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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6055930..6058034+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006564-T1 ID=KJC3_006564-T1|Name=KJC3_006564-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2105bp|location=Sequence derived from alignment at ch4:6055930..6058034+ (Aspergillus niger KJC3)
CCCCCGGTGCTAGCCACTCTCTCCCCATTCTGCACGGCATGTTCTTCTTC
GAATCCTTCCTCCTCGGCTATCCGGCTCCCGTTGCCAAGGGCTTCTAGTC
TGCTGCCCGGTGTATCTCCACCACCACCACCACCACCGCCAGGCACGTCA
GCTCACAGGCTAGCTAGCTCTCCACTCCGGCTGGGCCGCAGTTAAAGCTC
ACTCTTCCCCTCCATCTTGCTTTTCTTTCTCTCCGCAGTGCCATTGTCAA
GAAGCATACACCATGCGCATCGCCTCCCTCCTCCCTTTGACGGCGGCCGC
CACTACGGTTGCCGCCAAGGCCACCTCGGCCGGCTGCAAGGCCCTCAACA
AGTCCCTGTCCAGCGCGGTGTTTGCGCCCAGCTCCACTGTCTACCAGTAT
GAGGCGCAGAACTTCTGGTCCAATACGGAGATCATGTCTCCTGGCTGTGT
ATTCCGGCCCCAGTCGGCTGAGGAATTGAGCCAGGGTGTCAAGGCGCTGG
TGGACGCCGAGGCGCAGTTTGCTGTGCGCGGTGGAGGACATATGGGAATC
AGAGTATGCATATACCAATGTCTACATATTCGAGATATTTAAGAAGTAGA
GTAACTAATGGAACCAATAGGGATCGAACAACATCGACAACGGTGTCCTC
ATCGTCATGTCGAACCTGACGACCCTCGAACTGTCCGATGATCAGTCCGT
TGTCTCGGTTGGCCCAGCCTACAGGTACCCCCATACCCTATTCAAGCCAC
CAATTGAACAAATAATCTAACGTCAAAAGATGGGCCGCCGTCTACGAATA
CCTCGAAAACTACAACCTCGCCGTAGCCGGAGGCCGTCTCGGCCCCGTCG
GCGTCCCCGGTCTGCTGCTCGCCGGCGGTATTAACTTCTACGGTAACCAG
GTCGGATTCGGCTGCGACACTGTCATCAACTATGAGGTTGTGCTTGCGAA
CGGCACCATCATCGAGGCCAACGCCACCAGCCACAGCGACCTCTTCTGGG
CGCTGAAGGGTGGAAGCAGCAACTTCGGTCTGGTGACTCGCTTCGATATG
GAGACTATTGAGTCGACTCAGGTCTGGGCTGGAACGTACACTGTTGCGGC
GGAGTATATTGATCAGTTTTTGGAGGTATGCCTTCCCATTTCTTTTGGAC
ACCATTATTATATATGAAGAAGGTATATGCTAATGATATGGGTATACAGG
CATCCGCCACCTACGCGGCCAACATCTCCGACCCCAAGACTCACATCGTC
CCCGCCGTCGTGCCGGAGGGCAACACGAGCGTCGGCTCAGTGATCCTCTT
CTACGACAGCGCCACGGAGAGCTACCCGGAGATCTTCAAGCCATTCACCG
ACATTCCGGCCGAGAGCAACACGCTGGGATTCAAGACCTTGGCGGAGTTT
GCGGCTGAGACGGGAGCGATGGTTACACCGCATATCAAGTACGCGCCACT
CCCGCCTCCACACTTTATCCCCACTACATTATTTAGCTACATGTATACTA
ATGATCATGGCAGTGACATCTTCGTCGCCGGTACCATCAAGGCAACCACC
TATGCCGACCTCTACCGCGGTATCAGCATCATCAACAGTACCTTCGCCGC
GCAGCTCCCCTCCCTGTATGCTCAGATCCCCACCGCCAACATCTCCATCA
TCGAGCTGGACTGGCAGCCCATTGGTGCCTCATGGCTCGAGGCCTCCGAG
TCTCGGGGTGGAAACGCTCTCGGTCTCGACAAGGACCAGGTGTATCTCTG
