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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6171859..6173418- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006609-T1 ID=KJC3_006609-T1|Name=KJC3_006609-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1560bp|location=Sequence derived from alignment at ch4:6171859..6173418- (Aspergillus niger KJC3)
CCCATGCAACCCCCCCTTCCCCCCTTGACTCTTCAGGCTGAGAGACCTCG
TTGTCGGTCTCCCTCCCCTCCCCTCCTGCTGCCCGGATGAACCACCATGC
CTCAAATCCCGGCGGACATCCAAACTGCTGAGGCGGAGGGCCGCATCCCT
GCCGGTGTCACGGCCGACTATCTGGCCCAGTCGCGCGATCGGCCCACCAA
GATCGCCATCCTCTTCGTTGGCGCCCTGACCTTCGTGATCGTCGTCGCCC
GTTGCTACGCCCGTCTCTTTCTCGTCAAGAAGTTCGGCTGGGATGATGCG
TTGGCCGTCTTTACTCTGGTAGCTTCTTCCTCCTCCCCCGTATCCGCCAT
GGCAGATTGAATCGAATGGAATTGACTCGCAGCCGCATTAGGCCATCTAC
ATCGCCATTATCGCCCTGTCCATCATTCTGATCGACATGGGCAGTGGCCG
GCACATTGAATATATCCAATATGTCCTCGCCCTGTCCCGCGTCAACGACA
CCGAACGCTACGACTTTGTCATGCACATCCTCTACACCACCGCCTTGTTC
GTCTGTCGCCTATCCGGTTTGGCCTTCTACCAGCGTCTGGCCTCGCGTCA
CCCCAAGATCTCCCTGGCCATCAAGCTCTCCGCAGGGTTCTTGCTGGCCG
CGTTTCTCGCCCAATTCTTTCTCCTGCTGTTCCATTGTCTGCCCGTCACG
GGTCTCTGGCCCTACCCCTGGCAGCCGCAGATCGACAATTACAAGTGCAT
CACATGGGGGGATGTGTATGTGACCAATTCGGCCCTCTCCCTGGTCTGCG
ACGTGATGATGTTGGCCCTGCCCTCCATGTTGATCTACATGCTGCAAGTG
TCGCCGAAGCGCAAACTGCAGTTGTCCCTGATCATGTTCCCGGGTGTCTT
GTGAGTCTACATCTTCCTCTGTGTGTTTCTCATGTCTCCTTGCTAATGCA
AACCCCTCTGCTAGGGTGCTTGTCATCTCCTGCGTCCGCTTATGGCTGGT
CATCGTCGGCCAGTGGTCCTCCGACGGCAGTTGGGCCTACGACCCCATGC
TGGCCATCGAAACCTCCGAAATCGGCGGCACCCTGATCGCCCTCTCCATT
CCCGCCATGAAATCTTTATTCGGGTCGTGGTTTTCGCACCTCAAGGCATA
CTCCTCGCGAGCGGGAGGAACCAGCGGCAAGCCCAGTGGAGCGCAACGGG
CATACGGACGCAGCTGGGAAACCGGGGTCAAACTCAGCAGTCTGGGGACC
CGCACGGCCGCCGACGACGCATACAAGGTCAACATTGGCGTGGGAGGGGA
TCCCAGCCTGCGGGGACCCACCAGCGAGGGGACGAAGCATTCGCGCAACG
ATGGGTCGTCGGAGGATCTACTGATGGACGTCAGCTTCTCGCCGGAGGAA
CGACAATTGGCCTTCAAGAACGGGATCCGCCTGACGGAGGAAGTGTCCAT
ATCGTCGTCGCGGGTGTCGAGGCTGCCGCATTTATCGCGGTAGGCAACTA
GAAAAAAAATACTAATAATAATAACACGACACAAAAAAGCAATTACTATA
ATAGAGCGGT back to topCoding sequence (CDS) from alignment at ch4:6171859..6173418- >KJC3_006609-T1 ID=KJC3_006609-T1|Name=KJC3_006609-T1|organism=Aspergillus niger KJC3|type=CDS|length=3780bp|location=Sequence derived from alignment at ch4:6171859..6173418- (Aspergillus niger KJC3)
