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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6153159..6153821- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006601-T1 ID=KJC3_006601-T1|Name=KJC3_006601-T1|organism=Aspergillus niger KJC3|type=mRNA|length=663bp|location=Sequence derived from alignment at ch4:6153159..6153821- (Aspergillus niger KJC3)
CTTGGCGTTGACGATAGAACAACTAAGAAGAGTGGAGAGCTCACTTTGGA
TGCGACCGGTATGTGGTTGTTGCCCTGCATCTAATGCCGTGGTTCTAGCG
TGCTGAGCCAACGTGCCGACTAGGTGGGTTGGGAGAACACCCAGGACAAG
CAACAACCCAGGAACTGGAAGATAGAACGTAAATGGATGGTTACCATCAT
GGTTCCCTGTTACATCTTCATTTCATCCATATCATCCTCGATGATGGCTC
CCGGTCTCGGACGAATTTCCACGAACTTTCGTATTGAGAATCAAATCGTG
TCACAACTTATGCTGTCGGTATTCATTCTTGCCTTTGCCATTGGTCCACT
GTTTTTCGGTCCCCTCTCGGAAGTGTACGGCTGTGTCCCCGTTCTACAAT
GTGCAAATATGATATTTCTTATCTTCAATATCGTCTGCGGTGTGTTCAGA
CCAAGGCCCAAATGATAGCTTTTCGGTTCTTGGCAGGGATCGGAGGCAGT
GCACCACTAACAGAAAGAATCTACAGATCGAAAACGAAGTTCCATGTGCT
GACTGTCGGAATTGCTTTCTAGATCGGTGGGCATATTCGGAGACCTGCTT
CCCTGGTGCAGCGTGGCAAATCCATGGCAATCTATACGTTGGCACCGCTG
CTGGGACCGGCGG back to topCoding sequence (CDS) from alignment at ch4:6153159..6153821- >KJC3_006601-T1 ID=KJC3_006601-T1|Name=KJC3_006601-T1|organism=Aspergillus niger KJC3|type=CDS|length=918bp|location=Sequence derived from alignment at ch4:6153159..6153821- (Aspergillus niger KJC3)
ATCGAAAACGAAGTTCCATGTGCTGACTGTCGGAATTGCTTTCTAGGTGG
GTTGGGAGAACACCCAGGACAAGCAACAACCCAGGAACTGGAAGATAGAA
CGTAAATGGATGGTTACCATCATGGTTCCCTGTTACATCTTCATTTCATC
CATATCATCCTCGATGATGGCTCCCGGTCTCGGACGAATTTCCACGAACT
TTCGTATTGAGAATCAAATCGTGTCACAACTTATGCTGTCGGTATTCATT
CTTGCCTTTGCCATTGGTCCACTGTTTTTCGGTCCCCTCTCGGAAGTATG
CGACCGATCGAAAACGAAGTTCCATGTGCTGACTGTCGGAATTGCTTTCT
AGGTGGGTTGGGAGAACACCCAGGACAAGCAACAACCCAGGAACTGGAAG
ATAGAACGTAAATGGATGGTTACCATCATGGTTCCCTGTTACATCTTCAT
TTCATCCATATCATCCTCGATGATGGCTCCCGGTCTCGGACGAATTTCCA
CGAACTTTCGTATTGAGAATCAAATCGTGTCACAACTTATGCTGTCGGTA
TTCATTCTTGCCTTTGCCATTGGTCCACTGTTTTTCGGTCCCCTCTCGGA
AGTATGCGACCGATCGAAAACGAAGTTCCATGTGCTGACTGTCGGAATTG
CTTTCTAGGTGGGTTGGGAGAACACCCAGGACAAGCAACAACCCAGGAAC
TGGAAGATAGAACGTAAATGGATGGTTACCATCATGGTTCCCTGTTACAT
CTTCATTTCATCCATATCATCCTCGATGATGGCTCCCGGTCTCGGACGAA
TTTCCACGAACTTTCGTATTGAGAATCAAATCGTGTCACAACTTATGCTG
TCGGTATTCATTCTTGCCTTTGCCATTGGTCCACTGTTTTTCGGTCCCCT
CTCGGAAGTATGCGACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006601-T1.utr3p1 | KJC3_006601-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006601-T1.utr5p1 | KJC3_006601-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.14 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6153159..6153821 - |
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