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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6109490..6111430- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006582-T1 ID=KJC3_006582-T1|Name=KJC3_006582-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1941bp|location=Sequence derived from alignment at ch4:6109490..6111430- (Aspergillus niger KJC3)
GTCTGAGTTAAAAGAATCCATCCCTTGCCCTTTAGGTTTTGGTGGCGACG
ACAGCCCTTTCGTAATATTATCCATTTATTCGGATCCTTCCTGCACAGAA
CCACAAAAGACCGCGAATTCCCCTCTTCCCCCCCTCCCTGAAATGGGAAA
CTTATATGGAATCGCCTGACCCGCCTGGTCGCTGCTCCCTGCATCGCTGA
CTCGTATCGCCGGCCGTGCAGGATGACTTACGAAGAGAATCGATACTGGA
AGAATGTTCTGACCATCGTGCCCATCATTGGTGCTGCCCTGGCCACCGTT
TCGTATGTCCTGCGTCTGTATTCGCGGCGCTTTACCACGGCCGGTTTGAA
AGTGGAGGACTGGTTGATGGGCGTGGGCCTGCTTCTTTCTTACTGCGCAA
CCGCCTTTGTTGTGGACAGTGAGTTGCTCGCACTTCTTTCTTGTGCATAG
CTGGCCGCCCGGGTGAATACTGATTTCCCCTGTCATATAGCTGCATTCAA
TGGCGTGGGTTTACCAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTA
TCCAATTCGTATGTTCTCAATGGCACCACTTGGTTCTCTGTGGGCACCCA
CTAACGTATGCACGAAATTGATACAGGGTTCATGGATGATACAGAAGTTT
TGGGCGCCATCGGCTGCGTTTGTGAAGATATCGATCGTCGTGTTTCTGAA
GCGTCTACTGGGAACGGTGCGCGCATATGCAATCATCTCGAACGTTCTGA
TTGCCTTTATCGCCTGTTGGGCCCTGACGGCACTGTTGGTCAATATATTT
CAATGTACGCCGGTTCAATATTACTATAACAAGGATCTTAAGGGACATTG
CATGAGCGGTCAGCGATCCTTCTTCCAGGCGATGGGAGCGATTTCTTTGG
TTGAGGATGTCATCGTGCTGTGTCTACCCACGCCTATCGTTTGGGGCCTG
CAGATTACTTTTCGCCAGAAAATTGCTGTGACGCTTGTGTTCTCGCTGGG
CGGATTGTAGGTTATTCCTGTGGAAGGCATGCAATCTCGGCGCTAACAAC
TGAACAGGGTTTGTATATTCAGTCTGATGCGTCTGATTGAGTTCCGTACC
TTCGTGACCACCGACTTGGCTTGTGAGTTACACCTTTTTTTGTAGAGCAC
CATTGACCCTCACGACTGACCTGTTACAGCCTCGAGTGCCAAAGAATCTG
TCTGGACTTGTCTCGAACTCGATGTCGCCATCATCTGTGGCTGTCTCCCA
CTCATGAAACCGCTGATTCAGGGCTTCCTCGGTAAAGTGCGAAGCGGAGT
CTCCAAAGCCCGTTCCCATCCGTCATCCGGCACGAAGCTATACTTCCCCA
ACGGAACCACCCACAACAATGATGGATTTCGCCAGATCAACGATCCATTA
AGCTCCCTGGCCTCCAAGAATGCTCATATTGCGGCCAATGAAAGTCGAAG
AAGTTCAGACGTTGAGCTGCAGGGCATCGCGGTAACCACCCGGATTGATC
AGGATGTTGACCGCCCGCGTACCGGAAACTCGACAGATATCTCCGCCGAC
CACGTATGGCCACGGTGAAATGTACCGCTAGGATGATCGTCGGTTTCGAG
CCTACAAACAGTGCAGCAGCCTCCCGGATAAGAAGGGCTACCCAGCGCGG
CTTGACGAAGGGGTCAGCCTGCATCCCGACCCCCGCACCGTGCACTCATC
AGACACAAGGGACCTTGCATGCGTTGTCCATGCGGGATCGAGGAATATGG