CTACGCTGAGGTCGTTGAGTGGATTGGCTCTGAGTATGATGAGATTGTGG
GCGAGTGGGTGGTTGAGACTACCTACAAGATCAACAATGCTACGCTGGAG
GCTGGCCTGTATGACAGCTTCAACTACATGGGTGATGCTGCGTGGTTCCA
GGATATCTTTGATGGATATGGAGAGGAGAACCTGGCCAAGTTGCAGACGA
TTGCCAAGAAGTATGATCCTAATGGTGTGTGGCAGGGGCTGATGCCGGGA
GGGTACAAGATCTTCTAAATGAGTCGACAGACGGATAGATAGAGTCAGTA
TTGTCTGCTTATAGCACTATTTCTAGATACTATAATAAATCCATCTTTCA
TAAAC back to topCoding sequence (CDS) from alignment at ch4:6055930..6058034+ >KJC3_006564-T1 ID=KJC3_006564-T1|Name=KJC3_006564-T1|organism=Aspergillus niger KJC3|type=CDS|length=7425bp|location=Sequence derived from alignment at ch4:6055930..6058034+ (Aspergillus niger KJC3)
ATGCGCATCGCCTCCCTCCTCCCTTTGACGGCGGCCGCCACTACGGTTGC
CGCCAAGGCCACCTCGGCCGGCTGCAAGGCCCTCAACAAGTCCCTGTCCA
GCGCGGTGTTTGCGCCCAGCTCCACTGTCTACCAGTATGAGGCGCAGAAC
TTCTGGTCCAATACGGAGATCATGTCTCCTGGCTGTGTATTCCGGCCCCA
GTCGGCTGAGGAATTGAGCCAGGGTGTCAAGGCGCTGGTGGACGCCGAGG
CGCAGTTTGCTGTGCGCGGTGGAGGACATATGGGAATCAGAGGATCGAAC
AACATCGACAACGGTGTCCTCATCGTCATGTCGAACCTGACGACCCTCGA
ACTGTCCGATGATCAGTCCGTTGTCTCGGTTGGCCCAGCCTACAGATGGG
CCGCCGTCTACGAATACCTCGAAAACTACAACCTCGCCGTAGCCGGAGGC
CGTCTCGGCCCCGTCGGCGTCCCCGGTCTGCTGCTCGCCGGCGGTATTAA
CTTCTACGGTAACCAGGTCGGATTCGGCTGCGACACTGTCATCAACTATG
AGGTTGTGCTTGCGAACGGCACCATCATCGAGGCCAACGCCACCAGCCAC
AGCGACCTCTTCTGGGCGCTGAAGGGTGGAAGCAGCAACTTCGGTCTGGT
GACTCGCTTCGATATGGAGACTATTGAGTCGACTCAGGTCTGGGCTGGAA
CGTACACTGTTGCGGCGGAGTATATTGATCAGTTTTTGGAGGCATCCGCC
ACCTACGCGGCCAACATCTCCGACCCCAAGACTCACATCGTCCCCGCCGT
CGTGCCGGAGGGCAACACGAGCGTCGGCTCAGTGATCCTCTTCTACGACA
GCGCCACGGAGAGCTACCCGGAGATCTTCAAGCCATTCACCGACATTCCG
GCCGAGAGCAACACGCTGGGATTCAAGACCTTGGCGGAGTTTGCGGCTGA
GACGGGAGCGATGGTTACACCGCATATCAATGACATCTTCGTCGCCGGTA
CCATCAAGGCAACCACCTATGCCGACCTCTACCGCGGTATCAGCATCATC
AACAGTACCTTCGCCGCGCAGCTCCCCTCCCTGTATGCTCAGATCCCCAC
CGCCAACATCTCCATCATCGAGCTGGACTGGCAGCCCATTGGTGCCTCAT
GGCTCGAGGCCTCCGAGTCTCGGGGTGGAAACGCTCTCGGTCTCGACAAG
GACCAGGTGTATCTCTGCTACGCTGAGGTCGTTGAGTGGATTGGCTCTGA
GTATGATGAGATTGTGGGCGAGTGGGTGGTTGAGACTACCTACAAGATCA
ACAATGCTACGCTGGAGGCTGGCCTGTATGACAGCTTCAACTACATGGGT
GATGCTGCGTGGTTCCAGGATATCTTTGATGGATATGGAGAGGAGAACCT
GGCCAAGTTGCAGACGATTGCCAAGAAGTATGATCCTAATGGTGTGTGGC
AGGGGCTGATGCCGGGAGGGTACAAGATCTTCTAAATGCGCATCGCCTCC
