You are here

Home

KJC3_006581-T1, KJC3_006581-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006581-T1
Unique NameKJC3_006581-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6105611..6107980-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006581-T1 ID=KJC3_006581-T1|Name=KJC3_006581-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2370bp|location=Sequence derived from alignment at ch4:6105611..6107980- (Aspergillus niger KJC3)
ATGGAGTGCCATGACACCTCACAGATACCCAAATACATGGAATTCCTGGA
GGAACAAAGACAGATCCTGAAAGATGCCCAGTCTCGCAAGGGCCAGCCGG
CCAAACCGACAAAGTCCCGCGACGAAATAATCAAGCGGTTCATTCATTAC
TACTTCGCGGAGACTAGCTCACCTGTAGACAAGAACGCTATTCGCACCTC
ATTCGTGCCTCCTGCGTACCCACCCTCCATTGAGGCGATGAGTGATTTGA
AGAAGGCCCTCATTAAGGATCTCACCATCGAGACTCATCATCGTGGCTCT
TACACTCTGTTGAGAGCAGTCACTCCAGCATTCAGAAAGACGGGGATTAT
GGCCGTGGTAGAAGATGAGGAAGGAGACGTTCTTACGTTGCAATTGTATA
ACCAGGATAAGGACCTCGTTACTGATGGGCGGCTCGTTGATGGGACAATC
ATGCTCATAAAAGAGCCTTTCCTGAAAGTAATGGGTGATGGTGATTATGG
ACTGCGGGTCGACCACCTTTCTGATATCAGGTTCATCCTGGAGAATGATC
CTCTGGTGCCCGCGATCTGGAGGGACGAGTCAGAAGATCGTGGCTCTGCT
AACTCCTGGAGGAAAACTGGGAACAATCTCTACGAGCTTAAGGAATACCA
TCTTGCTCTCAATTGGTATATAATAGCCCGAAAACTAGAAAGCAACGCTG
ACCAAGGCACAGTTATTCCAAGGCTCTAGATTGTTCGACAACTCCCAAGG
ATGAGCTTGCCCTAAGGCTCAACCGTGCTCAGACATTCCTCAAAACCAAT
CAGTTCGACGCGGCCCTACGTGATGTCGAGCACATCCTATCCAAGGACAA
GTTCGTCGAGAAAGCATTGTTCCGCAAAGCCCAGGCCCTTTACTATCTTC
AGAGATATCAGCAGTCCTGTGATGTTTACGTCGACCTTTGCAAGGCCTAT
CCAAACAACGCCACTGCTAAAAGCGAGTTTGCTCGAGCCACAGCACGGCT
TTTCGAGCAGCGGACTGGCGAATACCCATTTAAACAAATGCAACAAGAGG
CAACGAAGCTTAAGCCCCCGCATTTCGATCTTGCAACGTATATTGGCCCT
GTTGCGGTGAGACCCTCGACCCATGGACGTGGTTTGTTTACAACACAGGC
GGTCCGTGCCGGCGACCTTCTCATATGCGAAAAGGCCTTTGCGCATGCCT
TTCATGACGACGGCGATAATACCAACGTTTCGATATTGGTGTACGCCGAC
ACAAACAGTATGAAAGTGGGAACCCAGGCCGAATTGAATAGTCTCATCGC
ACGAAAGCTGCAAAAGAATCCATCGTTGATTCCAGCATTCAATGACCTGT
ACCACGGCTCATATACACCGGTGGGCGTCTCTGAGGTCGACGGTTCACCT
GTCGTTGATACGTAAGTACTTCCCCTCGCGCAAGCAACATGAGACTAATA
TTTCCAGTTTCCTGGTTGAGCGAATAATGTCCCTCAATGGTTTCGGCTGC
TCGACCACCTCCCGTACAGCGCATATAGCCAGGGTTAATGCTGACAACAG
GGAACCTCACACCGAGGAGGAACATTTTGATTCCAGTGGAGTCTGGCGTC
TCGCATCTTACGTAAATCACTCCTGTTACCCGAACACCCACCGTGCATTC
