGATCAGGAGACAACGAAATGCCCAATTCCCACTTCTTGGTGG
AATCATACCGGAAAACCAACTGCTTCTTTACAATAACGACACCCAACCGG
CTGAACCGGCAGTAAAGTCTCTGAAACGCACTCGCAGTGACGTAGATAAG
CGCGGCTCAACATCACTCACAAAAAGGGGTCGACCGCGAAAAGTAGTCGA
TGACACCGCAGATGAAGATCCAGAAGAGGTATGCGAGACTCTGTTCGTTT
GTGCGCTACTACCGGGACATTGATCAACTCGAGCAGAGACGTCGGAGACA
GATCCGACTTGCGCAACGCGCATATCGCTCACGAAAAGAGGCCAACCTCT
CGTCTTTGAAAGGTCGCATCTCCGAACTCGAAGGCATCGTGGAAAAAATG
AGTACGGCTGTTTTATCGCTCAGTGACGAGCTGGTCCAGTCAGGAGTGCT
GGCATCACATGCGGGTCTGACGGAGCATTTGCGCGATACCGTACAGACAT
GTCTCACCCTAGCCAGAGAGGCTAGCAATGATAGCCCCCAGGAGGTTACG
ATGATTTCGCCACCCCAAACCGAAGATGGCTTGCCAGATTTTCTGGCGCA
TGAACAGCACAGACAATCAGCACAGATTGTGGAACTGGACGAGAGCGTTT
CCCCCATCTTAGAGCCTAGTCTACAGCTGGAGCTTAGGCAGACGCGGAAC
AGAAACATTCCTCGCTTCTTCGAGTCACTTGAAACAGCCGAAATGGACTT
GACTGTGTTCACAGATAGACTCCACATGTCATGTGTCTATCAAGGGTGTT
TCGCCCTTTGTGACGAATCCATCAGTATAGACCGGATACGGAAGCATTTC
TGCCTACTACTTCAGATTATGGACAGGAATCGTATCGCGTCATATTTTCA
AGCCGCGCTCAATGAGAAAGAGAGTCGGAGATATTTTGAGGAGTGGGAAG
AGGTACCCTTCTTCAGTCTGGGGGGCGCAGGAACCCATTACTCTCGATCT
TCCCTGAAGTGTAAAGCAGCTGATCGTCCATTCCGGCTTGGAGTGCGGTG
GGTTTCTGTGCGATCACTATCCCACTTTCCGCAAGATATACAGACCAAGC
TTGAAGGGGACTGGTTCGACATGGGTGACCTGGAAGGATACCTGCGGGAG
CATGATGTACATCTTCTCGCATATCCTCCCATGGATCACGCGCGCCATCG
CCTCAAGGGAACCGCGATTAATGCAGCACGTTTCATACAGGGTATGGCCT
TCTAAATTCTGCTCCTTGCTTTTCGGTCATAAATACTCACTTATTGGTAG
CACTGTCCGCAAATGCAATATGCCTTGGTTGGACGCCGGGTTTCCGTCGC
CGTGACGTGGAGAACGCTCTCCAGACCTGTGTATGGAGATGAGGTAATGG
CTGCATTTTACGAGAATGTGGCTTACATTACTACCATGATTTATGAACAT
AGCTAGTCTGATTTTTCATACACCTCGGAGGATGCCTCTGGGTCACCGGA
CATCTCTTTTGCGGGCTTTAGCGAGCGACTCGCAAGACAGACCATTGAAG
CATAAGGAAGAATGGCGAAGAGGGATAGCCATATCTGTATCCCTGATCAG
CGAGCATGCTGTTAACCCTTGCAGGAAGGATAGCTGCTTAGTTGCTTTAG
CTCACTGTCATGCTCCTGAGAATTTCATTGTGGGAACTATGGCCACACCT
TTCTTTATTACCACAGTGATGGGCATGGGTAATACTATTCTTCCTTACCT
AAATCCCTACGCTTGGTCAGGAAGTCATTCAGGATCTACAGCCCACCTGC
CATCCATCACTGCTAGGGCCATTCCCATTTAAAACCAGTGCTGATAATTT
CACGAATAACGACTGTGCCTGACCTACCAGCCTGCGAATTACACCTGACG
TAATGTCAACTACGTGGTCACCGTACTCCTTCAGCCGCACCGACGGTCGC
