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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6112307..6114382+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006583-T1 ID=KJC3_006583-T1|Name=KJC3_006583-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2076bp|location=Sequence derived from alignment at ch4:6112307..6114382+ (Aspergillus niger KJC3)
CTCTCCAGCTAGCAAGCAATTTTCCCTCCACAGCCCACAACATTCCTCTC
TCGAATTTCAATAGTCTCGCATCGTATGAGACACTGAATTGGTCCGTTCA
TTCGGTTTTCTCCGAAGGTAAGAAAAATTTTCCTAATTTTGGCCCCGACC
GTTCATTCAAATGGTCGCGATCGTCGCTGTTTCCCCGTTCCCTTCCGCCA
AGTTTGTCTCACGCTCGCGTGGCAGCCCTGAAAAATGACGCCTTCGCCCT
CCAAGACCTCGTTGGCTCTTCTGGCCGTCCAATTCTTTGGACTTGGCTCC
GCCTGTGGTTGCGCATGCACTCTGGATAGCCTCAACACTACCCTTCAGGG
TCGTGTGCAGCCCTTGACTCCTTTCTCCCTCCCTTGCTTCTCCAACTACA
ACGGCCAGTCCGTCACCCCCAACGATGCCGCCTGTGCCAACATCCAGGAT
AACTACACCGATCCTTACCTTCGCACCAACTCGCCCAATGGTTACATGAA
CAATCAGGATGAGATGTGCTCGTCCAACCCCGAGGATCAATGCCTGCTCG
ACAGCAGCGATCCCACCGATCCTCTGGCTTTTGTCAACCAGACCTGCCGT
CAGGGTAATATGCCCTCCTACTACATCGAGGTGAAGGATGAAACCGATGT
CCGTCACGCTCTGCACTTCTCCAACTGCTCTGGCACCCGTCTGTCCATCA
AGAACAGTGGTCATGACTACCTGACCCGCAGCAGCGGCAAGGGTACCTTG
GCCCTGTGGACTCGCAAGCTGCAGAACCTCAGCTACAGCCCTGCCTTTGT
CCCCGATGGCTGCCAGGCCTCCTACAACGCCATCACTGCCGGTGCTGGTG
TTAACTTCGATGAAGCCTACGAGTTTGCTCACCAGAACAATGTTACCATC
CTCGGTGGTTACTCCCCTACCGTCGGTCTCTCTGGCGGTTGGGTCATGAA
CGGTGGCCACTCGGTCCTGTCCCCCGTCTATGGTCTTGGTGTCGACCGTG
TTGTCCAGTACAAGGTCGTCACTCCTGATGGCGAGCTGCGCATCGCCAAC
GAATGCCAGAACCAGGACCTCTTCTGGGCCCTGCGTGGTGGCGGTGGTGG
TACCTTTGGTGTTGTCCTCGAGAGCACTCACCGCGTCGAGTCCACCATCA
GCTTCGTGGCCGCCATCATCAAGTTCACCAGCAACTCCACCAACGTCCTG
CCCTTCATGGACATCGTTGTCAACAACACCCTGAAGTGGGCCAAGGAAGG
CTGGGGTGGTCACGTCACTGGCGACACTCTTGTCAACGTGTCCCCCCTGC
TCTCTGTCGCTGAAGCCAATGCCTCCATGGCCGAGGTCGCCGCCTACGCT
AAGGCTCAGGGTGGTTCCGCCGTCATCGAGGCCTTCTCTTCCTGGTATGA
CTTCTATCAGAAGTATGTCACCTCCAGCTCCGTCAGCGTTGGTGTCACCC
ACTTCGCTGGTAGTCGCCTGGTTCCCACCGACGTCTTCGAGACCGCCGAG
GGTCGCTCCAACCTGATGGACTTCTTCGAGCTCATCCTTGCCAACGGCCA
GACCCCCTACATCCCCGTCGTCGCCCCCATCCTGTACAACTACACCGAGG
GCTCCACCAGTGCTTCCCCCGCCTGGCGTAAGTCCGTTTGGGAGCTGGGT
TCCGGCAGCAGCTGGGCCTGGAACAGCACCCTGCAGACCCGTGAGCAGAA
GATCGCCACCCTCCAGAACATGACCGCTACCCTGGAGCGCATCACCCCCG
GCAGTGGTGCCTACAGCAACGAGGCCAATGCCTTCACTGTCGACTGGCAG
GAGGCCTGGTGGGGAGACAACTACGACAAGCTGCTCTCCATCAAGCACAA
GTATGACCCTACTGGTCTGCTGAGCTGCTGGAAGTGTGTTGGCTGGGAGG
ATTCTCAGGCTAACAGCACTTGCTTTGCTGCTTTCTCTTGAGTTACTGGC
CATTAGTCTGGTCGGTCTTAGTTGTATATATAATCAACCCCACCGGTAGT
GGGAAGACGCGATAGATATCGTTCTTGTTCAACGACTTGATCTGTATATT