ATCGGGGACATGATGGTAGTTCGCGCTACACAGGACCTTCCCGCAAACAC
GGAGCTCAAATTCTGGTACCGAACACCCGTGGATGATGGTACTGCAGAAG
ACATATACCAGAAATATTGGGGATTCCAATGTGACTGCGTTATCTGTAAG
GATGTGCGCGAAACCGGGGAAGGCAATATGGCGAAGCGGAGAGAACTCAT
GGCTGCTTCGGACTCGTCTATGAATATCGTAGCTAAGGCCTACGGGTCCT
CATTCAGCCTCCAGGAACAGAGTGTTGCGATTACTATGACAGAAGCCGCC
ATTGTTATGATCGAGAAAACGTATCGGCGATCACCCTTGGAAGTGCCTCG
TCTTGGGATCTGTAAAACAGGCTTGTTTTTGGCAGAGGTGCATGCCACCC
ACGGCCGTTGGCGGAAAGCCATTGGATACGCTATCAGAACGCTGGAGTCG
CTTGGCTACGTGATTGAAGGTTGGCAAGTTCCGTATAAGGAAGGTAGAAA
GTTACATGTCAAGCGGTGGGGACTGGCGATGGATGTTCTTGTTCGCTGCT
GGATGATCCTTTGCCGCGCGTATGGTGAGGTAGCACCTGAGCTTGCTGAC
CAAGCTGAATACTACGCGAGAACAACGTACAGAATATGCATTGGTGAGGA
TGAAACATTTGAGGATACTTATAATCGGTCCTCTCACCGAGTCGATGGAA
TGATTGTGCACGGTAGTTGA
back to top

Coding sequence (CDS) from alignment at ch4:6105611..6107980-

>KJC3_006581-T1 ID=KJC3_006581-T1|Name=KJC3_006581-T1|organism=Aspergillus niger KJC3|type=CDS|length=6831bp|location=Sequence derived from alignment at ch4:6105611..6107980- (Aspergillus niger KJC3)
TTTCCTGGTTGAGCGAATAATGTCCCTCAATGGTTTCGGCTGCTCGACCA
CCTCCCGTACAGCGCATATAGCCAGGGTTAATGCTGACAACAGGGAACCT
CACACCGAGGAGGAACATTTTGATTCCAGTGGAGTCTGGCGTCTCGCATC
TTACGTAAATCACTCCTGTTACCCGAACACCCACCGTGCATTCATCGGGG
ACATGATGGTAGTTCGCGCTACACAGGACCTTCCCGCAAACACGGAGCTC
AAATTCTGGTACCGAACACCCGTGGATGATGGTACTGCAGAAGACATATA
CCAGAAATATTGGGGATTCCAATGTGACTGCGTTATCTGTAAGGATGTGC
GCGAAACCGGGGAAGGCAATATGGCGAAGCGGAGAGAACTCATGGCTGCT
TCGGACTCGTCTATGAATATCGTAGCTAAGGCCTACGGGTCCTCATTCAG
CCTCCAGGAACAGAGTGTTGCGATTACTATGACAGAAGCCGCCATTGTTA
TGATCGAGAAAACGTATCGGCGATCACCCTTGGAAGTGCCTCGTCTTGGG
ATCTGTAAAACAGGCTTGTTTTTGGCAGAGGTGCATGCCACCCACGGCCG
TTGGCGGAAAGCCATTGGATACGCTATCAGAACGCTGGAGTCGCTTGGCT
ACGTGATTGAAGGTTGGCAAGTTCCGTATAAGGAAGGTAGAAAGTTACAT
GTCAAGCGGTGGGGACTGGCGATGGATGTTCTTGTTCGCTGCTGGATGAT
CCTTTGCCGCGCGTATGGTGAGGTAGCACCTGAGCTTGCTGACCAAGCTG
AATACTACGCGAGAACAACGTACAGAATATGCATTGGTGAGGATGAAACA
TTTGAGGATACTTATAATCGGTCCTCTCACCGAGTCGATGGAATGATTGT
GCACGGTAGTTGATTATTCCAAGGCTCTAGATTGTTCGACAACTCCCAAG
GATGAGCTTGCCCTAAGGCTCAACCGTGCTCAGACATTCCTCAAAACCAA
TCAGTTCGACGCGGCCCTACGTGATGTCGAGCACATCCTATCCAAGGACA
AGTTCGTCGAGAAAGCATTGTTCCGCAAAGCCCAGGCCCTTTACTATCTT
CAGAGATATCAGCAGTCCTGTGATGTTTACGTCGACCTTTGCAAGGCCTA
