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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:6183274..6184852- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006613-T1 ID=KJC3_006613-T1|Name=KJC3_006613-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1579bp|location=Sequence derived from alignment at ch4:6183274..6184852- (Aspergillus niger KJC3)
CAAGTGTCACCAGCAAGGCACAAGCAAAACGAACCCCGATCCAGACCTTT
CACAATACCCATTGTGGTCTTGCCCGGGAGAGAGATTGGGTTCACTCGCC
CCAATGAGGGTTCCACTGCCCATTAATGAGGATTGTCGGCTTTTCTCATC
CTTCGCGACGGCTCTGAAATCCTGCATTAGGCGTTGACGCCCCTGTTCCT
GCAGGACTGTTCGGCAGACAAAATCCCGTCCATGTCCTACCCACCAGATA
TCTAAAGAACCCGCCGTGTCTGCTTCTCTCGATGTTGCCTCGCCTTGCTG
TAGCGGCCCAGCGTCTGCCATGGCGTCGACCAGCACACTTGAACTAACGC
CAGAGTTCCTGGCGCAGGATCGACGCCCGCAGGCGAGGATCGGAATCGGC
GTCGTGACGGCATTGTCTGGCGTTATCGTCCTGATTCGAGTCTATGCGCG
ATGGTTCATGATCCGCAGTTTCGGGTGGGATGACGGACTCATCTGCATAG
CGATGGTAGGATACCCAAAATCCACTACTTGTGCACAAATTCTGACAACT
GTCGTATTGACAGTTATTAAACATCGCCGTCATGGCCCTCACCACACAAG
TCCTCCGCTACGGCGCCGGCCTGCACATCTGGGCCCTCGATACCGCCGAA
ACCCCGCTGCTCTACAAATGGCTCGTCGCTGCGCAGCTGGTATACATGAT
CGCATTGTGGACGTGTCGACTCTCCGGTCTGGCCTTCTACCGTCGATTGA
ATCCCATGCCTCAGTTCCAACTCTACCTCCAGATCTCCTTTGCATTCGTC
ACGGCCGTCATGCTCGCCCAGGTGCTTATCATTGCCCTGCAATGTATCCC
GCTAGCTGCGCTCTGGGGCGGCGCTACCGGAAAGTGTCTGGGATCGAAAA
CGGTGTTTATTTCCACTGCCGCGATGACCATCATCTGCGACTCGCTGATC
TTGCTGTTGCCGGTCAAGATTGTGTTTTCTATCAAGGCGAATGCAACGCG
CAAGGCGGCGTTGAGTGTGGTGTTGTGTTTTGGTGTTTTGTAGGTGTTAC
ATCATCTGTCCAGTTTCCTCAATGGCTACTTACTTACTTACTAACCTTGC
TTGGTTTCTAGTGCCGTGATGTGAGTAACCATAGTTTCAGATACATACAA
CCGATATATTTGACTCAACTAACTAACGAAACCAGGACCTCTGTCGCCCG
CATCATCTCCATGATCCCCGCCATTCAGAAAACCGACGCAACCTGGTACT
TCTCGGTCGTGATGGTCTGGTCCGATACCGAAGTTAGCACGGCTATTATC
GCCCTGTCGTTGCCGGCGTTAAAGGGACTAGTCGGTGCTGTGGCGGGCAG
CACGCGGAAGGGAACTGATCAGACACCAGGGAGTAATGGGGGTCCGGATC
TGCATTTGCAGAATGTGCATGCTGGGGGCGGCCATCGCCTCTATGAAGGG
CCGGAAAGTTACCCCAACGAGGCGCGGGCTGGTCTTGGGGATAATGCGAG
CCAGGAGGCGTTGTGGGTGGATACGACGGCTAGGATTCATGTGAAGAATA
GTGTGCGGGTTAGTGTGAGTGATCGATGA back to topCoding sequence (CDS) from alignment at ch4:6183274..6184852- >KJC3_006613-T1 ID=KJC3_006613-T1|Name=KJC3_006613-T1|organism=Aspergillus niger KJC3|type=CDS|length=4260bp|location=Sequence derived from alignment at ch4:6183274..6184852- (Aspergillus niger KJC3)
GACCTCTGTCGCCCGCATCATCTCCATGATCCCCGCCATTCAGAAAACCG