TTTACAACAAGGGTTTGTGTCTGCTAGCACAAACAGCAAATGCTGACTTT
GGAATCAACCTACTCCGACCGGGACCAATATCGGATGGTGTACTACATGC
TAGTATGCAAAGCTTCGTACTCACGGTTCATGGCTCGGGATCTTCTCTAC
TTTTCCGCCAACCTAAGGCGCTATGACCCAAGTCCCATGCACTTGTATAA
TACGTGCGTGAGTTCCCGAGACCCATTTCCAACCATGCAGCCATATTTAT
AAATATCACGGAGGAAGTATTTCCGTGACCAGGTTCCTCTGGCCATGCTC
AAGTCTTTCATAGAGGGACGCGCTGCTGTGGAGACAAGTACCAGACAGAT
GGGGCCCGGCGACGGGGCAGATGACATGACCATGCAAATTTAGAGGCACA
TCGAACATTTTTTTTTCCCCTCGAGGGTATGCACGTGCGGCTAAGTGTGT
GGAAGAGTTCATGGAGCCTATGGCAACTGGCAACACACCTGGCCCTACAT
GTCCATCACTTGCTGTTTAGACTAGGAAAGAAAATTCGACGAGGTTTGGA
GCTCCAGCTGCTCAGATTGTGCTATAGATGTAAGGACCGACAGATAAAGG
TGATATAAGCGATATTCCACAAGAAAAAGAAAATTTGTATATCTCCAAGG
AGGCTTCTTGGCATTTCCTTCTAGCCAGGTTCCTCTAGCAATGAACGGAA
GAGAATACTGCGAAGATTCAGTTTGTGCGACGGAAATTGGTTGAAATGAC
AACGAAAGCCAGTTACGCAAGGGTTTGTGAGGCTGACCTGGCTCTACAGA
CCTGATCTTGAGATATACGTAAGCCTATATTTCGTCACACATTTTCCTGG
TGAATGCTTAGGCGGCGGACAAGACACCGCGCGGACATTGCATCGGAGGG
CTTGTGTTCACCACCAACCGACCCATGGAAGTAGTATCGCGGGTTATGGG
GAAGGCCACGGCTCAACCATTCGCGTGGAATCTGTACGTAGCGCATACAA
CGGCACAAACTTGGAAATAAAGTCGTCGTCGCCAGGGGGGGCTCAGCCCA
TGCCGATGGGCTTTGCCATTCCAGCCACAGGAGAGGCGCGCGATCCCGTG
GC back to topCoding sequence (CDS) from alignment at ch4:6026531..6030082+ >KJC3_006556-T1 ID=KJC3_006556-T1|Name=KJC3_006556-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch4:6026531..6030082+ (Aspergillus niger KJC3)
ATGACACCGCAGATGAAGATCCAGAAGAGGTATGCGAGACTCTGTTCGTT
TGTGCGCTACTACCGGGACATTGATCAACTCGAGCAGAGACGTCGGAGAC
AGATCCGACTTGCGCAACGCGCATATCGCTCACGAAAAGAGGCCAACCTC
TCGTCTTTGAAAGGTCGCATCTCCGAACTCGAAGGCATCGTGGAAAAAAT
GAGTACGGCTGTTTTATCGCTCAGTGACGAGCTGGTCCAGTCAGGAGTGC
TGGCATCACATGCGGGTCTGACGGAGCATTTGCGCGATACCGTACAGACA
TGTCTCACCCTAGCCAGAGAGGCTAGCAATGATAGCCCCCAGGAGGTTAC
GATGATTTCGCCACCCCAAACCGAAGATGGCTTGCCAGATTTTCTGGCGC
ATGAACAGCACAGACAATCAGCACAGATTGTGGAACTGGACGAGAGCGTT
TCCCCCATCTTAGAGCCTAGTCTACAGCTGGAGCTTAGGCAGACGCGGAA
CAGAAACATTCCTCGCTTCTTCGAGTCACTTGAAACAGCCGAAATGGACT
TGACTGTGTTCACAGATAGACTCCACATGTCATGTGTCTATCAAGGGTGT