TGTCCTGGGATTTGGCTCCGGCCAGACATCTCCGCGGTAATAATGGAGAT
GAAAGAGTCTACTGCTCATCTGCGACGCATCTGAAATAGATGCGATAAGC
CACGCCATCGGCATAAACATCTACGAAGTCTGACGAATAGATATAGATCG
ATAGAGTAAACCTAATGCAAATAATACTACCCTACTATCGC back to topCoding sequence (CDS) from alignment at ch4:6109490..6111430- >KJC3_006582-T1 ID=KJC3_006582-T1|Name=KJC3_006582-T1|organism=Aspergillus niger KJC3|type=CDS|length=5490bp|location=Sequence derived from alignment at ch4:6109490..6111430- (Aspergillus niger KJC3)
CCTCGAGTGCCAAAGAATCTGTCTGGACTTGTCTCGAACTCGATGTCGCC
ATCATCTGTGGCTGTCTCCCACTCATGAAACCGCTGATTCAGGGCTTCCT
CGGTAAAGTGCGAAGCGGAGTCTCCAAAGCCCGTTCCCATCCGTCATCCG
GCACGAAGCTATACTTCCCCAACGGAACCACCCACAACAATGATGGATTT
CGCCAGATCAACGATCCATTAAGCTCCCTGGCCTCCAAGAATGCTCATAT
TGCGGCCAATGAAAGTCGAAGAAGTTCAGACGTTGAGCTGCAGGGCATCG
CGGTAACCACCCGGATTGATCAGGATGTTGACCGCCCGCGTACCGGAAAC
TCGACAGATATCTCCGCCGACCACGTATGGCCACGGTGAGGTTTGTATAT
TCAGTCTGATGCGTCTGATTGAGTTCCGTACCTTCGTGACCACCGACTTG
GCTTGGTTCATGGATGATACAGAAGTTTTGGGCGCCATCGGCTGCGTTTG
TGAAGATATCGATCGTCGTGTTTCTGAAGCGTCTACTGGGAACGGTGCGC
GCATATGCAATCATCTCGAACGTTCTGATTGCCTTTATCGCCTGTTGGGC
CCTGACGGCACTGTTGGTCAATATATTTCAATGTACGCCGGTTCAATATT
ACTATAACAAGGATCTTAAGGGACATTGCATGAGCGGTCAGCGATCCTTC
TTCCAGGCGATGGGAGCGATTTCTTTGGTTGAGGATGTCATCGTGCTGTG
TCTACCCACGCCTATCGTTTGGGGCCTGCAGATTACTTTTCGCCAGAAAA
TTGCTGTGACGCTTGTGTTCTCGCTGGGCGGATTCTGCATTCAATGGCGT
GGGTTTACCAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTATCCAAT
TCATGACTTACGAAGAGAATCGATACTGGAAGAATGTTCTGACCATCGTG
CCCATCATTGGTGCTGCCCTGGCCACCGTTTCGTATGTCCTGCGTCTGTA
TTCGCGGCGCTTTACCACGGCCGGTTTGAAAGTGGAGGACTGGTTGATGG
GCGTGGGCCTGCTTCTTTCTTACTGCGCAACCGCCTTTGTTGTGGACACC
TCGAGTGCCAAAGAATCTGTCTGGACTTGTCTCGAACTCGATGTCGCCAT
CATCTGTGGCTGTCTCCCACTCATGAAACCGCTGATTCAGGGCTTCCTCG
GTAAAGTGCGAAGCGGAGTCTCCAAAGCCCGTTCCCATCCGTCATCCGGC
ACGAAGCTATACTTCCCCAACGGAACCACCCACAACAATGATGGATTTCG
CCAGATCAACGATCCATTAAGCTCCCTGGCCTCCAAGAATGCTCATATTG
CGGCCAATGAAAGTCGAAGAAGTTCAGACGTTGAGCTGCAGGGCATCGCG
GTAACCACCCGGATTGATCAGGATGTTGACCGCCCGCGTACCGGAAACTC
GACAGATATCTCCGCCGACCACGTATGGCCACGGTGAGGTTTGTATATTC
AGTCTGATGCGTCTGATTGAGTTCCGTACCTTCGTGACCACCGACTTGGC
TTGGTTCATGGATGATACAGAAGTTTTGGGCGCCATCGGCTGCGTTTGTG
AAGATATCGATCGTCGTGTTTCTGAAGCGTCTACTGGGAACGGTGCGCGC