CTCCTCCCTTTGACGGCGGCCGCCACTACGGTTGCCGCCAAGGCCACCTC
GGCCGGCTGCAAGGCCCTCAACAAGTCCCTGTCCAGCGCGGTGTTTGCGC
CCAGCTCCACTGTCTACCAGTATGAGGCGCAGAACTTCTGGTCCAATACG
GAGATCATGTCTCCTGGCTGTGTATTCCGGCCCCAGTCGGCTGAGGAATT
GAGCCAGGGTGTCAAGGCGCTGGTGGACGCCGAGGCGCAGTTTGCTGTGC
GCGGTGGAGGACATATGGGAATCAGAGGATCGAACAACATCGACAACGGT
GTCCTCATCGTCATGTCGAACCTGACGACCCTCGAACTGTCCGATGATCA
GTCCGTTGTCTCGGTTGGCCCAGCCTACAGATGGGCCGCCGTCTACGAAT
ACCTCGAAAACTACAACCTCGCCGTAGCCGGAGGCCGTCTCGGCCCCGTC
GGCGTCCCCGGTCTGCTGCTCGCCGGCGGTATTAACTTCTACGGTAACCA
GGTCGGATTCGGCTGCGACACTGTCATCAACTATGAGGTTGTGCTTGCGA
ACGGCACCATCATCGAGGCCAACGCCACCAGCCACAGCGACCTCTTCTGG
GCGCTGAAGGGTGGAAGCAGCAACTTCGGTCTGGTGACTCGCTTCGATAT
GGAGACTATTGAGTCGACTCAGGTCTGGGCTGGAACGTACACTGTTGCGG
CGGAGTATATTGATCAGTTTTTGGAGGCATCCGCCACCTACGCGGCCAAC
ATCTCCGACCCCAAGACTCACATCGTCCCCGCCGTCGTGCCGGAGGGCAA
CACGAGCGTCGGCTCAGTGATCCTCTTCTACGACAGCGCCACGGAGAGCT
ACCCGGAGATCTTCAAGCCATTCACCGACATTCCGGCCGAGAGCAACACG
CTGGGATTCAAGACCTTGGCGGAGTTTGCGGCTGAGACGGGAGCGATGGT
TACACCGCATATCAATGACATCTTCGTCGCCGGTACCATCAAGGCAACCA
CCTATGCCGACCTCTACCGCGGTATCAGCATCATCAACAGTACCTTCGCC
GCGCAGCTCCCCTCCCTGTATGCTCAGATCCCCACCGCCAACATCTCCAT
CATCGAGCTGGACTGGCAGCCCATTGGTGCCTCATGGCTCGAGGCCTCCG
AGTCTCGGGGTGGAAACGCTCTCGGTCTCGACAAGGACCAGGTGTATCTC
TGCTACGCTGAGGTCGTTGAGTGGATTGGCTCTGAGTATGATGAGATTGT
GGGCGAGTGGGTGGTTGAGACTACCTACAAGATCAACAATGCTACGCTGG
AGGCTGGCCTGTATGACAGCTTCAACTACATGGGTGATGCTGCGTGGTTC
CAGGATATCTTTGATGGATATGGAGAGGAGAACCTGGCCAAGTTGCAGAC
GATTGCCAAGAAGTATGATCCTAATGGTGTGTGGCAGGGGCTGATGCCGG
GAGGGTACAAGATCTTCTAAATGCGCATCGCCTCCCTCCTCCCTTTGACG
GCGGCCGCCACTACGGTTGCCGCCAAGGCCACCTCGGCCGGCTGCAAGGC
CCTCAACAAGTCCCTGTCCAGCGCGGTGTTTGCGCCCAGCTCCACTGTCT
ACCAGTATGAGGCGCAGAACTTCTGGTCCAATACGGAGATCATGTCTCCT
GGCTGTGTATTCCGGCCCCAGTCGGCTGAGGAATTGAGCCAGGGTGTCAA
GGCGCTGGTGGACGCCGAGGCGCAGTTTGCTGTGCGCGGTGGAGGACATA
TGGGAATCAGAGGATCGAACAACATCGACAACGGTGTCCTCATCGTCATG
TCGAACCTGACGACCCTCGAACTGTCCGATGATCAGTCCGTTGTCTCGGT
TGGCCCAGCCTACAGATGGGCCGCCGTCTACGAATACCTCGAAAACTACA
ACCTCGCCGTAGCCGGAGGCCGTCTCGGCCCCGTCGGCGTCCCCGGTCTG
CTGCTCGCCGGCGGTATTAACTTCTACGGTAACCAGGTCGGATTCGGCTG
CGACACTGTCATCAACTATGAGGTTGTGCTTGCGAACGGCACCATCATCG
AGGCCAACGCCACCAGCCACAGCGACCTCTTCTGGGCGCTGAAGGGTGGA