TCCAAACAACGCCACTGCTAAAAGCGAGTTTGCTCGAGCCACAGCACGGC
TTTTCGAGCAGCGGACTGGCGAATACCCATTTAAACAAATGCAACAAGAG
GCAACGAAGCTTAAGCCCCCGCATTTCGATCTTGCAACGTATATTGGCCC
TGTTGCGGTGAGACCCTCGACCCATGGACGTGGTTTGTTTACAACACAGG
CGGTCCGTGCCGGCGACCTTCTCATATGCGAAAAGGCCTTTGCGCATGCC
TTTCATGACGACGGCGATAATACCAACGTTTCGATATTGGTGTACGCCGA
CACAAACAGTATGAAAGTGGGAACCCAGGCCGAATTGAATAGTCTCATCG
CACGAAAGCTGCAAAAGAATCCATCGTTGATTCCAGCATTCAATGACCTG
TACCACGGCTCATATACACCGGTGGGCGTCTCTGAGGTCGACGGTTCACC
TGTCGTTGATACATGGAGTGCCATGACACCTCACAGATACCCAAATACAT
GGAATTCCTGGAGGAACAAAGACAGATCCTGAAAGATGCCCAGTCTCGCA
AGGGCCAGCCGGCCAAACCGACAAAGTCCCGCGACGAAATAATCAAGCGG
TTCATTCATTACTACTTCGCGGAGACTAGCTCACCTGTAGACAAGAACGC
TATTCGCACCTCATTCGTGCCTCCTGCGTACCCACCCTCCATTGAGGCGA
TGAGTGATTTGAAGAAGGCCCTCATTAAGGATCTCACCATCGAGACTCAT
CATCGTGGCTCTTACACTCTGTTGAGAGCAGTCACTCCAGCATTCAGAAA
GACGGGGATTATGGCCGTGGTAGAAGATGAGGAAGGAGACGTTCTTACGT
TGCAATTGTATAACCAGGATAAGGACCTCGTTACTGATGGGCGGCTCGTT
GATGGGACAATCATGCTCATAAAAGAGCCTTTCCTGAAAGTAATGGGTGA
TGGTGATTATGGACTGCGGGTCGACCACCTTTCTGATATCAGGTTCATCC
TGGAGAATGATCCTCTGGTGCCCGCGATCTGGAGGGACGAGTCAGAAGAT
CGTGGCTCTGCTAACTCCTGGAGGAAAACTGGGAACAATCTCTACGAGCT
TAAGGAATACCATCTTGCTCTCAATTGTTTCCTGGTTGAGCGAATAATGT
CCCTCAATGGTTTCGGCTGCTCGACCACCTCCCGTACAGCGCATATAGCC
AGGGTTAATGCTGACAACAGGGAACCTCACACCGAGGAGGAACATTTTGA
TTCCAGTGGAGTCTGGCGTCTCGCATCTTACGTAAATCACTCCTGTTACC
CGAACACCCACCGTGCATTCATCGGGGACATGATGGTAGTTCGCGCTACA
CAGGACCTTCCCGCAAACACGGAGCTCAAATTCTGGTACCGAACACCCGT
GGATGATGGTACTGCAGAAGACATATACCAGAAATATTGGGGATTCCAAT
GTGACTGCGTTATCTGTAAGGATGTGCGCGAAACCGGGGAAGGCAATATG
GCGAAGCGGAGAGAACTCATGGCTGCTTCGGACTCGTCTATGAATATCGT
AGCTAAGGCCTACGGGTCCTCATTCAGCCTCCAGGAACAGAGTGTTGCGA
TTACTATGACAGAAGCCGCCATTGTTATGATCGAGAAAACGTATCGGCGA
TCACCCTTGGAAGTGCCTCGTCTTGGGATCTGTAAAACAGGCTTGTTTTT
GGCAGAGGTGCATGCCACCCACGGCCGTTGGCGGAAAGCCATTGGATACG
CTATCAGAACGCTGGAGTCGCTTGGCTACGTGATTGAAGGTTGGCAAGTT
CCGTATAAGGAAGGTAGAAAGTTACATGTCAAGCGGTGGGGACTGGCGAT
GGATGTTCTTGTTCGCTGCTGGATGATCCTTTGCCGCGCGTATGGTGAGG
TAGCACCTGAGCTTGCTGACCAAGCTGAATACTACGCGAGAACAACGTAC
AGAATATGCATTGGTGAGGATGAAACATTTGAGGATACTTATAATCGGTC
CTCTCACCGAGTCGATGGAATGATTGTGCACGGTAGTTGATTATTCCAAG
GCTCTAGATTGTTCGACAACTCCCAAGGATGAGCTTGCCCTAAGGCTCAA