GGTGCTTGTCATCTCCTGCGTCCGCTTATGGCTGGTCATCGTCGGCCAGT
GGTCCTCCGACGGCAGTTGGGCCTACGACCCCATGCTGGCCATCGAAACC
TCCGAAATCGGCGGCACCCTGATCGCCCTCTCCATTCCCGCCATGAAATC
TTTATTCGGGTCGTGGTTTTCGCACCTCAAGGCATACTCCTCGCGAGCGG
GAGGAACCAGCGGCAAGCCCAGTGGAGCGCAACGGGCATACGGACGCAGC
TGGGAAACCGGGGTCAAACTCAGCAGTCTGGGGACCCGCACGGCCGCCGA
CGACGCATACAAGGTCAACATTGGCGTGGGAGGGGATCCCAGCCTGCGGG
GACCCACCAGCGAGGGGACGAAGCATTCGCGCAACGATGGGTCGTCGGAG
GATCTACTGATGGACGTCAGCTTCTCGCCGGAGGAACGACAATTGGCCTT
CAAGAACGGGATCCGCCTGACGGAGGAAGTGTCCATATCGTCGTCGCGGG
TGTCGAGGCTGCCGCATTTATCGCGGTAGGCCATCTACATCGCCATTATC
GCCCTGTCCATCATTCTGATCGACATGGGCAGTGGCCGGCACATTGAATA
TATCCAATATGTCCTCGCCCTGTCCCGCGTCAACGACACCGAACGCTACG
ACTTTGTCATGCACATCCTCTACACCACCGCCTTGTTCGTCTGTCGCCTA
TCCGGTTTGGCCTTCTACCAGCGTCTGGCCTCGCGTCACCCCAAGATCTC
CCTGGCCATCAAGCTCTCCGCAGGGTTCTTGCTGGCCGCGTTTCTCGCCC
AATTCTTTCTCCTGCTGTTCCATTGTCTGCCCGTCACGGGTCTCTGGCCC
TACCCCTGGCAGCCGCAGATCGACAATTACAAGTGCATCACATGGGGGGA
TGTGTATGTGACCAATTCGGCCCTCTCCCTGGTCTGCGACGTGATGATGT
TGGCCCTGCCCTCCATGTTGATCTACATGCTGCAAGTGTCGCCGAAGCGC
AAACTGCAGTTGTCCCTGATCATGTTCCCGGGTGTCTTATGCCTCAAATC
CCGGCGGACATCCAAACTGCTGAGGCGGAGGGCCGCATCCCTGCCGGTGT
CACGGCCGACTATCTGGCCCAGTCGCGCGATCGGCCCACCAAGATCGCCA
TCCTCTTCGTTGGCGCCCTGACCTTCGTGATCGTCGTCGCCCGTTGCTAC
GCCCGTCTCTTTCTCGTCAAGAAGTTCGGCTGGGATGATGCGTTGGCCGT
CTTTACTCTGGGTGCTTGTCATCTCCTGCGTCCGCTTATGGCTGGTCATC
GTCGGCCAGTGGTCCTCCGACGGCAGTTGGGCCTACGACCCCATGCTGGC
CATCGAAACCTCCGAAATCGGCGGCACCCTGATCGCCCTCTCCATTCCCG
CCATGAAATCTTTATTCGGGTCGTGGTTTTCGCACCTCAAGGCATACTCC
TCGCGAGCGGGAGGAACCAGCGGCAAGCCCAGTGGAGCGCAACGGGCATA
CGGACGCAGCTGGGAAACCGGGGTCAAACTCAGCAGTCTGGGGACCCGCA
CGGCCGCCGACGACGCATACAAGGTCAACATTGGCGTGGGAGGGGATCCC
AGCCTGCGGGGACCCACCAGCGAGGGGACGAAGCATTCGCGCAACGATGG
GTCGTCGGAGGATCTACTGATGGACGTCAGCTTCTCGCCGGAGGAACGAC
AATTGGCCTTCAAGAACGGGATCCGCCTGACGGAGGAAGTGTCCATATCG
TCGTCGCGGGTGTCGAGGCTGCCGCATTTATCGCGGTAGGCCATCTACAT
CGCCATTATCGCCCTGTCCATCATTCTGATCGACATGGGCAGTGGCCGGC
ACATTGAATATATCCAATATGTCCTCGCCCTGTCCCGCGTCAACGACACC
GAACGCTACGACTTTGTCATGCACATCCTCTACACCACCGCCTTGTTCGT
CTGTCGCCTATCCGGTTTGGCCTTCTACCAGCGTCTGGCCTCGCGTCACC
