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KJC3_006625-T2, KJC3_006625-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006625-T2
Unique NameKJC3_006625-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6207848..6208678-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006625-T2 ID=KJC3_006625-T2|Name=KJC3_006625-T2|organism=Aspergillus niger KJC3|type=mRNA|length=831bp|location=Sequence derived from alignment at ch4:6207848..6208678- (Aspergillus niger KJC3)
ACCCGCATATCCCGCCACATCCACATCACCACTAAAATCGCCAAACAATT
GTAGATATGCCTGTCTTCCACGTCGGTGCGTCTCTCCGCCCTCATCCATC
TCGAATCGCTACGCAGGAACCTAACATGTCGGCCAGTCCTCTTCCGCTTG
AAGCCAGGTGTCCCGGCTAGCGAGCTCGAGGCCTGGGCCCGCCTGGGTAA
AGCCATGGTTGGCAAGATTCCAGGTCAGTACTTACCTTCAAGATTGTGAA
GGCAACTGGGATACTGATACGTGACATGCTGCCAGGACTGCTGGAGTTCC
ATGCCAACCCCCCGTTGGCGATGACTGCGTCCCGCGCAAAGGGCTACAAT
ATGGGCTTGGTGGCTATTCTGGAGAAGCCGTCAGATCTGCAGGTCTATGC
AACTCACCCAGCTCACCTCGAGTCAGTCTGCCTGTAGCTGTGGGAACCTC
GGTCTGCAAATGAATGGTAGCTAACGGTCTATCAGGTTGCATGAAAAGCG
CGAGCAATTGTGTGAGGATACTTTGGCGTATGATCTGGAGTACTAGACTT
CCCGCGTGTAGGAGTGGTTAAAGGAAATGGTGTGATGGGAATGTCCTACA
CTAGGGGCAGGCCAGACCACATGATCGCCTTGGTAGCTGCACCCTGACAA
TTTTTGTGCAATTATTCCTCGTCGGTGCATGATTCTGCAGCTGCTTACAT
GCTATGGATGCGTTGGGCTCCTGGTGCGTAATGATAGACGAGATAATGGG
TTGAAGAGCAAACCCGCAATCCAGGGTCTATTATCATGTATATATTGCCA
GAATACATGTGTGACAATTGTACAATCCCTC
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Coding sequence (CDS) from alignment at ch4:6207848..6208678-

>KJC3_006625-T2 ID=KJC3_006625-T2|Name=KJC3_006625-T2|organism=Aspergillus niger KJC3|type=CDS|length=648bp|location=Sequence derived from alignment at ch4:6207848..6208678- (Aspergillus niger KJC3)
GTTGCATGAAAAGCGCGAGCAATTGTGTGAGGATACTTTGGCGTATGATC
TGGAGTACTAGGACTGCTGGAGTTCCATGCCAACCCCCCGTTGGCGATGA
CTGCGTCCCGCGCAAAGGGCTACAATATGGGCTTGGTGGCTATTCTGGAG
AAGCCGTCAGATCTGCAGGTCTATGCAACTCACCCAGCTCACCTCGAATG
GTTGGCAAGATTCCAGGTTGCATGAAAAGCGCGAGCAATTGTGTGAGGAT
ACTTTGGCGTATGATCTGGAGTACTAGGACTGCTGGAGTTCCATGCCAAC
CCCCCGTTGGCGATGACTGCGTCCCGCGCAAAGGGCTACAATATGGGCTT
GGTGGCTATTCTGGAGAAGCCGTCAGATCTGCAGGTCTATGCAACTCACC
CAGCTCACCTCGAATGGTTGGCAAGATTCCAGGTTGCATGAAAAGCGCGA
GCAATTGTGTGAGGATACTTTGGCGTATGATCTGGAGTACTAGGACTGCT
GGAGTTCCATGCCAACCCCCCGTTGGCGATGACTGCGTCCCGCGCAAAGG
GCTACAATATGGGCTTGGTGGCTATTCTGGAGAAGCCGTCAGATCTGCAG
GTCTATGCAACTCACCCAGCTCACCTCGAATGGTTGGCAAGATTCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006625KJC3_006625Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006625-T2KJC3_006625-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006625-T2.cdsKJC3_006625-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006625-T2.utr3p1KJC3_006625-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006625-T2.exon3KJC3_006625-T2.exon3Aspergillus niger KJC3exon
KJC3_006625-T2.exon2KJC3_006625-T2.exon2Aspergillus niger KJC3exon
KJC3_006625-T2.exon1KJC3_006625-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006625-T2.utr5p1KJC3_006625-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR013097
DBxrefPFAM:PF07876
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6207848..6208678 -
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