CCGTGCTCAGACATTCCTCAAAACCAATCAGTTCGACGCGGCCCTACGTG
ATGTCGAGCACATCCTATCCAAGGACAAGTTCGTCGAGAAAGCATTGTTC
CGCAAAGCCCAGGCCCTTTACTATCTTCAGAGATATCAGCAGTCCTGTGA
TGTTTACGTCGACCTTTGCAAGGCCTATCCAAACAACGCCACTGCTAAAA
GCGAGTTTGCTCGAGCCACAGCACGGCTTTTCGAGCAGCGGACTGGCGAA
TACCCATTTAAACAAATGCAACAAGAGGCAACGAAGCTTAAGCCCCCGCA
TTTCGATCTTGCAACGTATATTGGCCCTGTTGCGGTGAGACCCTCGACCC
ATGGACGTGGTTTGTTTACAACACAGGCGGTCCGTGCCGGCGACCTTCTC
ATATGCGAAAAGGCCTTTGCGCATGCCTTTCATGACGACGGCGATAATAC
CAACGTTTCGATATTGGTGTACGCCGACACAAACAGTATGAAAGTGGGAA
CCCAGGCCGAATTGAATAGTCTCATCGCACGAAAGCTGCAAAAGAATCCA
TCGTTGATTCCAGCATTCAATGACCTGTACCACGGCTCATATACACCGGT
GGGCGTCTCTGAGGTCGACGGTTCACCTGTCGTTGATACATGGAGTGCCA
TGACACCTCACAGATACCCAAATACATGGAATTCCTGGAGGAACAAAGAC
AGATCCTGAAAGATGCCCAGTCTCGCAAGGGCCAGCCGGCCAAACCGACA
AAGTCCCGCGACGAAATAATCAAGCGGTTCATTCATTACTACTTCGCGGA
GACTAGCTCACCTGTAGACAAGAACGCTATTCGCACCTCATTCGTGCCTC
CTGCGTACCCACCCTCCATTGAGGCGATGAGTGATTTGAAGAAGGCCCTC
ATTAAGGATCTCACCATCGAGACTCATCATCGTGGCTCTTACACTCTGTT
GAGAGCAGTCACTCCAGCATTCAGAAAGACGGGGATTATGGCCGTGGTAG
AAGATGAGGAAGGAGACGTTCTTACGTTGCAATTGTATAACCAGGATAAG
GACCTCGTTACTGATGGGCGGCTCGTTGATGGGACAATCATGCTCATAAA
AGAGCCTTTCCTGAAAGTAATGGGTGATGGTGATTATGGACTGCGGGTCG
ACCACCTTTCTGATATCAGGTTCATCCTGGAGAATGATCCTCTGGTGCCC
GCGATCTGGAGGGACGAGTCAGAAGATCGTGGCTCTGCTAACTCCTGGAG
GAAAACTGGGAACAATCTCTACGAGCTTAAGGAATACCATCTTGCTCTCA
ATTGTTTCCTGGTTGAGCGAATAATGTCCCTCAATGGTTTCGGCTGCTCG
ACCACCTCCCGTACAGCGCATATAGCCAGGGTTAATGCTGACAACAGGGA
ACCTCACACCGAGGAGGAACATTTTGATTCCAGTGGAGTCTGGCGTCTCG
CATCTTACGTAAATCACTCCTGTTACCCGAACACCCACCGTGCATTCATC
GGGGACATGATGGTAGTTCGCGCTACACAGGACCTTCCCGCAAACACGGA
GCTCAAATTCTGGTACCGAACACCCGTGGATGATGGTACTGCAGAAGACA
TATACCAGAAATATTGGGGATTCCAATGTGACTGCGTTATCTGTAAGGAT
GTGCGCGAAACCGGGGAAGGCAATATGGCGAAGCGGAGAGAACTCATGGC
TGCTTCGGACTCGTCTATGAATATCGTAGCTAAGGCCTACGGGTCCTCAT
TCAGCCTCCAGGAACAGAGTGTTGCGATTACTATGACAGAAGCCGCCATT
GTTATGATCGAGAAAACGTATCGGCGATCACCCTTGGAAGTGCCTCGTCT
TGGGATCTGTAAAACAGGCTTGTTTTTGGCAGAGGTGCATGCCACCCACG
GCCGTTGGCGGAAAGCCATTGGATACGCTATCAGAACGCTGGAGTCGCTT
GGCTACGTGATTGAAGGTTGGCAAGTTCCGTATAAGGAAGGTAGAAAGTT
ACATGTCAAGCGGTGGGGACTGGCGATGGATGTTCTTGTTCGCTGCTGGA
TGATCCTTTGCCGCGCGTATGGTGAGGTAGCACCTGAGCTTGCTGACCAA