CCAAGATCTCCCTGGCCATCAAGCTCTCCGCAGGGTTCTTGCTGGCCGCG
TTTCTCGCCCAATTCTTTCTCCTGCTGTTCCATTGTCTGCCCGTCACGGG
TCTCTGGCCCTACCCCTGGCAGCCGCAGATCGACAATTACAAGTGCATCA
CATGGGGGGATGTGTATGTGACCAATTCGGCCCTCTCCCTGGTCTGCGAC
GTGATGATGTTGGCCCTGCCCTCCATGTTGATCTACATGCTGCAAGTGTC
GCCGAAGCGCAAACTGCAGTTGTCCCTGATCATGTTCCCGGGTGTCTTAT
GCCTCAAATCCCGGCGGACATCCAAACTGCTGAGGCGGAGGGCCGCATCC
CTGCCGGTGTCACGGCCGACTATCTGGCCCAGTCGCGCGATCGGCCCACC
AAGATCGCCATCCTCTTCGTTGGCGCCCTGACCTTCGTGATCGTCGTCGC
CCGTTGCTACGCCCGTCTCTTTCTCGTCAAGAAGTTCGGCTGGGATGATG
CGTTGGCCGTCTTTACTCTGGGTGCTTGTCATCTCCTGCGTCCGCTTATG
GCTGGTCATCGTCGGCCAGTGGTCCTCCGACGGCAGTTGGGCCTACGACC
CCATGCTGGCCATCGAAACCTCCGAAATCGGCGGCACCCTGATCGCCCTC
TCCATTCCCGCCATGAAATCTTTATTCGGGTCGTGGTTTTCGCACCTCAA
GGCATACTCCTCGCGAGCGGGAGGAACCAGCGGCAAGCCCAGTGGAGCGC
AACGGGCATACGGACGCAGCTGGGAAACCGGGGTCAAACTCAGCAGTCTG
GGGACCCGCACGGCCGCCGACGACGCATACAAGGTCAACATTGGCGTGGG
AGGGGATCCCAGCCTGCGGGGACCCACCAGCGAGGGGACGAAGCATTCGC
GCAACGATGGGTCGTCGGAGGATCTACTGATGGACGTCAGCTTCTCGCCG
GAGGAACGACAATTGGCCTTCAAGAACGGGATCCGCCTGACGGAGGAAGT
GTCCATATCGTCGTCGCGGGTGTCGAGGCTGCCGCATTTATCGCGGTAGG
CCATCTACATCGCCATTATCGCCCTGTCCATCATTCTGATCGACATGGGC
AGTGGCCGGCACATTGAATATATCCAATATGTCCTCGCCCTGTCCCGCGT
CAACGACACCGAACGCTACGACTTTGTCATGCACATCCTCTACACCACCG
CCTTGTTCGTCTGTCGCCTATCCGGTTTGGCCTTCTACCAGCGTCTGGCC
TCGCGTCACCCCAAGATCTCCCTGGCCATCAAGCTCTCCGCAGGGTTCTT
GCTGGCCGCGTTTCTCGCCCAATTCTTTCTCCTGCTGTTCCATTGTCTGC
CCGTCACGGGTCTCTGGCCCTACCCCTGGCAGCCGCAGATCGACAATTAC
AAGTGCATCACATGGGGGGATGTGTATGTGACCAATTCGGCCCTCTCCCT
GGTCTGCGACGTGATGATGTTGGCCCTGCCCTCCATGTTGATCTACATGC
TGCAAGTGTCGCCGAAGCGCAAACTGCAGTTGTCCCTGATCATGTTCCCG
GGTGTCTTATGCCTCAAATCCCGGCGGACATCCAAACTGCTGAGGCGGAG
GGCCGCATCCCTGCCGGTGTCACGGCCGACTATCTGGCCCAGTCGCGCGA
TCGGCCCACCAAGATCGCCATCCTCTTCGTTGGCGCCCTGACCTTCGTGA
TCGTCGTCGCCCGTTGCTACGCCCGTCTCTTTCTCGTCAAGAAGTTCGGC
TGGGATGATGCGTTGGCCGTCTTTACTCTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006609-T1.utr3p1 | KJC3_006609-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006609-T1.utr5p1 | KJC3_006609-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.14 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6171859..6173418 - |
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