ATGTCAAGCATTAGATGATACTGTAT back to topCoding sequence (CDS) from alignment at ch4:6112307..6114382+ >KJC3_006583-T1 ID=KJC3_006583-T1|Name=KJC3_006583-T1|organism=Aspergillus niger KJC3|type=CDS|length=1707bp|location=Sequence derived from alignment at ch4:6112307..6114382+ (Aspergillus niger KJC3)
ATGACGCCTTCGCCCTCCAAGACCTCGTTGGCTCTTCTGGCCGTCCAATT
CTTTGGACTTGGCTCCGCCTGTGGTTGCGCATGCACTCTGGATAGCCTCA
ACACTACCCTTCAGGGTCGTGTGCAGCCCTTGACTCCTTTCTCCCTCCCT
TGCTTCTCCAACTACAACGGCCAGTCCGTCACCCCCAACGATGCCGCCTG
TGCCAACATCCAGGATAACTACACCGATCCTTACCTTCGCACCAACTCGC
CCAATGGTTACATGAACAATCAGGATGAGATGTGCTCGTCCAACCCCGAG
GATCAATGCCTGCTCGACAGCAGCGATCCCACCGATCCTCTGGCTTTTGT
CAACCAGACCTGCCGTCAGGGTAATATGCCCTCCTACTACATCGAGGTGA
AGGATGAAACCGATGTCCGTCACGCTCTGCACTTCTCCAACTGCTCTGGC
ACCCGTCTGTCCATCAAGAACAGTGGTCATGACTACCTGACCCGCAGCAG
CGGCAAGGGTACCTTGGCCCTGTGGACTCGCAAGCTGCAGAACCTCAGCT
ACAGCCCTGCCTTTGTCCCCGATGGCTGCCAGGCCTCCTACAACGCCATC
ACTGCCGGTGCTGGTGTTAACTTCGATGAAGCCTACGAGTTTGCTCACCA
GAACAATGTTACCATCCTCGGTGGTTACTCCCCTACCGTCGGTCTCTCTG
GCGGTTGGGTCATGAACGGTGGCCACTCGGTCCTGTCCCCCGTCTATGGT
CTTGGTGTCGACCGTGTTGTCCAGTACAAGGTCGTCACTCCTGATGGCGA
GCTGCGCATCGCCAACGAATGCCAGAACCAGGACCTCTTCTGGGCCCTGC
GTGGTGGCGGTGGTGGTACCTTTGGTGTTGTCCTCGAGAGCACTCACCGC
GTCGAGTCCACCATCAGCTTCGTGGCCGCCATCATCAAGTTCACCAGCAA
CTCCACCAACGTCCTGCCCTTCATGGACATCGTTGTCAACAACACCCTGA
AGTGGGCCAAGGAAGGCTGGGGTGGTCACGTCACTGGCGACACTCTTGTC
AACGTGTCCCCCCTGCTCTCTGTCGCTGAAGCCAATGCCTCCATGGCCGA
GGTCGCCGCCTACGCTAAGGCTCAGGGTGGTTCCGCCGTCATCGAGGCCT
TCTCTTCCTGGTATGACTTCTATCAGAAGTATGTCACCTCCAGCTCCGTC
AGCGTTGGTGTCACCCACTTCGCTGGTAGTCGCCTGGTTCCCACCGACGT
CTTCGAGACCGCCGAGGGTCGCTCCAACCTGATGGACTTCTTCGAGCTCA
TCCTTGCCAACGGCCAGACCCCCTACATCCCCGTCGTCGCCCCCATCCTG
TACAACTACACCGAGGGCTCCACCAGTGCTTCCCCCGCCTGGCGTAAGTC
CGTTTGGGAGCTGGGTTCCGGCAGCAGCTGGGCCTGGAACAGCACCCTGC
AGACCCGTGAGCAGAAGATCGCCACCCTCCAGAACATGACCGCTACCCTG
GAGCGCATCACCCCCGGCAGTGGTGCCTACAGCAACGAGGCCAATGCCTT
CACTGTCGACTGGCAGGAGGCCTGGTGGGGAGACAACTACGACAAGCTGC
TCTCCATCAAGCACAAGTATGACCCTACTGGTCTGCTGAGCTGCTGGAAG
TGTGTTGGCTGGGAGGATTCTCAGGCTAACAGCACTTGCTTTGCTGCTTT
CTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006583-T1.utr3p1 | KJC3_006583-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.13 |
| Note | SECRETED:SignalP(1-23) |
| Note | SMCOG1138:FAD linked oxidase domain protein |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR006094 |
| DBxref | InterPro:IPR012951 |
| DBxref | PFAM:PF01565 |
| DBxref | PFAM:PF08031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6112307..6114382 + |
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