GCTGAATACTACGCGAGAACAACGTACAGAATATGCATTGGTGAGGATGA
AACATTTGAGGATACTTATAATCGGTCCTCTCACCGAGTCGATGGAATGA
TTGTGCACGGTAGTTGATTATTCCAAGGCTCTAGATTGTTCGACAACTCC
CAAGGATGAGCTTGCCCTAAGGCTCAACCGTGCTCAGACATTCCTCAAAA
CCAATCAGTTCGACGCGGCCCTACGTGATGTCGAGCACATCCTATCCAAG
GACAAGTTCGTCGAGAAAGCATTGTTCCGCAAAGCCCAGGCCCTTTACTA
TCTTCAGAGATATCAGCAGTCCTGTGATGTTTACGTCGACCTTTGCAAGG
CCTATCCAAACAACGCCACTGCTAAAAGCGAGTTTGCTCGAGCCACAGCA
CGGCTTTTCGAGCAGCGGACTGGCGAATACCCATTTAAACAAATGCAACA
AGAGGCAACGAAGCTTAAGCCCCCGCATTTCGATCTTGCAACGTATATTG
GCCCTGTTGCGGTGAGACCCTCGACCCATGGACGTGGTTTGTTTACAACA
CAGGCGGTCCGTGCCGGCGACCTTCTCATATGCGAAAAGGCCTTTGCGCA
TGCCTTTCATGACGACGGCGATAATACCAACGTTTCGATATTGGTGTACG
CCGACACAAACAGTATGAAAGTGGGAACCCAGGCCGAATTGAATAGTCTC
ATCGCACGAAAGCTGCAAAAGAATCCATCGTTGATTCCAGCATTCAATGA
CCTGTACCACGGCTCATATACACCGGTGGGCGTCTCTGAGGTCGACGGTT
CACCTGTCGTTGATACATGGAGTGCCATGACACCTCACAGATACCCAAAT
ACATGGAATTCCTGGAGGAACAAAGACAGATCCTGAAAGATGCCCAGTCT
CGCAAGGGCCAGCCGGCCAAACCGACAAAGTCCCGCGACGAAATAATCAA
GCGGTTCATTCATTACTACTTCGCGGAGACTAGCTCACCTGTAGACAAGA
ACGCTATTCGCACCTCATTCGTGCCTCCTGCGTACCCACCCTCCATTGAG
GCGATGAGTGATTTGAAGAAGGCCCTCATTAAGGATCTCACCATCGAGAC
TCATCATCGTGGCTCTTACACTCTGTTGAGAGCAGTCACTCCAGCATTCA
GAAAGACGGGGATTATGGCCGTGGTAGAAGATGAGGAAGGAGACGTTCTT
ACGTTGCAATTGTATAACCAGGATAAGGACCTCGTTACTGATGGGCGGCT
CGTTGATGGGACAATCATGCTCATAAAAGAGCCTTTCCTGAAAGTAATGG
GTGATGGTGATTATGGACTGCGGGTCGACCACCTTTCTGATATCAGGTTC
ATCCTGGAGAATGATCCTCTGGTGCCCGCGATCTGGAGGGACGAGTCAGA
AGATCGTGGCTCTGCTAACTCCTGGAGGAAAACTGGGAACAATCTCTACG
AGCTTAAGGAATACCATCTTGCTCTCAATTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006581KJC3_006581Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006581-T1KJC3_006581-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006581-T1.cdsKJC3_006581-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006581-T1.exon3KJC3_006581-T1.exon3Aspergillus niger KJC3exon
KJC3_006581-T1.exon2KJC3_006581-T1.exon2Aspergillus niger KJC3exon
KJC3_006581-T1.exon1KJC3_006581-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_4.13
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR001214
DBxrefPFAM:PF00856
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6105611..6107980 -
Powered by Drupal