TTCGCCCTTTGTGACGAATCCATCAGTATAGACCGGATACGGAAGCATTT
CTGCCTACTACTTCAGATTATGGACAGGAATCGTATCGCGTCATATTTTC
AAGCCGCGCTCAATGAGAAAGAGAGTCGGAGATATTTTGAGGAGTGGGAA
GAGGTACCCTTCTTCAGTCTGGGGGGCGCAGGAACCCATTACTCTCGATC
TTCCCTGAAGTGTAAAGCAGCTGATCGTCCATTCCGGCTTGGAGTGCGGT
GGGTTTCTGTGCGATCACTATCCCACTTTCCGCAAGATATACAGACCAAG
CTTGAAGGGGACTGGTTCGACATGGGTGACCTGGAAGGATACCTGCGGGA
GCATGATGTACATCTTCTCGCATATCCTCCCATGGATCACGCGCGCCATC
GCCTCAAGGGAACCGCGATTAATGCAGCACGTTTCATACAGGCACTGTCC
GCAAATGCAATATGCCTTGGTTGGACGCCGGGTTTCCGTCGCCGTGACGT
GGAGAACGCTCTCCAGACCTGTGTATGGAGATGAATGACACCGCAGATGA
AGATCCAGAAGAGGTATGCGAGACTCTGTTCGTTTGTGCGCTACTACCGG
GACATTGATCAACTCGAGCAGAGACGTCGGAGACAGATCCGACTTGCGCA
ACGCGCATATCGCTCACGAAAAGAGGCCAACCTCTCGTCTTTGAAAGGTC
GCATCTCCGAACTCGAAGGCATCGTGGAAAAAATGAGTACGGCTGTTTTA
TCGCTCAGTGACGAGCTGGTCCAGTCAGGAGTGCTGGCATCACATGCGGG
TCTGACGGAGCATTTGCGCGATACCGTACAGACATGTCTCACCCTAGCCA
GAGAGGCTAGCAATGATAGCCCCCAGGAGGTTACGATGATTTCGCCACCC
CAAACCGAAGATGGCTTGCCAGATTTTCTGGCGCATGAACAGCACAGACA
ATCAGCACAGATTGTGGAACTGGACGAGAGCGTTTCCCCCATCTTAGAGC
CTAGTCTACAGCTGGAGCTTAGGCAGACGCGGAACAGAAACATTCCTCGC
TTCTTCGAGTCACTTGAAACAGCCGAAATGGACTTGACTGTGTTCACAGA
TAGACTCCACATGTCATGTGTCTATCAAGGGTGTTTCGCCCTTTGTGACG
AATCCATCAGTATAGACCGGATACGGAAGCATTTCTGCCTACTACTTCAG
ATTATGGACAGGAATCGTATCGCGTCATATTTTCAAGCCGCGCTCAATGA
GAAAGAGAGTCGGAGATATTTTGAGGAGTGGGAAGAGGTACCCTTCTTCA
GTCTGGGGGGCGCAGGAACCCATTACTCTCGATCTTCCCTGAAGTGTAAA
GCAGCTGATCGTCCATTCCGGCTTGGAGTGCGGTGGGTTTCTGTGCGATC
ACTATCCCACTTTCCGCAAGATATACAGACCAAGCTTGAAGGGGACTGGT
TCGACATGGGTGACCTGGAAGGATACCTGCGGGAGCATGATGTACATCTT
CTCGCATATCCTCCCATGGATCACGCGCGCCATCGCCTCAAGGGAACCGC
GATTAATGCAGCACGTTTCATACAGGCACTGTCCGCAAATGCAATATGCC
TTGGTTGGACGCCGGGTTTCCGTCGCCGTGACGTGGAGAACGCTCTCCAG
ACCTGTGTATGGAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006556-T1.utr5p1 | KJC3_006556-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.12 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6026531..6030082 + |
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