ACGCAACCTGGTACTTCTCGGTCGTGATGGTCTGGTCCGATACCGAAGTT
AGCACGGCTATTATCGCCCTGTCGTTGCCGGCGTTAAAGGGACTAGTCGG
TGCTGTGGCGGGCAGCACGCGGAAGGGAACTGATCAGACACCAGGGAGTA
ATGGGGGTCCGGATCTGCATTTGCAGAATGTGCATGCTGGGGGCGGCCAT
CGCCTCTATGAAGGGCCGGAAAGTTACCCCAACGAGGCGCGGGCTGGTCT
TGGGGATAATGCGAGCCAGGAGGCGTTGTGGGTGGATACGACGGCTAGGA
TTCATGTGAAGAATAGTGTGCGGGTTAGTGTGAGTGATCGATGATGCCGT
GATTTATTAAACATCGCCGTCATGGCCCTCACCACACAAGTCCTCCGCTA
CGGCGCCGGCCTGCACATCTGGGCCCTCGATACCGCCGAAACCCCGCTGC
TCTACAAATGGCTCGTCGCTGCGCAGCTGGTATACATGATCGCATTGTGG
ACGTGTCGACTCTCCGGTCTGGCCTTCTACCGTCGATTGAATCCCATGCC
TCAGTTCCAACTCTACCTCCAGATCTCCTTTGCATTCGTCACGGCCGTCA
TGCTCGCCCAGGTGCTTATCATTGCCCTGCAATGTATCCCGCTAGCTGCG
CTCTGGGGCGGCGCTACCGGAAAGTGTCTGGGATCGAAAACGGTGTTTAT
TTCCACTGCCGCGATGACCATCATCTGCGACTCGCTGATCTTGCTGTTGC
CGGTCAAGATTGTGTTTTCTATCAAGGCGAATGCAACGCGCAAGGCGGCG
TTGAGTGTGGTGTTGTGTTTTGGTGTTTTATGGCGTCGACCAGCACACTT
GAACTAACGCCAGAGTTCCTGGCGCAGGATCGACGCCCGCAGGCGAGGAT
CGGAATCGGCGTCGTGACGGCATTGTCTGGCGTTATCGTCCTGATTCGAG
TCTATGCGCGATGGTTCATGATCCGCAGTTTCGGGTGGGATGACGGACTC
ATCTGCATAGCGATGGACCTCTGTCGCCCGCATCATCTCCATGATCCCCG
CCATTCAGAAAACCGACGCAACCTGGTACTTCTCGGTCGTGATGGTCTGG
TCCGATACCGAAGTTAGCACGGCTATTATCGCCCTGTCGTTGCCGGCGTT
AAAGGGACTAGTCGGTGCTGTGGCGGGCAGCACGCGGAAGGGAACTGATC
AGACACCAGGGAGTAATGGGGGTCCGGATCTGCATTTGCAGAATGTGCAT
GCTGGGGGCGGCCATCGCCTCTATGAAGGGCCGGAAAGTTACCCCAACGA
GGCGCGGGCTGGTCTTGGGGATAATGCGAGCCAGGAGGCGTTGTGGGTGG
ATACGACGGCTAGGATTCATGTGAAGAATAGTGTGCGGGTTAGTGTGAGT
GATCGATGATGCCGTGATTTATTAAACATCGCCGTCATGGCCCTCACCAC
ACAAGTCCTCCGCTACGGCGCCGGCCTGCACATCTGGGCCCTCGATACCG
CCGAAACCCCGCTGCTCTACAAATGGCTCGTCGCTGCGCAGCTGGTATAC
ATGATCGCATTGTGGACGTGTCGACTCTCCGGTCTGGCCTTCTACCGTCG
ATTGAATCCCATGCCTCAGTTCCAACTCTACCTCCAGATCTCCTTTGCAT
TCGTCACGGCCGTCATGCTCGCCCAGGTGCTTATCATTGCCCTGCAATGT
ATCCCGCTAGCTGCGCTCTGGGGCGGCGCTACCGGAAAGTGTCTGGGATC
GAAAACGGTGTTTATTTCCACTGCCGCGATGACCATCATCTGCGACTCGC
TGATCTTGCTGTTGCCGGTCAAGATTGTGTTTTCTATCAAGGCGAATGCA
ACGCGCAAGGCGGCGTTGAGTGTGGTGTTGTGTTTTGGTGTTTTATGGCG
TCGACCAGCACACTTGAACTAACGCCAGAGTTCCTGGCGCAGGATCGACG
CCCGCAGGCGAGGATCGGAATCGGCGTCGTGACGGCATTGTCTGGCGTTA
TCGTCCTGATTCGAGTCTATGCGCGATGGTTCATGATCCGCAGTTTCGGG
TGGGATGACGGACTCATCTGCATAGCGATGGACCTCTGTCGCCCGCATCA
TCTCCATGATCCCCGCCATTCAGAAAACCGACGCAACCTGGTACTTCTCG
GTCGTGATGGTCTGGTCCGATACCGAAGTTAGCACGGCTATTATCGCCCT
GTCGTTGCCGGCGTTAAAGGGACTAGTCGGTGCTGTGGCGGGCAGCACGC