AGCAGCAACTTCGGTCTGGTGACTCGCTTCGATATGGAGACTATTGAGTC
GACTCAGGTCTGGGCTGGAACGTACACTGTTGCGGCGGAGTATATTGATC
AGTTTTTGGAGGCATCCGCCACCTACGCGGCCAACATCTCCGACCCCAAG
ACTCACATCGTCCCCGCCGTCGTGCCGGAGGGCAACACGAGCGTCGGCTC
AGTGATCCTCTTCTACGACAGCGCCACGGAGAGCTACCCGGAGATCTTCA
AGCCATTCACCGACATTCCGGCCGAGAGCAACACGCTGGGATTCAAGACC
TTGGCGGAGTTTGCGGCTGAGACGGGAGCGATGGTTACACCGCATATCAA
TGACATCTTCGTCGCCGGTACCATCAAGGCAACCACCTATGCCGACCTCT
ACCGCGGTATCAGCATCATCAACAGTACCTTCGCCGCGCAGCTCCCCTCC
CTGTATGCTCAGATCCCCACCGCCAACATCTCCATCATCGAGCTGGACTG
GCAGCCCATTGGTGCCTCATGGCTCGAGGCCTCCGAGTCTCGGGGTGGAA
ACGCTCTCGGTCTCGACAAGGACCAGGTGTATCTCTGCTACGCTGAGGTC
GTTGAGTGGATTGGCTCTGAGTATGATGAGATTGTGGGCGAGTGGGTGGT
TGAGACTACCTACAAGATCAACAATGCTACGCTGGAGGCTGGCCTGTATG
ACAGCTTCAACTACATGGGTGATGCTGCGTGGTTCCAGGATATCTTTGAT
GGATATGGAGAGGAGAACCTGGCCAAGTTGCAGACGATTGCCAAGAAGTA
TGATCCTAATGGTGTGTGGCAGGGGCTGATGCCGGGAGGGTACAAGATCT
TCTAAATGCGCATCGCCTCCCTCCTCCCTTTGACGGCGGCCGCCACTACG
GTTGCCGCCAAGGCCACCTCGGCCGGCTGCAAGGCCCTCAACAAGTCCCT
GTCCAGCGCGGTGTTTGCGCCCAGCTCCACTGTCTACCAGTATGAGGCGC
AGAACTTCTGGTCCAATACGGAGATCATGTCTCCTGGCTGTGTATTCCGG
CCCCAGTCGGCTGAGGAATTGAGCCAGGGTGTCAAGGCGCTGGTGGACGC
CGAGGCGCAGTTTGCTGTGCGCGGTGGAGGACATATGGGAATCAGAGGAT
CGAACAACATCGACAACGGTGTCCTCATCGTCATGTCGAACCTGACGACC
CTCGAACTGTCCGATGATCAGTCCGTTGTCTCGGTTGGCCCAGCCTACAG
ATGGGCCGCCGTCTACGAATACCTCGAAAACTACAACCTCGCCGTAGCCG
GAGGCCGTCTCGGCCCCGTCGGCGTCCCCGGTCTGCTGCTCGCCGGCGGT
ATTAACTTCTACGGTAACCAGGTCGGATTCGGCTGCGACACTGTCATCAA
CTATGAGGTTGTGCTTGCGAACGGCACCATCATCGAGGCCAACGCCACCA
GCCACAGCGACCTCTTCTGGGCGCTGAAGGGTGGAAGCAGCAACTTCGGT
CTGGTGACTCGCTTCGATATGGAGACTATTGAGTCGACTCAGGTCTGGGC
TGGAACGTACACTGTTGCGGCGGAGTATATTGATCAGTTTTTGGAGGCAT
CCGCCACCTACGCGGCCAACATCTCCGACCCCAAGACTCACATCGTCCCC
GCCGTCGTGCCGGAGGGCAACACGAGCGTCGGCTCAGTGATCCTCTTCTA
CGACAGCGCCACGGAGAGCTACCCGGAGATCTTCAAGCCATTCACCGACA
TTCCGGCCGAGAGCAACACGCTGGGATTCAAGACCTTGGCGGAGTTTGCG
GCTGAGACGGGAGCGATGGTTACACCGCATATCAATGACATCTTCGTCGC
CGGTACCATCAAGGCAACCACCTATGCCGACCTCTACCGCGGTATCAGCA
TCATCAACAGTACCTTCGCCGCGCAGCTCCCCTCCCTGTATGCTCAGATC
CCCACCGCCAACATCTCCATCATCGAGCTGGACTGGCAGCCCATTGGTGC
CTCATGGCTCGAGGCCTCCGAGTCTCGGGGTGGAAACGCTCTCGGTCTCG
ACAAGGACCAGGTGTATCTCTGCTACGCTGAGGTCGTTGAGTGGATTGGC
TCTGAGTATGATGAGATTGTGGGCGAGTGGGTGGTTGAGACTACCTACAA
