You are here

Home

KJC3_006645-T1, KJC3_006645-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006645-T1
Unique NameKJC3_006645-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:6260549..6261427-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006645-T1 ID=KJC3_006645-T1|Name=KJC3_006645-T1|organism=Aspergillus niger KJC3|type=mRNA|length=879bp|location=Sequence derived from alignment at ch4:6260549..6261427- (Aspergillus niger KJC3)
ATGACTAAAAAGCTTACTGTCCTCATTACCGGCTGCTCTGATGGCGGTCT
CGGCTCTCATCTTGCTCTCCCATTTCAGGCAGCTGGATGGCGCGTCTTTG
CCACAGCTCGAAATTTGTCCAAGCTCAAGGAGGCCAAGAAGTCAGGCCTC
GAAATACTTCACCTCGACACCTTGTCTGATGACTCCATCTACAAGTGCGT
TTCTGAGGTTAGCGAGCTAACTGGCGGATCACTTGATGCGCTAGTCAATA
ACGCTGGCGCTGGATACTCAATGCCAGTCATGGATATTGATATTCAGAAG
GGACGTGATCTTTTCGAGCTCAATGTCTGGTCCATCATCAGTGTGTCGCG
GGCCTTCCTTCCCCTTCTTATGAGATCAACTCGCGAGGGTGGTGCTCTGC
TCGTTAATCACGGCTCTCTCTCCGGAACCATTGCAGCCACAGGCCCATTC
GCAGGCGTATACAACGCCTCCAAGGCAGCGGCAGCCAGCTTTACGGAGAA
CCTACGTTTGGAGCTCCAGCCGTGGAATATCAGAGTCATAAACCTGCTAA
CGGGTGCTGTCCGATCAAACTTTCATGTCAATGCGCCACGTCCCGAATTG
CCACCAGATTCGCTATTCAATATTGCCAAAGATATAGTTGAACAGGCTAT
GGATAATTCGGATGATTCTGGTGATACTGATCCTGCCACATGGGCGCGGG
AGGTTGTGCAGGAACTCAGCAAACGCAGCCCAGCATATTGGATCTGGCGT
GGCAGGTTCTCGACGTTAGTGAGAATCGGTAACATACTGCCACTGGGATT
CTTCGATCGCATTATGAAAAACATGGTAGGACTGGACGTGATCGAGCAAA
GGGTTAAGCGACAACGGTCTACTTCTTGA
back to top

Coding sequence (CDS) from alignment at ch4:6260549..6261427-

>KJC3_006645-T1 ID=KJC3_006645-T1|Name=KJC3_006645-T1|organism=Aspergillus niger KJC3|type=CDS|length=879bp|location=Sequence derived from alignment at ch4:6260549..6261427- (Aspergillus niger KJC3)
ATGACTAAAAAGCTTACTGTCCTCATTACCGGCTGCTCTGATGGCGGTCT
CGGCTCTCATCTTGCTCTCCCATTTCAGGCAGCTGGATGGCGCGTCTTTG
CCACAGCTCGAAATTTGTCCAAGCTCAAGGAGGCCAAGAAGTCAGGCCTC
GAAATACTTCACCTCGACACCTTGTCTGATGACTCCATCTACAAGTGCGT
TTCTGAGGTTAGCGAGCTAACTGGCGGATCACTTGATGCGCTAGTCAATA
ACGCTGGCGCTGGATACTCAATGCCAGTCATGGATATTGATATTCAGAAG
GGACGTGATCTTTTCGAGCTCAATGTCTGGTCCATCATCAGTGTGTCGCG
GGCCTTCCTTCCCCTTCTTATGAGATCAACTCGCGAGGGTGGTGCTCTGC
TCGTTAATCACGGCTCTCTCTCCGGAACCATTGCAGCCACAGGCCCATTC
GCAGGCGTATACAACGCCTCCAAGGCAGCGGCAGCCAGCTTTACGGAGAA
CCTACGTTTGGAGCTCCAGCCGTGGAATATCAGAGTCATAAACCTGCTAA
CGGGTGCTGTCCGATCAAACTTTCATGTCAATGCGCCACGTCCCGAATTG
CCACCAGATTCGCTATTCAATATTGCCAAAGATATAGTTGAACAGGCTAT
GGATAATTCGGATGATTCTGGTGATACTGATCCTGCCACATGGGCGCGGG
AGGTTGTGCAGGAACTCAGCAAACGCAGCCCAGCATATTGGATCTGGCGT
GGCAGGTTCTCGACGTTAGTGAGAATCGGTAACATACTGCCACTGGGATT
CTTCGATCGCATTATGAAAAACATGGTAGGACTGGACGTGATCGAGCAAA
GGGTTAAGCGACAACGGTCTACTTCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006645KJC3_006645Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006645-T1.cdsKJC3_006645-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006645-T1.exon1KJC3_006645-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006645-T1KJC3_006645-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:6260549..6261427 -
Powered by Drupal