GGAAGGGAACTGATCAGACACCAGGGAGTAATGGGGGTCCGGATCTGCAT
TTGCAGAATGTGCATGCTGGGGGCGGCCATCGCCTCTATGAAGGGCCGGA
AAGTTACCCCAACGAGGCGCGGGCTGGTCTTGGGGATAATGCGAGCCAGG
AGGCGTTGTGGGTGGATACGACGGCTAGGATTCATGTGAAGAATAGTGTG
CGGGTTAGTGTGAGTGATCGATGATGCCGTGATTTATTAAACATCGCCGT
CATGGCCCTCACCACACAAGTCCTCCGCTACGGCGCCGGCCTGCACATCT
GGGCCCTCGATACCGCCGAAACCCCGCTGCTCTACAAATGGCTCGTCGCT
GCGCAGCTGGTATACATGATCGCATTGTGGACGTGTCGACTCTCCGGTCT
GGCCTTCTACCGTCGATTGAATCCCATGCCTCAGTTCCAACTCTACCTCC
AGATCTCCTTTGCATTCGTCACGGCCGTCATGCTCGCCCAGGTGCTTATC
ATTGCCCTGCAATGTATCCCGCTAGCTGCGCTCTGGGGCGGCGCTACCGG
AAAGTGTCTGGGATCGAAAACGGTGTTTATTTCCACTGCCGCGATGACCA
TCATCTGCGACTCGCTGATCTTGCTGTTGCCGGTCAAGATTGTGTTTTCT
ATCAAGGCGAATGCAACGCGCAAGGCGGCGTTGAGTGTGGTGTTGTGTTT
TGGTGTTTTATGGCGTCGACCAGCACACTTGAACTAACGCCAGAGTTCCT
GGCGCAGGATCGACGCCCGCAGGCGAGGATCGGAATCGGCGTCGTGACGG
CATTGTCTGGCGTTATCGTCCTGATTCGAGTCTATGCGCGATGGTTCATG
ATCCGCAGTTTCGGGTGGGATGACGGACTCATCTGCATAGCGATGGACCT
CTGTCGCCCGCATCATCTCCATGATCCCCGCCATTCAGAAAACCGACGCA
ACCTGGTACTTCTCGGTCGTGATGGTCTGGTCCGATACCGAAGTTAGCAC
GGCTATTATCGCCCTGTCGTTGCCGGCGTTAAAGGGACTAGTCGGTGCTG
TGGCGGGCAGCACGCGGAAGGGAACTGATCAGACACCAGGGAGTAATGGG
GGTCCGGATCTGCATTTGCAGAATGTGCATGCTGGGGGCGGCCATCGCCT
CTATGAAGGGCCGGAAAGTTACCCCAACGAGGCGCGGGCTGGTCTTGGGG
ATAATGCGAGCCAGGAGGCGTTGTGGGTGGATACGACGGCTAGGATTCAT
GTGAAGAATAGTGTGCGGGTTAGTGTGAGTGATCGATGATGCCGTGATTT
ATTAAACATCGCCGTCATGGCCCTCACCACACAAGTCCTCCGCTACGGCG
CCGGCCTGCACATCTGGGCCCTCGATACCGCCGAAACCCCGCTGCTCTAC
AAATGGCTCGTCGCTGCGCAGCTGGTATACATGATCGCATTGTGGACGTG
TCGACTCTCCGGTCTGGCCTTCTACCGTCGATTGAATCCCATGCCTCAGT
TCCAACTCTACCTCCAGATCTCCTTTGCATTCGTCACGGCCGTCATGCTC
GCCCAGGTGCTTATCATTGCCCTGCAATGTATCCCGCTAGCTGCGCTCTG
GGGCGGCGCTACCGGAAAGTGTCTGGGATCGAAAACGGTGTTTATTTCCA
CTGCCGCGATGACCATCATCTGCGACTCGCTGATCTTGCTGTTGCCGGTC
AAGATTGTGTTTTCTATCAAGGCGAATGCAACGCGCAAGGCGGCGTTGAG
TGTGGTGTTGTGTTTTGGTGTTTTATGGCGTCGACCAGCACACTTGAACT
AACGCCAGAGTTCCTGGCGCAGGATCGACGCCCGCAGGCGAGGATCGGAA
TCGGCGTCGTGACGGCATTGTCTGGCGTTATCGTCCTGATTCGAGTCTAT
GCGCGATGGTTCATGATCCGCAGTTTCGGGTGGGATGACGGACTCATCTG
CATAGCGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006613-T1.utr5p1 | KJC3_006613-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.14 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:6183274..6184852 - |
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