ATATGCAATCATCTCGAACGTTCTGATTGCCTTTATCGCCTGTTGGGCCC
TGACGGCACTGTTGGTCAATATATTTCAATGTACGCCGGTTCAATATTAC
TATAACAAGGATCTTAAGGGACATTGCATGAGCGGTCAGCGATCCTTCTT
CCAGGCGATGGGAGCGATTTCTTTGGTTGAGGATGTCATCGTGCTGTGTC
TACCCACGCCTATCGTTTGGGGCCTGCAGATTACTTTTCGCCAGAAAATT
GCTGTGACGCTTGTGTTCTCGCTGGGCGGATTCTGCATTCAATGGCGTGG
GTTTACCAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTATCCAATTC
ATGACTTACGAAGAGAATCGATACTGGAAGAATGTTCTGACCATCGTGCC
CATCATTGGTGCTGCCCTGGCCACCGTTTCGTATGTCCTGCGTCTGTATT
CGCGGCGCTTTACCACGGCCGGTTTGAAAGTGGAGGACTGGTTGATGGGC
GTGGGCCTGCTTCTTTCTTACTGCGCAACCGCCTTTGTTGTGGACACCTC
GAGTGCCAAAGAATCTGTCTGGACTTGTCTCGAACTCGATGTCGCCATCA
TCTGTGGCTGTCTCCCACTCATGAAACCGCTGATTCAGGGCTTCCTCGGT
AAAGTGCGAAGCGGAGTCTCCAAAGCCCGTTCCCATCCGTCATCCGGCAC
GAAGCTATACTTCCCCAACGGAACCACCCACAACAATGATGGATTTCGCC
AGATCAACGATCCATTAAGCTCCCTGGCCTCCAAGAATGCTCATATTGCG
GCCAATGAAAGTCGAAGAAGTTCAGACGTTGAGCTGCAGGGCATCGCGGT
AACCACCCGGATTGATCAGGATGTTGACCGCCCGCGTACCGGAAACTCGA
CAGATATCTCCGCCGACCACGTATGGCCACGGTGAGGTTTGTATATTCAG
TCTGATGCGTCTGATTGAGTTCCGTACCTTCGTGACCACCGACTTGGCTT
GGTTCATGGATGATACAGAAGTTTTGGGCGCCATCGGCTGCGTTTGTGAA
GATATCGATCGTCGTGTTTCTGAAGCGTCTACTGGGAACGGTGCGCGCAT
ATGCAATCATCTCGAACGTTCTGATTGCCTTTATCGCCTGTTGGGCCCTG
ACGGCACTGTTGGTCAATATATTTCAATGTACGCCGGTTCAATATTACTA
TAACAAGGATCTTAAGGGACATTGCATGAGCGGTCAGCGATCCTTCTTCC
AGGCGATGGGAGCGATTTCTTTGGTTGAGGATGTCATCGTGCTGTGTCTA
CCCACGCCTATCGTTTGGGGCCTGCAGATTACTTTTCGCCAGAAAATTGC
TGTGACGCTTGTGTTCTCGCTGGGCGGATTCTGCATTCAATGGCGTGGGT
TTACCAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTATCCAATTCAT
GACTTACGAAGAGAATCGATACTGGAAGAATGTTCTGACCATCGTGCCCA
TCATTGGTGCTGCCCTGGCCACCGTTTCGTATGTCCTGCGTCTGTATTCG
CGGCGCTTTACCACGGCCGGTTTGAAAGTGGAGGACTGGTTGATGGGCGT
GGGCCTGCTTCTTTCTTACTGCGCAACCGCCTTTGTTGTGGACACCTCGA
GTGCCAAAGAATCTGTCTGGACTTGTCTCGAACTCGATGTCGCCATCATC
TGTGGCTGTCTCCCACTCATGAAACCGCTGATTCAGGGCTTCCTCGGTAA
AGTGCGAAGCGGAGTCTCCAAAGCCCGTTCCCATCCGTCATCCGGCACGA
AGCTATACTTCCCCAACGGAACCACCCACAACAATGATGGATTTCGCCAG
ATCAACGATCCATTAAGCTCCCTGGCCTCCAAGAATGCTCATATTGCGGC
CAATGAAAGTCGAAGAAGTTCAGACGTTGAGCTGCAGGGCATCGCGGTAA
CCACCCGGATTGATCAGGATGTTGACCGCCCGCGTACCGGAAACTCGACA
GATATCTCCGCCGACCACGTATGGCCACGGTGAGGTTTGTATATTCAGTC
TGATGCGTCTGATTGAGTTCCGTACCTTCGTGACCACCGACTTGGCTTGG
