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KJC3_006678-T1, KJC3_006678-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006678-T1
Unique NameKJC3_006678-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:68051..68931+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006678-T1 ID=KJC3_006678-T1|Name=KJC3_006678-T1|organism=Aspergillus niger KJC3|type=mRNA|length=881bp|location=Sequence derived from alignment at ch5:68051..68931+ (Aspergillus niger KJC3)
ATGCTCATCGACGGCGAAAAGTGGGCATGTGAAGCTTGTGTCCGCGGCCA
TCGTGTGACCACCTGCAAACACAATGGTAATTATTCTCTTCTCCTCCATC
GTATTTCTGGTCTCCCTCCGTCCATGCTCACCGTGATACACACATCAAGA
TCGACCCCTAATCCGCATCAACCGCAAAGGTCGTCCCTTTGCGACCTGCT
CCATCTGCAACTGCACTCCCTGCGAAAGCCCCGAAGAGCACGCCAAGCTC
AAACGTGAGACCGAACATCATCATCCTTCTTCATCCTCAAAAGTACACGT
TCACCATACTTTCCACATCACATGATTTCCACCCATGGGGCAATGGCTTT
TGGTGCAGTTCAGGCTGATATAGTGGCTTCTAGCGAGCTGCTGGCCGTTC
TCCGCGACTCTCGGCGTCTCCGACGACCTTTTTACCCATTGCGCCGCGGC
CGTCAATCTCGCCGAGTACTAGTGCCGCCGCGAGTGCGAATTCCCCCCTT
CCTCCTGCTGCTGCTGCGGCTGCGGCTGCGGCTGGCGCATACGCCTCTGT
TTCCGCTGCGACGACTCTCCCAGGGTGTACTACGGCAACAGCAGCAGGAT
ATCTCTCGCCACCACCAATCGCATCCCTCCCGCCATCATTCTGCTCCATG
GCCGCCACCCATGACAGCATGGCCATGGCCATGGCGAATCCATTGCTTGT
GGACGCGCATCGCATGTACAGCGACCTGGCCGTATCCTTTGCAGATAGCA
ATGCCATCTACGCGCTCGATGAAATGGGATTAGATGACGTCAGTGCGACA
ATGCTCGCGGCAGATCCCGTCTTCCAGGGGAACGATTGGGATTGGTTACA
CGACGATCACCACGATGGTGGTGTGCTCTAA
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Coding sequence (CDS) from alignment at ch5:68051..68931+

>KJC3_006678-T1 ID=KJC3_006678-T1|Name=KJC3_006678-T1|organism=Aspergillus niger KJC3|type=CDS|length=2151bp|location=Sequence derived from alignment at ch5:68051..68931+ (Aspergillus niger KJC3)
ATGCTCATCGACGGCGAAAAGTGGGCATGTGAAGCTTGTGTCCGCGGCCA
TCGTGTGACCACCTGCAAACACAATGATCGACCCCTAATCCGCATCAACC
GCAAAGGTCGTCCCTTTGCGACCTGCTCCATCTGCAACTGCACTCCCTGC
GAAAGCCCCGAAGAGCACGCCAAGCTCAAACGTGAGACCGAACATCATCA
TCCTTCTTCATCCTCAAAACGAGCTGCTGGCCGTTCTCCGCGACTCTCGG
CGTCTCCGACGACCTTTTTACCCATTGCGCCGCGGCCGTCAATCTCGCCG
AGTACTAGTGCCGCCGCGAGTGCGAATTCCCCCCTTCCTCCTGCTGCTGC
TGCGGCTGCGGCTGCGGCTGGCGCATACGCCTCTGTTTCCGCTGCGACGA
CTCTCCCAGGGTGTACTACGGCAACAGCAGCAGGATATCTCTCGCCACCA
CCAATCGCATCCCTCCCGCCATCATTCTGCTCCATGGCCGCCACCCATGA
CAGCATGGCCATGGCCATGGCGAATCCATTGCTTGTGGACGCGCATCGCA