GATCAACAATGCTACGCTGGAGGCTGGCCTGTATGACAGCTTCAACTACA
TGGGTGATGCTGCGTGGTTCCAGGATATCTTTGATGGATATGGAGAGGAG
AACCTGGCCAAGTTGCAGACGATTGCCAAGAAGTATGATCCTAATGGTGT
GTGGCAGGGGCTGATGCCGGGAGGGTACAAGATCTTCTAAATGCGCATCG
CCTCCCTCCTCCCTTTGACGGCGGCCGCCACTACGGTTGCCGCCAAGGCC
ACCTCGGCCGGCTGCAAGGCCCTCAACAAGTCCCTGTCCAGCGCGGTGTT
TGCGCCCAGCTCCACTGTCTACCAGTATGAGGCGCAGAACTTCTGGTCCA
ATACGGAGATCATGTCTCCTGGCTGTGTATTCCGGCCCCAGTCGGCTGAG
GAATTGAGCCAGGGTGTCAAGGCGCTGGTGGACGCCGAGGCGCAGTTTGC
TGTGCGCGGTGGAGGACATATGGGAATCAGAGGATCGAACAACATCGACA
ACGGTGTCCTCATCGTCATGTCGAACCTGACGACCCTCGAACTGTCCGAT
GATCAGTCCGTTGTCTCGGTTGGCCCAGCCTACAGATGGGCCGCCGTCTA
CGAATACCTCGAAAACTACAACCTCGCCGTAGCCGGAGGCCGTCTCGGCC
CCGTCGGCGTCCCCGGTCTGCTGCTCGCCGGCGGTATTAACTTCTACGGT
AACCAGGTCGGATTCGGCTGCGACACTGTCATCAACTATGAGGTTGTGCT
TGCGAACGGCACCATCATCGAGGCCAACGCCACCAGCCACAGCGACCTCT
TCTGGGCGCTGAAGGGTGGAAGCAGCAACTTCGGTCTGGTGACTCGCTTC
GATATGGAGACTATTGAGTCGACTCAGGTCTGGGCTGGAACGTACACTGT
TGCGGCGGAGTATATTGATCAGTTTTTGGAGGCATCCGCCACCTACGCGG
CCAACATCTCCGACCCCAAGACTCACATCGTCCCCGCCGTCGTGCCGGAG
GGCAACACGAGCGTCGGCTCAGTGATCCTCTTCTACGACAGCGCCACGGA
GAGCTACCCGGAGATCTTCAAGCCATTCACCGACATTCCGGCCGAGAGCA
ACACGCTGGGATTCAAGACCTTGGCGGAGTTTGCGGCTGAGACGGGAGCG
ATGGTTACACCGCATATCAATGACATCTTCGTCGCCGGTACCATCAAGGC
AACCACCTATGCCGACCTCTACCGCGGTATCAGCATCATCAACAGTACCT
TCGCCGCGCAGCTCCCCTCCCTGTATGCTCAGATCCCCACCGCCAACATC
TCCATCATCGAGCTGGACTGGCAGCCCATTGGTGCCTCATGGCTCGAGGC
CTCCGAGTCTCGGGGTGGAAACGCTCTCGGTCTCGACAAGGACCAGGTGT
ATCTCTGCTACGCTGAGGTCGTTGAGTGGATTGGCTCTGAGTATGATGAG
ATTGTGGGCGAGTGGGTGGTTGAGACTACCTACAAGATCAACAATGCTAC
GCTGGAGGCTGGCCTGTATGACAGCTTCAACTACATGGGTGATGCTGCGT
GGTTCCAGGATATCTTTGATGGATATGGAGAGGAGAACCTGGCCAAGTTG
CAGACGATTGCCAAGAAGTATGATCCTAATGGTGTGTGGCAGGGGCTGAT
GCCGGGAGGGTACAAGATCTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006564-T1.utr5p1 | KJC3_006564-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006564-T1.utr3p1 | KJC3_006564-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:AA7 |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR006094 |
| DBxref | PFAM:PF01565 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6055930..6058034 + |
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