TTCATGGATGATACAGAAGTTTTGGGCGCCATCGGCTGCGTTTGTGAAGA
TATCGATCGTCGTGTTTCTGAAGCGTCTACTGGGAACGGTGCGCGCATAT
GCAATCATCTCGAACGTTCTGATTGCCTTTATCGCCTGTTGGGCCCTGAC
GGCACTGTTGGTCAATATATTTCAATGTACGCCGGTTCAATATTACTATA
ACAAGGATCTTAAGGGACATTGCATGAGCGGTCAGCGATCCTTCTTCCAG
GCGATGGGAGCGATTTCTTTGGTTGAGGATGTCATCGTGCTGTGTCTACC
CACGCCTATCGTTTGGGGCCTGCAGATTACTTTTCGCCAGAAAATTGCTG
TGACGCTTGTGTTCTCGCTGGGCGGATTCTGCATTCAATGGCGTGGGTTT
ACCAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTATCCAATTCATGA
CTTACGAAGAGAATCGATACTGGAAGAATGTTCTGACCATCGTGCCCATC
ATTGGTGCTGCCCTGGCCACCGTTTCGTATGTCCTGCGTCTGTATTCGCG
GCGCTTTACCACGGCCGGTTTGAAAGTGGAGGACTGGTTGATGGGCGTGG
GCCTGCTTCTTTCTTACTGCGCAACCGCCTTTGTTGTGGACACCTCGAGT
GCCAAAGAATCTGTCTGGACTTGTCTCGAACTCGATGTCGCCATCATCTG
TGGCTGTCTCCCACTCATGAAACCGCTGATTCAGGGCTTCCTCGGTAAAG
TGCGAAGCGGAGTCTCCAAAGCCCGTTCCCATCCGTCATCCGGCACGAAG
CTATACTTCCCCAACGGAACCACCCACAACAATGATGGATTTCGCCAGAT
CAACGATCCATTAAGCTCCCTGGCCTCCAAGAATGCTCATATTGCGGCCA
ATGAAAGTCGAAGAAGTTCAGACGTTGAGCTGCAGGGCATCGCGGTAACC
ACCCGGATTGATCAGGATGTTGACCGCCCGCGTACCGGAAACTCGACAGA
TATCTCCGCCGACCACGTATGGCCACGGTGAGGTTTGTATATTCAGTCTG
ATGCGTCTGATTGAGTTCCGTACCTTCGTGACCACCGACTTGGCTTGGTT
CATGGATGATACAGAAGTTTTGGGCGCCATCGGCTGCGTTTGTGAAGATA
TCGATCGTCGTGTTTCTGAAGCGTCTACTGGGAACGGTGCGCGCATATGC
AATCATCTCGAACGTTCTGATTGCCTTTATCGCCTGTTGGGCCCTGACGG
CACTGTTGGTCAATATATTTCAATGTACGCCGGTTCAATATTACTATAAC
AAGGATCTTAAGGGACATTGCATGAGCGGTCAGCGATCCTTCTTCCAGGC
GATGGGAGCGATTTCTTTGGTTGAGGATGTCATCGTGCTGTGTCTACCCA
CGCCTATCGTTTGGGGCCTGCAGATTACTTTTCGCCAGAAAATTGCTGTG
ACGCTTGTGTTCTCGCTGGGCGGATTCTGCATTCAATGGCGTGGGTTTAC
CAGTTAGCTCTCTGCCGGCCGATGAACGGCAACGTATCCAATTCATGACT
TACGAAGAGAATCGATACTGGAAGAATGTTCTGACCATCGTGCCCATCAT
TGGTGCTGCCCTGGCCACCGTTTCGTATGTCCTGCGTCTGTATTCGCGGC
GCTTTACCACGGCCGGTTTGAAAGTGGAGGACTGGTTGATGGGCGTGGGC
CTGCTTCTTTCTTACTGCGCAACCGCCTTTGTTGTGGACA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006582-T1.utr3p1 | KJC3_006582-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006582-T1.utr5p1 | KJC3_006582-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.13 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6109490..6111430 - |
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