TGTACAGCGACCTGGCCGTATCCTTTGCAGATAGCAATGCCATCTACGCG
CTCGATGAAATGGGATTAGATGACGTCAGTGCGACAATGCTCGCGGCAGA
TCCCGTCTTCCAGGGGAACGATTGGGATTGGTTACACGACGATCACCACG
ATGGTGGTGTGCTCTAAATGCTCATCGACGGCGAAAAGTGGGCATGTGAA
GCTTGTGTCCGCGGCCATCGTGTGACCACCTGCAAACACAATGATCGACC
CCTAATCCGCATCAACCGCAAAGGTCGTCCCTTTGCGACCTGCTCCATCT
GCAACTGCACTCCCTGCGAAAGCCCCGAAGAGCACGCCAAGCTCAAACGT
GAGACCGAACATCATCATCCTTCTTCATCCTCAAAACGAGCTGCTGGCCG
TTCTCCGCGACTCTCGGCGTCTCCGACGACCTTTTTACCCATTGCGCCGC
GGCCGTCAATCTCGCCGAGTACTAGTGCCGCCGCGAGTGCGAATTCCCCC
CTTCCTCCTGCTGCTGCTGCGGCTGCGGCTGCGGCTGGCGCATACGCCTC
TGTTTCCGCTGCGACGACTCTCCCAGGGTGTACTACGGCAACAGCAGCAG
GATATCTCTCGCCACCACCAATCGCATCCCTCCCGCCATCATTCTGCTCC
ATGGCCGCCACCCATGACAGCATGGCCATGGCCATGGCGAATCCATTGCT
TGTGGACGCGCATCGCATGTACAGCGACCTGGCCGTATCCTTTGCAGATA
GCAATGCCATCTACGCGCTCGATGAAATGGGATTAGATGACGTCAGTGCG
ACAATGCTCGCGGCAGATCCCGTCTTCCAGGGGAACGATTGGGATTGGTT
ACACGACGATCACCACGATGGTGGTGTGCTCTAAATGCTCATCGACGGCG
AAAAGTGGGCATGTGAAGCTTGTGTCCGCGGCCATCGTGTGACCACCTGC
AAACACAATGATCGACCCCTAATCCGCATCAACCGCAAAGGTCGTCCCTT
TGCGACCTGCTCCATCTGCAACTGCACTCCCTGCGAAAGCCCCGAAGAGC
ACGCCAAGCTCAAACGTGAGACCGAACATCATCATCCTTCTTCATCCTCA
AAACGAGCTGCTGGCCGTTCTCCGCGACTCTCGGCGTCTCCGACGACCTT
TTTACCCATTGCGCCGCGGCCGTCAATCTCGCCGAGTACTAGTGCCGCCG
CGAGTGCGAATTCCCCCCTTCCTCCTGCTGCTGCTGCGGCTGCGGCTGCG
GCTGGCGCATACGCCTCTGTTTCCGCTGCGACGACTCTCCCAGGGTGTAC
TACGGCAACAGCAGCAGGATATCTCTCGCCACCACCAATCGCATCCCTCC
CGCCATCATTCTGCTCCATGGCCGCCACCCATGACAGCATGGCCATGGCC
ATGGCGAATCCATTGCTTGTGGACGCGCATCGCATGTACAGCGACCTGGC
CGTATCCTTTGCAGATAGCAATGCCATCTACGCGCTCGATGAAATGGGAT
TAGATGACGTCAGTGCGACAATGCTCGCGGCAGATCCCGTCTTCCAGGGG
AACGATTGGGATTGGTTACACGACGATCACCACGATGGTGGTGTGCTCTA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006678KJC3_006678Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006678-T1.exon1KJC3_006678-T1.exon1Aspergillus niger KJC3exon
KJC3_006678-T1.exon2KJC3_006678-T1.exon2Aspergillus niger KJC3exon
KJC3_006678-T1.exon3KJC3_006678-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006678-T1.cdsKJC3_006678-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006678-T1KJC3_006678-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036395
DBxrefInterPro:IPR001083
DBxrefPFAM:PF00649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:68051..68931 +
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